京都大学 / 0048 / 新制・課程博士 / 博士(医学) / 甲第17974号 / 医博第3838号 / 新制||医||1001(附属図書館) / 80818 / 京都大学大学院医学研究科医学専攻 / (主査)教授 羽賀 博典, 教授 坂井 義治, 教授 千葉 勉 / 学位規則第4条第1項該当 / Doctor of Medical Science / Kyoto University / DFAM

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Heterogeneous reactions between gas-phase oxidants and particulate-phase organic compounds impact many important atmospheric chemical processes. For example, little is known about the reaction dynamics of gaseous oxidants with organic compounds found in the atmosphere. The first step of the reaction between gaseous ozone and solid pentacene was investigated using Reflection Absorption Infrared Spectroscopy (RAIRS). Ozone was found to add to pentacene non-selectively and form a range of products after heavy ozone exposure. The rate limiting step had an activation energy of 17 kJ/mol, which is consistent with the findings of previous ozone oxidation studies for the cleavage of a carbon-carbon double bond. Unfortunately the products could not be used to distinguish between probable reaction mechanisms. Hydroxyl radicals (•OH) play a major role processing atmospheric hydrocarbons. Due to their short lifetimes, not much is known about the dynamics of the first steps of •OH reactions. To investigate these reactions, a rotational state-selector was constructed to filter a molecular beam of •OH for reaction dynamics investigations with organic surfaces. The rotational state-selector was designed to leverage the linear Stark effect to pass only suitable molecules in a particular rotational state and block the flow of any other atoms, molecules and ions in a molecular beam. The state-selector was validated and used to positively deflect molecular beams of methyl iodide and D₂O via the linear Stark effect. Future studies with the rotational state-selector will investigate the initial steps of •OH reactions with solid organic compounds. / Master of Science

Oxidative processes are linked to a number of major disease states as well as the breakdown of many materials. Of particular importance are reactive oxygen species (ROS), as they are known to be endogenously produced in biological systems as well as exogenously produced through a variety of different means. In hopes of better understanding what controls the behavior of ROS, researchers have studied radical chemistry on a fundamental level. Fundamental knowledge of what contributes to oxidative processes can be extrapolated to more complex biological or macromolecular systems. Fundamental concepts and applied data (i.e. interaction of ROS with polymers, biomolecules, etc.) are critical to understanding the reactivity of ROS. A detailed review of the literature, focusing primarily on the hydroxyl radical (HO•) and hydrogen atom (H•) abstraction reactions, is presented in Chapter 1. Also reviewed herein is the literature concerning high density polyethylene (HDPE) degradation. Exposure to treated water systems is known to greatly reduce the lifetime of HDPE pipe. While there is no consensus on what leads to HDPE breakdown, evidence suggests oxidative processes are at play. The research which follows in Chapter 2 focuses on the reactivity of the hydroxyl radical and how it is controlled by its environment. The HO• has been thought to react instantaneously, approaching the diffusion controlled rate and showing little to no selectivity. Both experimental and calculational evidence suggest that some of the previous assumptions regarding hydroxyl radical reactivity are wrong and that it is decidedly less reactive in an aprotic polar solvent than in aqueous solution. These findings are explained on the basis of a polarized transition state that can be stabilized via the hydrogen bonding afforded by water. Experimental and calculational evidence also suggest that the degree of polarization in the transition state will determine the magnitude of this solvent effect. Chapter 3 discusses the results of HDPE degradation studies. While HDPE is an extremely stable polymer, exposure to chlorinated aqueous conditions severely reduces the lifetime of HDPE pipes. While much research exists detailing the mechanical breakdown and failure of these pipes under said conditions, a gap still exists in defining the species responsible or mechanism for this degradation. Experimental evidence put forth in this dissertation suggests that this is due to an auto-oxidative process initiated by free radicals in the chlorinated aqueous solution and propagated through singlet oxygen from the environment. A mechanism for HDPE degradation is proposed and discussed. Additionally two small molecules, 2,3-dichloro-2-methylbutane and 3-chloro-1,1-di-methylpropanol, have been suggested as HDPE byproducts. While the mechanism of formation for these products is still elusive, evidence concerning their identification and production in HDPE and PE oligomers is discussed. Finally, Chapter 4 deals with concluding remarks of the aforementioned work. Future work needed to enhance and further the results published herein is also addressed. / Ph. D.

Dissolution of the UO2 matrix is one of the potential routes for radionuclide release in a future deep geological repository for spent nuclear fuel. This doctoral thesis focuses on interfacial reactions of relevance in radiation-induced dissolution of UO2 and is divided in two parts: In the first part, we sought to explore the effects of solid phase composition: The impact of surface stoichiometry on the reactivity of UO2 towards aqueous radiolytic oxidants was studied. H2O2 reacts substantially faster with stoichiometric UO2 than with hyperstoichiometric UO2. In addition, the release of uranium from stoichiometric UO2 is lower than from hyperstoichiometric UO2. The behavior of stoichiometric powder changes with exposure to H2O2, approaching the behavior of hyperstoichiometric UO2 with the number of consecutive H2O2 additions. The impact of Gd-doping on the oxidative dissolution of UO2 in an aqueous system was investigated. A significant decrease in uranium dissolution and higher stability towards H2O2 for (U,Gd)O2 pellets compared to standard UO2 was found. In the second part, we sought to look at the effect of external factors: The surface reactivity of H2 and O2 was studied to understand the overall oxide surface reactivity of aqueous molecular radiolysis products. The results showed that hydrogen-abstracting radicals and H2O2 are formed in these systems. Identical experiments performed in aqueous systems containing UO2 powder showed that the simultaneous presence of H2 and O2 enhances the oxidative dissolution of UO2 compared to a system not containing H2. The effect of groundwater components such as bentonite and sulfide on the oxidative dissolution of UO2 was also explored. The presence of bentonite and sulfide in water could either delay or prevent in part the release of uranium to the environment. The Pd catalyzed H2 effect is more powerful than the sulfide effect. The poisoning of Pd catalyst is not observed under the conditions studied. / <p>QC 20170421</p>

The DMPO type spin trap 5,5-Dimethyl-1-pyrroline N-oxide (DMPO) and the exceptionally similar spin trap 2-ethoxycarbonyl-2-methyl-3,4-dihydro-2H-pyrrole-l-oxide (EMPO) are widely studied in computational and theoretical works. This particular study examines the addition reactions that both these molecules undergo with the carcinogenic hydroxyl radical. This work used a relatively new approximation method, called the correlation consistent composite approach or ccCA, for carrying out quantum mechanical calculations to give the free energies of the products and reactants of the reactions. The free energies are to be used to extrapolate the rate constants of the reactions from the Arrhenius equation. Though both the spin traps studied have been widely examined and assessed in both theoretical and experimental work, accurately calculated rate constants have not been previously obtained using computational methods. The results obtained here will help to assess the efficiency and the accuracy of the ccCA method, as well as lead to the design of better, more novel spin traps.

Cette thèse porte sur l'influence de la couche limite convective et nuageuse sur la réactivité chimique en Afrique de l'Ouest. Pour répondre à cette question, des simulations à haute résolution (50m) sont réalisées sur le modèle atmosphérique Méso-NH couplé à un mécanisme chimique détaillé représentant la chimie gazeuse et aqueuse. Cette échelle spatiale permet de représenter explicitement les caractéristiques spatiales et temporelles des structures turbulentes. Les thermiques en couche limite sont identifiés à l'aide d'un échantillonnage conditionnel basé sur l'utilisation d'un traceur passif à décroissance radioactive. L'impact du transport turbulent sur la redistribution d'espèces chimiques dépend du temps de vie chimique de ces espèces. La ségrégation spatiale créée au sein de la couche limite augmente ou réduit les taux de réaction moyens entre composés. La campagne de terrain AMMA, et plus récemment DACCIWA, sont utilisées pour définir des forçages dynamiques et chimiques pour des environnements simulés. Le premier est représentatif d'un environnement biogénique dominé par des émissions naturelles de COV. Le second reproduit un environnement urbain modérément pollué typique du Golfe de Guinée (Cotonou au Bénin). Pour simplifier, l'analyse des simulations est limitée aux réactions chimiques entre OH et l'isoprène dans le cas biogénique, entre les aldéhydes C>2 et OH dans le cas urbain. L'influence de la couche limite convective est étudiée à l'échelle du thermique et du domaine. Cela permet une connexion avec les modèles à résolution plus lâche qui adoptent une hypothèse de mélange parfait et immédiat, négligeant de fait les variabilités spatiales de composés chimiques au sein d'une maille. Les premiers résultats, basés sur la phase gazeuse uniquement, montrent que les nuages en couche limite convective affectent le transport vertical d'espèces chimiques. Les thermiques sont des zones de réactions privilégiées où la réactivité chimique est maximale. La plus grande intensité de ségrégation est calculée au sommet de la couche limite, toutefois de signes opposés entre les deux environnements. En environnement biogénique, le mélange non-homogène de l'isoprène et de OH dans cette zone induit une diminution maximale de 30% du taux de réaction moyen. Dans le cas urbain, la constante de réaction effective entre OH et les aldéhydes est supérieure de 16% à la constante moyenne. La réactivité de OH est supérieure de 15 à 40% dans les thermiques comparé au reste du domaine, dépendant de l'environnement chimique et de l'heure. Comme les thermiques occupent une faible portion du domaine, l'impact des structures turbulentes sur la réactivité totale de OH est une diminution de 9% pour le cas biogénique et une augmentation maximale de 5% dans le cas anthropique. Des simulations LES incluant la réactivité aqueuse révèlent une baisse importante des rapports de mélange de OH associée à la présence de nuages. / This thesis focuses on the influence of the convective and cloudy boundary layer on the chemical reactivity in West Africa. To answer this question, high resolution simulations (50m) are performed on the atmospheric model Meso-NH coupled to a detailed chemical scheme representing the gaseous and aqueous phases. This spatial scale allow to explicitly represent the spatial and temporal characteristics of turbulent structures. Thermals in the boundary layer are identified by a conditional sampling based on a radioactive-decay passive scalar. The turbulent transport influence on the redistribution of chemical species depends on the chemical lifetimes of these species. Spatial segregation is created within the convective boundary layer that increases or decreases the mean reaction rates between compounds. AMMA campaign field study, and more recently DACCIWA, are used to define dynamical and chemical forcing of two simulated environments. The first one is representative of a biogenic environment dominated by natural emissions of VOC. The second reproduces a moderately polluted typical urban area of the Guinean Gulf (Cotonou in Benin). For the sake of simplicity, simulations analysis are limited to the chemical reaction between isoprene and OH in the biogenic case, and the reaction between C>2 aldehydes and OH in the anthropogenic case. The convective boundary layer influence is studied at thermal and domain scale. This makes the connection with coarse resolution models for which a hypothesis of perfect and immediate mixing is made, neglecting the spatial variability of chemical species within a grid cell. The first results are based on the gaseous phase only. Cloudy development in the convective boundary layer only affects the vertical transport of chemical species. The simulations show that thermals are preferential reaction zones where the chemical reactivity is the highest. The top of the boundary layer is the region characterized by the highest calculated segregation intensities but of the opposite sign in both environments. In the biogenic environment, the inhomogeneous mixing of isoprene and OH in this zone leads to a maximum decrease of 30% of the mean reaction rate. In the anthropogenic case, the effective rate constant for OH reacting with aldehydes is 16% higher at maximum than the averaged value. The OH reactivity is higher by 15 to 40% inside thermals compared to the surroundings depending on the chemical environment and time of the day. Because thermals occupy a small fraction of the simulated domain, the impact of turbulent motions on the domain-averaged OH total reactivity reaches a maximum 9% decrease for the biogenic case and a maximum of 5% increase for the anthropogenic case. LES simulations including the aqueous reactivity reveal a significant decrease in OH mixing ratios associated to the presence of clouds. Consequently, isoprene and C>2 aldehydes mixing ratios increase at these altitudes.