Les interactions non-Covalentes entre des protéines et des polysaccharides anioniques tels que les glycosaminoglycanes (GAGs) interviennent dans de nombreux processus physio-Pathologiques tels que la signalisation, la reconnaissance cellulaire, les infections bactériennes et virales ou lors de la progression des cancers. Une des difficultés pour comprendre les mécanismes moléculaires mis en jeu lors de ces interactions réside dans le déchiffrage des informations structurales contenues dans les GAGs. Cette tâche est délicate, surtout en raison du degré variable d'acétylations et de sulfatations de ces GAG's, constituant des limitations importantes pour l'avancée des recherches en glycobiologie. Pour contourner ces restrictions, des méthodes analytiques fines et innovantes, telles que la spectrométrie de masse (MS) offrent de nombreux avantages. Durant cette thèse, trois approches originales basées sur la MS ont été developpées. La première a consisté à synthétiser de nouvelles matrices ioniques liquides limitant la désulfatation et favorisant l'obtention de dépôt homogène pour l'analyse par UV-MALDI-TOF. La seconde a montré le potentiel d'une méthode d'ionisation douce récemment introduite, la désorption ionisation assistée par électronébulisation (DESI) permettant l'analyse directe et en conditions ambiantes d'oligosaccharides anioniques seuls ou sous forme de complexes avec une protéine. Enfin, la troisième a nécessité la fabrication de puces à protéines ou à saccharides pour lanalyse de complexes protéines/GAG en utilisant le couplage de la résonance plasmonique de surface avec la MS (SPR-MS). Ce couplage permet d'effectuer le suivi en temps réel de la formation de complexes entre des protéines et des GAGs, d'en déterminer les constantes de la dissociation, puis de détecter directement par UV-MALDI-TOF les ligands, qu'ils soient de nature protéique ou saccharidique. / The non-Covalent interactions between proteins and anionic polysaccharides such as glycosaminoglycans (GAGs) are involved in several physio-Pathological processes such as cell signalling and recognition, bacterial and viral infections or during cancer progression. One of the obstacles to get the molecular mechanisms involved during these interactions hold in the structural information deciphering within GAG's sequences. This task is delicate especially because of variable level of acetylations and sulfations, constituting important bottleneck in the research advances of the glycobiology field. To bypass these restrictions, accurate and innovative analytical methods such as mass spectrometry (MS) provide numerous advantages. During this Ph.D training, three original MS based approaches have been developed. The first dealt with the synthesis of new ionic liquid matrices, which both restrict desulfation process and favour the homogeneous deposits for UV-MALDI-TOF analysis. The second way used a soft recently introduced ionization method, desorption electrospray ionization (DESI) allowing direct analysis in ambient conditions of anionic oligosaccharides or under complexes with protein. Finally, the third involved the making of protein or saccharide chips for the analysis of protein / GAG complexes using the hyphenation of surpface plasmon resonance with MS (SPR-MS). Thos coupling allows real time monitoring protein / GAG complexes formation, their dissociation constant determination and the direct detection of protéic as wall as saccharidic ligands by UV-MALDI-TOF.

In recent years there has been increasing interest in novel forms of surfactants. Of particular interest are gemini surfactants, which consist of two conventional surfactants joined by a spacer at the head groups, as they exhibit lower critical micelle concentrations than can be achieved by conventional surfactants. In this work, the self-assembly behaviour of several nonionic gemini surfactants with polyethylene oxide head groups (GemnEm, where n (= 20) is the number of carbons per tail and m (= 10, 15, 20 and 30) is the number of ethylene oxides per head group) were investigated. The Critical Micelle Concentrations (CMCs) were measured using a fluorescence probe technique. The CMCs are all ~2 x 10?7 M, with almost no variation with m. The CMCs are several orders of magnitude lower than conventional C12Em nonionic surfactants. The mixing behaviour of the gemini surfactants with conventional surfactants was also studied. They obeyed ideal mixing behaviour with both ionic and nonionic surfactants. Micelle morphologies were studied using Small Angle Neutron Scattering. The gemini surfactants with the larger head groups (i.e. Gem20E20 and Gem20E30) formed spherical micelles. Gem20E15 showed strong scattering at low Q, characteristic of elongated micelles. As the temperature was increased towards the cloud point, the scattering approached the Q-1 dependence predicted for infinite, straight rods. The existence of anisotropic micelles was supported by the viscosity of Gem20E15, which increases by several orders of magnitude on heating towards its cloud point. Phase behaviour was determined using Diffusive Interfacial Transport coupled to near-infrared spectroscopy. Much of the behaviour of these systems is similar to conventional nonionic surfactants. For example, Gem20E10 forms a dilute liquid isotropic phase (W) coexisting with a concentrated lamellar phase (La) at around room temperature and forms a sponge phase at higher temperatures. This is similar to the behaviour of C12E3 and C12E4. The other surfactants studied are all quite soluble in water and form liquid isotropic and hexagonal phases from room temperature. At higher concentrations Gem20E15 formed a cubic and then a lamellar phase while Gem20E20 formed a cubic phase and then an intermediate phase. This is also comparable to the phase behaviour of conventional nonionic surfactants except the intermediate phase, which is often only observed for surfactant systems with long alkyl tails.

Sorption of non-ionic organic compounds to organic matter is usually characterized as a partitioning interaction, which is quantified by K [subscript]oc, the organic-C normalized partitioning coefficient. However K [subscript]oc for any single compound varies considerably between soils, often by a factor of 3-10. This study addresses some of the potential causes of this variability. Forty-four soil cores were collected from a 2 ha paddock. Ten of these cores were selected for sorption measurements. The chemical composition of the soil organic matter (SOM) was determined using ¹³C NMR analysis. It was found that K [subscript]oc for diuron was positively correlated with aryl C (r² = 0.59) and negatively correlated with O-alkyl C (r² = 0.84). There were no such correlations for phenanthrene K [subscript]oc. A second set of experiments was carried out to investigate the effects of SOM– mineral interactions on the sorption properties of a selection of the soils. It was found that HF-treatment increased K [subscript]oc for both phenanthrene and diuron. The HF treatment removes mineral matter leaving the organic phase unaffected by the treatment. The increase in K [subscript]oc on HF-treatment soils provides strong evidence that interactions between organic matter and soil minerals block organic matter sorption sites. Furthermore, following HF-treatment, there was a positive correlation between K [subscript]oc for phenanthrene and aryl C and carbonyl C and a negative correlation with O-alkyl C. This suggests that the non-constancy of the relationship between organic matter chemistry and K [subscript]oc, for whole soils in the case of phenanthrene, may be a consequence of variability of the effect of organic matter-mineral interactions on K [subscript]oc. The influence of lipids on the sorption of diuron and phenanthrene to soils was also investigated. Lipids are known to cover the surfaces of organic matter in soil. K [subscript]oc for diuron and phenanthrene were consistently higher for the lipid-extracted soils than for the whole soils (average of 31% for diuron and 29% for phenanthrene), indicating that lipids block sorption sites on the organic matter. Sorption experiments on one pair of HF-treated soils indicated that the blocking effects of minerals and lipids are independent, because lipid extraction and HF-treatment combined increased K [subscript]oc by more than either treatment alone. In the last experiment, the effect of solvent conditioning on the sorption of diuron and phenanthrene was investigated. The K [subscript]oc values for compounds were consistently higher for solvent-treated whole soil and lipid-extracted soil than corresponding soils before solvent treatment. Solid-state ¹³C NMR spectra of the solvent-treated soils indicated that there were no significant changes in the chemical structure of SOM caused by solvent treatment. Solvent treatment changes the physical conformation of the SOM, increasing its sorption affinity. The key findings from the research are: • Variations in sorption affinity for diuron are related to differences in the soil organic matter chemistry. • SOM-mineral interactions can have a substantial influence on K [subscript]oc for non- ionic compounds. • Lipids may block the active sorption sites on the SOM thereby diminishing sorption overall. • Solvent conditioning can change the physical conformation of SOM and lead to enhancement sorption of diuron and phenanthrene. / http://proxy.library.adelaide.edu.au/login?url= http://library.adelaide.edu.au/cgi-bin/Pwebrecon.cgi?BBID=1372068 / Thesis (Ph.D.) - University of Adelaide, School of Earth and Environmental Sciences, 2009

This research is focused on development of routes towards the rational design of nanoparticle catalysts. Primarily, it is focused on two main projects; (1) the use of imidazolium-based ionic liquids (ILs) as greener media for the design of quasi-homogeneous nanoparticle catalysts and (2) the rational design of heterogeneous-supported nanoparticle catalysts from structured nanoparticle precursors. Each project has different studies associated with the main objective of the design of nanoparticle catalysts.<p> In the first project, imidazolium-based ionic liquids have been used for the synthesis of nanoparticle catalysts. In particular, studies on recyclability, reuse, mode-of-stability, and long-term stability of these ionic-liquid supported nanoparticle catalysts have been done; all of which are important factors in determining the overall greenness of such synthetic routes. Three papers have been published/submitted for this project. In the first publication, highly stable polymer-stabilized Au, Pd and bimetallic Au-Pd nanoparticle catalysts have been synthesized in imidazolium-based 1-butyl-3-methylimidazolium hexafluorophosphate ([BMIM]PF6) ionic liquid (Journal of Molecular Catalysis A: Chemical, 2008, 286, 114). The resulting nanoparticles were found to be effective and selective quasi-homogeneous catalysts towards a wide-range of hydrogenation reactions and the catalyst solution was reused for further catalytic reactions with minimal loss in activity. The synthesis of very pure and clean ILs has allowed a platform to study the effects of impurities in the imidazolium ILs on nanoparticle stability. In a later study, a new mode of stabilization was postulated where the presence of low amounts of 1-methylimidazole has substantial effects on the resulting stability of Au and Pd-Au nanoparticles in these ILs (Chemical Communications, 2009, 812). In further continuation of this study, a comparative study involving four stabilization protocols for nanoparticle stabilization in BMIMPF6 IL is described, and have shown that nanoparticle stability and catalytic activity of nanoparticles is dependent on the overall stability of the nanoparticles towards aggregation (manuscript submitted).<p> The second major project is focused on synthesizing structurally well-defined supported catalysts by incorporating the nanoparticle precursors (both alloy and core shell) into oxide frameworks (TiO2 and Al2O3), and examining their structure-property relationships and catalytic activity. a full article has been published on this project (Journal of Physical Chemistry C, 2009, 113, 12719) in which a route to rationally design supported catalysts from structured nanoparticle precursors with precise control over size, composition, and internal structure of the nanoparticles has been shown. In a continuation of this methodology for the synthesis of heterogeneous catalysts, efforts were carried out to apply the same methodology in imidazolium-based ILs as a one-pot media for the synthesis of supported-nanoparticle heterogeneous catalysts via the trapping of pre-synthesized nanoparticles into porous inorganic oxide materials. Nanoparticle catalysts in highly porous titania supports were synthesized using this methodology (manuscript to be submitted).

DNA has been widely studied in a variety of solvents. The majority of these solvents consist of either aqueous or organic components. The presence of ions or salts in these solvents can further alter DNA properties by changing the melting point or helical structure. The size, charge, and concentration of these additional components can all affect the behaviour of DNA. A new class of solvents, known as ionic liquids have recently gained popularity. Ionic liquids are comprised of entirely of ions and can be liquid at room temperature. Due to their low volatility and ability to dissolve both polar and non-polar substances, they are generating high levels of interest as ‘green solvents’. Although the interaction between DNA and ionic liquids has been characterized, the potential of this interaction is still being studied. It was discovered that when DNA mixed with DNA intercalating dyes was added to ionic liquids, there was a large reduction in fluorescence. Although this fluorescence drop was believed to occur to removal of the dye molecule from the helix, the strength of this interaction has not been researched. In this thesis, the interaction between different intercalating dyes and different ionic liquids was evaluated. We reasoned that perhaps the difference in interaction could be used as a method of separating the DNA-dye complex, which has previously never been accomplished. For example, it has been established that both DNA and cationic dyes have an affinity for ionic liquids. The relative strength of this affinity is undetermined, as well as the comparison to normal aqueous mediums. Although ionic liquids can drastically alter the stability of the DNA duplex by either raising or decreasing the melting point depending on the ionic liquid chosen, we found that the DNA actually has a higher affinity for the aqueous phase. Conversely, intercalating dyes prefer to partition into the ionic phase. The relative affinities of the two components are strong enough for their respective phases that the complex can be split apart and each component can be extracted, allowing for separation of the two.

This research is focused on development of routes towards the rational design of nanoparticle catalysts. Primarily, it is focused on two main projects; (1) the use of imidazolium-based ionic liquids (ILs) as greener media for the design of quasi-homogeneous nanoparticle catalysts and (2) the rational design of heterogeneous-supported nanoparticle catalysts from structured nanoparticle precursors. Each project has different studies associated with the main objective of the design of nanoparticle catalysts.<p> In the first project, imidazolium-based ionic liquids have been used for the synthesis of nanoparticle catalysts. In particular, studies on recyclability, reuse, mode-of-stability, and long-term stability of these ionic-liquid supported nanoparticle catalysts have been done; all of which are important factors in determining the overall greenness of such synthetic routes. Three papers have been published/submitted for this project. In the first publication, highly stable polymer-stabilized Au, Pd and bimetallic Au-Pd nanoparticle catalysts have been synthesized in imidazolium-based 1-butyl-3-methylimidazolium hexafluorophosphate ([BMIM]PF6) ionic liquid (Journal of Molecular Catalysis A: Chemical, 2008, 286, 114). The resulting nanoparticles were found to be effective and selective quasi-homogeneous catalysts towards a wide-range of hydrogenation reactions and the catalyst solution was reused for further catalytic reactions with minimal loss in activity. The synthesis of very pure and clean ILs has allowed a platform to study the effects of impurities in the imidazolium ILs on nanoparticle stability. In a later study, a new mode of stabilization was postulated where the presence of low amounts of 1-methylimidazole has substantial effects on the resulting stability of Au and Pd-Au nanoparticles in these ILs (Chemical Communications, 2009, 812). In further continuation of this study, a comparative study involving four stabilization protocols for nanoparticle stabilization in BMIMPF6 IL is described, and have shown that nanoparticle stability and catalytic activity of nanoparticles is dependent on the overall stability of the nanoparticles towards aggregation (manuscript submitted).<p> The second major project is focused on synthesizing structurally well-defined supported catalysts by incorporating the nanoparticle precursors (both alloy and core shell) into oxide frameworks (TiO2 and Al2O3), and examining their structure-property relationships and catalytic activity. a full article has been published on this project (Journal of Physical Chemistry C, 2009, 113, 12719) in which a route to rationally design supported catalysts from structured nanoparticle precursors with precise control over size, composition, and internal structure of the nanoparticles has been shown. In a continuation of this methodology for the synthesis of heterogeneous catalysts, efforts were carried out to apply the same methodology in imidazolium-based ILs as a one-pot media for the synthesis of supported-nanoparticle heterogeneous catalysts via the trapping of pre-synthesized nanoparticles into porous inorganic oxide materials. Nanoparticle catalysts in highly porous titania supports were synthesized using this methodology (manuscript to be submitted).

Recently, there has been increased effort in researching methods for producing hollow nanostructures because of their potential impact in the fields of catalysis, separation processes, drug delivery, and energy storage and conversion devices. The purpose of this thesis is to describe a method for forming hollow inorganic-organic hybrid nanoboxes and nanoframes. This approach relies upon ionic liquid (1-butyl-3-methyl-imidazolium chloride) mediated auto-templating assembly of CaCO3 and chitosan to form nanoframes (two open faces) and nanoboxes (one open face). The average dimension of the nanostructures formed was 339 ± 95 x 299 ± 89 nm. Detailed structure of nanoboxes and nanoframes were obtained by 3-D electron tomography and X-ray diffraction. Chemical bonding was determined by FTIR, and the ratio of organics to inorganics in the nanostructures was determined by thermal gravimetric analysis. The chitosan to CaCO3 weigh ratio, mixing strength, temperature, and dialysis time were varied to further elucidate the method of formation. It was found that increasing the mixing power caused the equilibrium nanostructure dimension to decrease. On the other hand, varying the experimental temperature in the range of 80 to 160˚C did not affect the nanostructure dimension. The dialysis study showed that during dialysis the nanostructure core was increasingly removed. Nanoframes were observed after 72 hours of dialysis. With further dialysis, there was continued erosion of nanoframes. Results indicate that the concentration gradient and the solubility difference between the mixture components were responsible for this transformation.

ABSTRACT A water-soluble rigid-rod polyelectrolyte sPBI-PS(Li+) could be doped with LiI and cast as a freestanding film from aqueous solution showing a room-temperature in-plane DC conductivity (s|| ) of 8.3¢®10-3 S/cm. However, the cast film assumed an anisotropic microstructure due to preferential orientation of the rigid-rod backbone leading to an out-of-the plane DC conductivity (s^) which was three orders smaller than those of the s||, and severely limited its applications as a solid polyelectrolyte for thin-film battery. In addition to synthesizing rigid-rod polyelectrolyte sPBI-PS(Li+) for comparison, this study used 2-sulfo-terephthalic acid and isophthalic acid in ratios of 15¡G1, 25¡G1, or 50¡G1 for copolycondensation reaction making the rigid-rod backbone of sPBI-PS(Li+) become articulated. Further reaction with 1,3-propanesultone pendants, the rigid-rod polyelectrolyte was changed into a new water-soluble articulated rigid-rod polyelectrolyte A-sPBI-PS(Li+). Various analyses were applied to ascertain chemical structure, purities, thermal properties and molecular weight of synthesized monomers and polymers. Freestanding films of sPBI-PS(Li+) and A-sPBI-PS(Li+) were cast from aqueous solutions doped with LiI, LiBF4, or LiCF3SO3 for various concentrations up to 5 wt.%. Thin-film room-temperature s|| of sPBI-PS(Li+) could be 3.15&#x00B4;10-3 S/cm, and of A-sPBI-PS(Li+) could be 2.76&#x00B4;10-3 S/cm. X-ray scattering and electron microscopic results suggested that the sPBI-PS(Li+) cast film was in-plane isotropic but out-of-the plane anisotropic, and the A-sPBI-PS(Li+) cast film was three-dimensionally isotropic.

A water-soluble rigid-rod polyelectrolyte sPBI-PS(Li+) could be doped with LiI and cast as a freestanding film from aqueous solution showing a room-temperature in-plane DC conductivity (

ABSTRACT sPBI is a heterocyclic aromatic polymer assuming a para- catenated backbone yielding a rod-like configuration. Because of its rigidity, this rod-like molecule displays superior mechanical tenacity, thermo-oxidative stability, and solvent resistance. It is also the precursor of rigid-rod solid polyelectrolyte exhibiting high solubility and superior ionic conductivity. Isotropic solution were prepared by dissolving sPBI in distilled methanesulfonic acid containing 0.0, 0.989, 4.76, 9.09, 15.0, 20.0, 23.1 wt. % lithium ion of dopants of LiCF3SO3 or LiN(CF3SO2)2. The room-temperature DC conductivity of sPBI cast film doped with 15.0 wt. % LiN(CF3SO2)2 parallel (