Exotic invasive plant species can alter aquatic habitats potentially influencing the macroinvertebrate community and foraging fishes. Therefore, I investigated the hypothesis that Hydrilla verticillata will alter habitat important to macroinvertebrate community structure and bluegill foraging efficiency. Studies were conducted in ponds and aquaria. At the pond level, macroinvertebrate abundance, richness, and biomass in a hydrilla-dominated habitat did not differ significantly from a diverse plant habitat. Indicator taxa did differ significantly between respective treatments. The data suggest hydrilla beds may not provide increased macroinvertebrate abundance and richness compared to diverse plant beds as previously thought. In aquaria, habitat complexity (Ihv) and light transmittance were influenced by increasing the homogeneity of hydrilla in an aquatic bed habitat. In addition, bluegill foraging efficiency was affected negatively by increasing spatial complexity of a hydrilla dominated habitat. Therefore, a shift to a monotypic hydrilla habitat can alter macroinvertebrate community composition and impact bluegill foraging success.

Glacial lakes, such as those in the Midwest region of the United States, are ecologically and economically important, and they provide a wide range of ecosystem services, such as habitat for wildlife and fishes, flood control and recreational boating. Glacial lakes often support locally important sport fisheries, such as largemouth bass <i>Micropterus salmoides</i> and bluegill <i>Lepomis macrochirus</i>,<i> </i>which are partially dependent on suitable habitat within lakes. Nearshore vegetation is often removed by lakeshore landowners for perceived aesthetics and boat access, or by area managers as a form of indirect fisheries management and invasive species control. The connection between nearshore vegetation and fish population health, though widely studied is somewhat unclear. In the two research chapters of this thesis we attempted to further understanding of the environmental factors that influence vegetation abundance and distribution, how vegetation abundance and distribution influences fish population abundance and size structure, and how young-of-year (YOY) largemouth bass utilize habitats within the nearshore environment. In the first research chapter, we used structural equation modeling (SEM) and data collected by the Indiana Department of Natural Resources to quantify the complexity of relationships among catchment characteristics (e.g., catchment size), lake morphology, water quality, vegetation abundance and distribution, and fish population abundance and size structure. Across multiple lakes, lake productivity was more influential in explaining cross-lake variation of largemouth bass and bluegill proportional stock density (PSD) and largemouth bass catch per unit effort (CPUE) than vegetation. This may be a result of the feedback between phytoplankton production and rooted vegetation production. The models we constructed provide insights into the complexity of environmental variables that influence nearshore vegetation and fish populations. In the second research chapter we used stable isotopes (δ¹³ Carbon, δ¹⁵ Nitrogen, δ¹⁸ Oxygen and δ² Hydrogen) to examine the consistency of habitat use and foraging of YOY largemouth bass within Indiana glacial lakes. We observed spatial variation in stable isotope ratios of YOY largemouth bass between habitat types and sites. Additionally, there were significant, positive relationships between δ¹³C of locally collected potential prey items and δ¹³C of YOY largemouth bass suggesting localized foraging patterns. Later in the summer, as young bass grew in size and likely switched to piscivory, we did not observe similar spatial variation in young bass stable isotopes or spatial relationships between prey and the young bass suggesting more homogeneous foraging patterns. Understanding the habitat use patterns of young bass may allow for more efficient and effective management of the nearshore environment. Overall, a greater consideration for the complexity of relationships between nearshore habitat and fish populations may facilitate more effective management.

This study examines spatially continuous sampling data in order to investigate patterns of abundance and distribution of three recreationally important sunfish species (bluegill, redear, and spotted sunfish) along the main-stem of the Peace River, a large softwater river located in southwest Florida. A total of 467 electrofishing transects were sampled biannually from spring 2008 to spring 2010. Sampling sites ranged from the headwaters of the Peace River in Polk County, FL to the oligohaline waters located in Charlotte County, FL. All fish were collected with boat mounted electrofishing gear, and aquatic habitat and physiochemical water quality measurements were recorded at each transect. Pearson's correlation coefficient and conical correspondence analysis were used to interpret relationships between sunfish abundance and associated environmental variables. Results showed that relative abundance of sunfish varied significantly between the upper, middle, and lower basins of the river. Distance from headwaters, conductivity and macrophyte coverage were all significant predictors of relative species abundance. Spotted sunfish were found closer to the headwaters and were positively associated with higher amounts of aquatic vegetation. Redear were most common in the middle basin and were most associated with changes in conductivity. Bluegill were relatively more abundant further downriver where conductivities were higher. Woody debris was strongly associated with fish abundance for all species but did not significantly explain the variance in species composition between locations in the river. The result of this study can be used by fisheries professionals to better manage sunfish populations in the Peace River and other lotic systems.

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