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Development of an optogenetic toolkit for the interrogation of T cell signalling dynamicsHarris, Michael James January 2018 (has links)
T cells are a cornerstone of the mammalian adaptive immune system. A range of T-cell subsets exist that can orchestrate the overall immune response to pathogens or cancers, either by directly killing infected cells or licensing other cells to do so. Dysregulation of this important process can result in immunodeficiency or autoimmunity. Although T cells have been studied extensively over many decades, the detailed mechanisms underlying T-cell activation remain to be fully resolved. This thesis describes the development of new optogenetic approaches for the modulation of T-cell signalling dynamics and the interrogation of key events in T-cell activation to help investigate this question. Optogenetics is a rapidly emerging technique whereby light can be used to control the spatial and temporal activation, or inactivation of signalling pathways at unprecedented resolution. The methods described in this work utilise the blue light-responsive LOV2 photo-domain from the common oat A. Sativa, which is the foundation of the both the ‘LOVTRAP’ and ‘TULIPs’ optogenetic toolkits. T-cell antigen receptor (TCR) microclusters arise early during the interaction between T cells and antigen presenting cells (APCs). These TCR signalling platforms contain the proteins necessary for sustained T-cell activation, yet the processes underlying their formation and dissociation are still not fully characterised as they have been difficult to investigate with current chemical and genetic manipulations of T cells. Using two optogenetics systems combining either LOVTRAP or TULIPs and the microcluster- scaffolding protein LAT (Linker for the Activation of T cells), it was possible to modulate early T-cell signalling events and measure functional outputs in real-time. Unfortunately, the biological limitations of these LAT-based systems meant that they could not be used to quantitatively investigate microcluster formation. However, in an alternative approach, a drug-inducible, light-controllable chimeric antigen receptor was successfully developed that yielded important new insights into the rapid rate of signal decay within the TCR signalling pathway and the temporal dynamics of T-cell activation over several timescales. T cell-dependent bispecific antibodies (TDBs) are a new class of immuno-therapeutics that can specifically direct a T-cell response towards tumours, by crosslinking the TCR complex to a surface- expressed target on the cancerous cells. However, their mechanism of action has not been studied in detail. The close apposition of the T cell and target cells driven by the TDB interaction can result in the steric exclusion of phosphatases, such as CD45, away from the TCR at the TDB-generated cell-cell interface due to their large, rigid extracellular domains. Using the myeloma-expressed antigen, FcRH5, it was found that membrane-proximal epitopes of FcRH5 drive more robust TCR clustering and increased CD45 exclusion than membrane distal epitopes, which strongly correlated with effective killing of the target cell. These findings have important implications for therapeutic design and implementation of TDBs.
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A Novel Microspheres Composite Hydrogels Cross-linked by Methacrylated Gelatin Nanoparticles: Enhanced Mechanical Property and BiocompatibilityWang, Chunhua, Mu, C., Lin, W. 25 June 2019 (has links)
Content: Nowadays, protein-based nanoparticle as a biodegradable, biocompatible product attracts considerable interest for new uses in specialized technical areas. Gelatin is a denatured, biodegradable,
and nonimmunogenic protein obtained by controlled hydrolysis of the triple-helix structure of collagen into single-strain molecules. As an amphiphilic biopolymer, gelatin can easily assemble into different kinds of aggregates under the defined pH and temperature and the resulting gelatin nanoparticles have been developed to be applied in the food industry and biomedical fields. Herein we report a novel
macromolecular microsphere composites (MMC) hydrogels with the use of prepared methacrylated gelatin nanoparticles (MA-GNP) as the cross-linker. MA-GNP have the ability of chemical crosslinking by the
polymerization of C=C bonds, such that the composite hydrogels can be formed by radical polymerization of acrylamide (AAm) on the surface of MA-GNP. The smooth spherical particles with an average size of
~100 nm have been synthesized through a modified two-step desolvation method as proved by atomic force microscopy (AFM). The results of nuclear magnetic resonance and dynamic light scattering further
confirm the presence of reactive groups (C=C bonds) in the particles and its narrow sizes distribution. The resulting composite hydrogels (MA-GNP/PAAm) are porous materials with tunable pore sizes and exhibit enhanced compressive resistance and elasticity as well. Increasing appropriately the dosage of MA-GNP reduces the equilibrium swelling ratio and improves thermal stability of the gels. Moreover, all the hydrogels exhibit prolonged blood-clotting time, nonhemolytic nature and strong suitability for cell proliferation, indicating the improved antithrombogenicity and excellent cyto-compatibility. It suggests
that the novel MA-GNP/PAAm hydrogels have potential application as tissue engineer scaffold materials, and the MA-GNP can be a promising macromolecular microsphere cross-linker for application in biomedical materials. The present work not only exploits new strategies to fabricate MMC hydrogels but also advance the potential application of biodegradable gelatin-based nanoparticles in biomedical fields.
Take-Away:
1. A well-dispersed methacrylated gelatin nanoparticle (MA-GNP) with an average size of ~100 nm is presented by a modified two-step desolvation method.
2. MA-GNP is readily introduced into the polyacrylamide (PAAm) system as a cross-linker to prepare macromolecular microsphere composites (MMC) hydrogels via a free radical polymerization reaction.
3. MA-GNP is an effective cross-linker, improving both the compressive resistance and elasticity of MMC hydrogels as well as the biocompatibility.
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Kinesin model for Brownian dynamics simulations of stepping efficiencyMurrow, Matthew Alan 29 August 2019 (has links)
No description available.
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Echokardiographische Untersuchung der linksatrialen Größe und Funktion bei gesunden Katzen und bei Katzen mit linksventrikulärer HypertrophieMaerz, Imke 30 October 2007 (has links)
Die Vergrößerung des linken Vorhofes (LA) hat bei Katzen mit Herzerkrankungen eine prognostische Bedeutung und wird mit einem erhöhten Risiko der Entwicklung einer Links-herzinsuffizienz, von supraventrikulären Arrhythmien, von systemischer Thrombembolie und von plötzlichem Herztod in Verbindung gebracht. Bei Katzen mit idiopathischer (HCM) oder sekundärer linksventrikulärer (LV) Hypertrophie kommt es infolge einer LV diastolischen Dysfunktion zu Veränderungen von Größe und Funktion des LA. Ziel der prospektiven Studie war es, die Größe und Funktion des LA in einer Population gesunder Katzen und Katzen mit Kardiomyopathie elektrokardiographisch, radiologisch sowie echokardiographisch zu charakterisieren und die Tiergruppen sowie die diagnostischen Methoden miteinander zu vergleichen. Zur Untersuchung des LA wurden 59 Katzen berücksichtigt. Die Kontrollgruppe bestand aus 26 gesunden Katzen und die Gruppe der kranken Tiere aus 33 Katzen mit HCM oder einer sekundären LV-Hypertrophie. Davon waren 18 Katzen asymptomatisch und 15 hatten eine Linksherzinsuffizienz oder einen aortalen Thrombembolismus. Im EKG wurde die Dauer der P-Welle als diagnostisches Kriterium der LA-Größe untersucht. Bei der radiologischen Untersuchung wurde die Größe des LA in zwei orthogonalen Projektionsebenen subjektiv beurteilt. Außerdem wurde eine neue quantitative Messung des LA im latero-lateralen Strahlengang etabliert. Diese vergleicht die Größe des LA mit der Länge der Thorakalwirbel und wurde als vertebrale Vorhofgröße (LA-VHS) bezeichnet. Mit der transthorakalen zweidimensionalen (2D)- und M-Mode Echokardiographie konnte die Größe des LA durch unterschiedliche Messungen bestimmt werden. Im rechts-parasternalen Vierkammerblick wurden der maximale antero-posteriore Durchmesser des LA (LADs) gemessen und als echokardiographische Bezugsvariable („Gold Standard“) zur Charakterisierung der LA-Größe genutzt. Aus derselben Anschallung wurden die maximale apico-basale Länge des LA und die maximale Vorhoffläche ermittelt. In der rechts-parasternalen Darstellung des LV-Ausflusstraktes wurde unter Anwendung des M-Modes der LA dargestellt und das LA/Ao-Verhältnis berechnet. In der rechts-parasternalen kurzen Achse wurde der maximale Durchmesser des LA (LAmax) bestimmt und sowohl die so genannte „schwedische Methode“ als auch der M-Mode zur Bestimmung der Vorhofgröße und Berechnung der LA/Ao-Verhältnisse angewandt. Der LA wurde als vergrößert definiert, sobald LADs größer 1,60 cm war. Die Ergebnisse der weiteren echokardiographischen Messmethoden zur Charak-terisierung der LA-Größe wurden mit LADs verglichen und folgende Grenzwerte zur Diagnose einer Vergrößerung des LA für die einzelnen unterschiedlichen Messmethoden ermittelt: aus der rechts-parasternalen langen Achse die maximale LA-Länge 1,97 cm, die maximale LA-Fläche 2,80 cm2 und LA/Ao (M-Mode) 1,55, aus der rechts-parasternalen kurzen Achse LA/Ao (M-Mode) 1,54, LA/Ao („schwedische Methode“) 1,44 und LAmax 1,60 cm. Trotz ähnlicher Grenzwerte der LA/Ao-Verhältnisse konnte gezeigt werden, dass die Messwerte der unterschiedlichen Methoden untereinander abweichen und daher diagnostisch nicht austauschbar sind. Die Ergebnisse der elektrokardiographischen und radiologischen Messungen der LA-Größe wurden hinsichtlich ihrer diagnostischen Wertigkeit mit den echokardiographischen Unter-suchungen zur Diagnose einer LA-Vergrößerung verglichen. Das EKG (P-Welle) war wenig sensitiv aber spezifisch bei der Diagnosestellung einer LA-Vergrößerung. Die subjektive radiologische Beurteilung der LA-Größe hatte eine deutlich höhere diagnostische Treffsicherheit, wobei jedoch die Bestimmung der LA-VHS sowohl die größte Sensitivität als auch Spezifität zeigte. Zur Einschätzung der globalen Vorhoffunktion wurden die echokardiographischen Indices LA-Verkürzungsfraktion und LA-Flächenverkürzung herangezogen. Beide Variablen waren in der Gruppe der symptomatischen Katzen deutlich vermindert, verglichen mit der Kontrollgruppe und der Gruppe der asymptomatischen Katzen mit LV-Hypertrophie. Die Reservoirfunktion des LA wurde anhand der S-Welle und des S/D-Verhältnisses des Pulmonalvenenflusses beurteilt. In der Gruppe der symptomatischen Katzen mit LV-Hypertrophie lag das S/D-Verhältnis unter 1,0, was für eine gestörte Reservoirfunktion des LA sprach. Die Weiterleitungsfunktion des LA, charakterisiert durch die D-Welle des Pulmonalvenenflusses war in der Gruppe der symptomatischen Katzen im Gegensatz zu den beiden anderen Gruppen signifikant vermindert. Die Vorhofkontraktion („Booster-Funktion“) wurde anhand der transmitralen A-Welle und der AR-Welle des Pulmonalvenenflusses beurteilt. Hinsichtlich der AR-Welle lag kein Unterschied der Maximalgeschwindigkeit zwischen den drei Tiergruppen vor, jedoch war die Dauer der AR-Welle in der Gruppe der symptomatischen Katzen verlängert. Dieses wurde als Hinweis auf eine erhöhte Nachlast des LA (verminderte LV Dehnbarkeit) und/oder gestörte systolische Funktion des LA gewertet. Die Untersuchung der Blutflussgeschwindigkeit im linken Herzohr zeigte eine deutliche Abnahme in der Gruppe der symptomatischen Katzen und galt als hinweisend für eine gestörte Pumpfunktion und Blutstase. Es wurde ein Zusammenhang zwischen verminderter Blutflussgeschwindigkeit im linken Herzohr (< 0,23 m/s) und dem Risiko eines aortalen Thrombembolismus gefunden. Zusammenfassend kann festgestellt werden, dass eine LV-Hypertrophie bei Katzen zu einer Vergrößerung des LA, verminderter Funktion des LA und Blutstase in LA und im linken Herzohr führt. Somit bestätigt sich die Vermutung, dass der LA sowohl einen diagnostischen als auch prognostischen Wert bei der Untersuchung von Katzen mit HCM oder sekundärer LV-Hypertrophie hat. Die vorliegende Studie liefert einen Beitrag zur echokardiographischen Standarisierung der LA-Größe und LA-Funktion bei der Katze. Weitere Untersuchungen, insbesondere die invasive Validierung echokardiographischer Indices der Größe und Funktion des LA sind notwendig.
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SYNTHESIS AND CHARACTERIZATION OFSELF-ASSEMBLY BUILDING BLOCK CONTAINING PORPHYRIN RING AND BULKY BPOSS NANOPARTICLESHuang, Xin January 2017 (has links)
No description available.
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Biophysical Enhancement of Protein Therapeutics and Diagnostics Through Engineered LinkersLong, Nicholas E. 27 July 2018 (has links)
No description available.
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Exploring Composition of Peptide Loops to Enhance Biophysical Properties of Antibody Fragments for Cancer TherapeuticsHan, Jeong Min January 2020 (has links)
No description available.
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Depressive symptoms and cardiometabolic health in urban black Africans : the SABPA study / Nyiko MasheleMashele, Nyiko January 2014 (has links)
Motivation -
Depression is a mental disorder that has been associated with cardiovascular morbidity and
mortality in the Western world. Cardiometablic mechanisms have been implicated as possible
intermediating factors in the relationship between depressive symptoms and cardiovascular
disease; however this has not yet been determined in black Africans (hereafter referred to as
Africans).
Aim -
The overarching aim of this study was to investigate the relationship between depressive
symptoms and cardiometabolic risk. We therefore aimed to assess cardiometabolic function,
neuroendocrine responses, inflammatory and haemostatic markers in Africans with
depressive symptoms compared to those without symptoms of depression.
Methodology -
Manuscripts presented in Chapter 2, 3 and 4 utilised data from the cross-sectional, target
population multi-disciplinary “Sympathetic activity and Ambulatory Blood Pressure in
Africans” (SABPA) study. The participants comprised of 200 African teachers from the Dr
Kenneth Kaunda District in North-West province, South Africa. As cardiovascular disease is
compromised by a positive HIV status, 19 participants were excluded from further statistical
analysis. Stratification was based on the Patient Health Questionnaire 9-item (PHQ-9), which
has been validated in a sub-Saharan African setting. PHQ-9 scores > 10 were used to classify
participants as having signs of depressive symptoms. Subjects were further stratified by
gender (Manuscript 1 and 3) and cortisol responses (Manuscript 2). Cardiometabolic health
measures included 24-hour blood pressure, metabolic syndrome markers, neuroendocrine
markers [cortisol and 3-methoxy-4-hydroxy-phenylglycol (MHPG)], left ventricular hypertrophy (LVH),inflammatory and haemostatic markers (fibrinogen, C-reactive protein,
plasminogen activator inhibitor-1 and D-dimer). Resting 12-lead ECG Cornell Product-Left
ventricular hypertrophy (CP-LVH) was measured as a marker of target end-organ damage
and cardiovascular dysfunction (Manuscript 1 and 2).
Means and prevalence were computed through t-test and Chi-square analysis respectively.
Significant differences of mean cardiometabolic measures between depressive symptom
status groups were also determined by analysis of covariance (adjusted for traditional
cardiovascular risk factors and additional factors as specific per manuscript). Multivariate
analysis was used to demonstrate associations between left ventricular hypertrophy (LVH)
and cardiometabolic markers in Africans with depressive symptoms (Manuscript 1 and 2) and
a logistic regression analysis were performed to examine the association between depressive
symptoms and inflammatory/haemostatic factors (Manuscript 3).
All subjects who participated gave informed consent, the study was approved by the Ethics
Committee of North-West University (NWU-0003607S6), in accordance with the principles
outlined by the World Medical Association Declaration of Helsinki of 1975 (revised 2008).
Results and conclusions of the individual manuscripts -
The aim of the study was to investigate the associations between depressive symptoms and
cardiometabolic function including cardiovascular dysfunction. Markers of cardiometabolic
function assessed were 24 hour blood pressure measurements, metabolic syndrome markers,
neuroendocrine markers [cortisol and 3-methoxy-4-hydroxy-phenylglycol (MHPG)],
inflammatory and haemostatic variables (fibrinogen, C-reactive protein, plasminogen
activator inhibitor-1 and D-dimer).
Manuscript 1, focused on LVH as a marker of cardiovascular dysfunction and metabolic
syndrome components as markers of cardiometabolic function. The aim of the study was to assess the associations between LVH and metabolic syndrome (MetS) risk markers in
participants with and without depressive symptoms. Results revealed that in African men
with depressive symptoms the most significant determinants of LVH were systolic blood
pressure (SBP) and the percentage glycosylated haemoglobin (HbA1c). While in African
women (with depressive symptoms), this association was determined by low high-density
lipoprotein (HDL-cholesterol). The study concluded that in black African men, independent
of depressive symptoms, cardiometabolic factors (namely SBP and HbA1c) may be the
driving significant factors in the development of cardiovascular diseases. Furthermore, the
data showed that depressive symptoms in African women were associated with a measure of
target end organ damage, and that this association was driven by a metabolic factor.
Manuscript 2, the aim of this manuscript was to examine the relationship between depressive
symptoms, neuroendocrine responses [with cortisol and 3-methoxy-phenylglycol (MHPG) as
markers] and cardiovascular risk, i.e. LVH. The results revealed that Africans with depressive
symptoms demonstrated blunted cortisol and MHPG levels in response to acute mental stress,
in comparison to those without symptoms of depression. Additionally, these low cortisol and
blunted MHPG responses were associated with LVH in this ethnic group. The conclusion for
this manuscript was that, blunted neuroendocrine responses linked depressive symptoms and
ECG left ventricular hypertrophy in Africans. When coupled to their hypertensive status,
these vasoconstrictive responses (cortisol and MHPG) may underpin the increased long-term
depression and vascular disease risk in urban Africans.
Manuscript 3, the aim of this manuscript was to investigate the relationship between
depressive symptoms and inflammatory/haemostatic markers in a cohort of urban-dwelling
black African men and women. Our data demonstrated hypercoagulation vulnerability in
African men with depressive symptoms. The African men with signs of depression displayed
higher plasminogen activator inhibitor (PAI-1) levels and marginally elevated D-dimer levels. It was concluded that hypercoagulation may partially be the mediating factor between
depressive symptoms and cardiovascular risk in African men; a situation that may be
exacerbated by hyperkinetic blood pressure.
In conclusion, through the assessement of cardiometabolic function and neuroendocrine
responses, it seems that Africans withdepressive symptoms are at great risk for
cardiovascular related morbidity and mortality, this was particulary evident in the African
men (Manuscript 1 and 3). Additionally, it appears that blunted neuroendocrine responses and
hypercoagulation could be seen as possible cardiovascular risk markers in Africans with
depressive symptoms. / PhD (Physiology), North-West University, Potchefstroom Campus, 2014
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Depressive symptoms and cardiometabolic health in urban black Africans : the SABPA study / Nyiko MasheleMashele, Nyiko January 2014 (has links)
Motivation -
Depression is a mental disorder that has been associated with cardiovascular morbidity and
mortality in the Western world. Cardiometablic mechanisms have been implicated as possible
intermediating factors in the relationship between depressive symptoms and cardiovascular
disease; however this has not yet been determined in black Africans (hereafter referred to as
Africans).
Aim -
The overarching aim of this study was to investigate the relationship between depressive
symptoms and cardiometabolic risk. We therefore aimed to assess cardiometabolic function,
neuroendocrine responses, inflammatory and haemostatic markers in Africans with
depressive symptoms compared to those without symptoms of depression.
Methodology -
Manuscripts presented in Chapter 2, 3 and 4 utilised data from the cross-sectional, target
population multi-disciplinary “Sympathetic activity and Ambulatory Blood Pressure in
Africans” (SABPA) study. The participants comprised of 200 African teachers from the Dr
Kenneth Kaunda District in North-West province, South Africa. As cardiovascular disease is
compromised by a positive HIV status, 19 participants were excluded from further statistical
analysis. Stratification was based on the Patient Health Questionnaire 9-item (PHQ-9), which
has been validated in a sub-Saharan African setting. PHQ-9 scores > 10 were used to classify
participants as having signs of depressive symptoms. Subjects were further stratified by
gender (Manuscript 1 and 3) and cortisol responses (Manuscript 2). Cardiometabolic health
measures included 24-hour blood pressure, metabolic syndrome markers, neuroendocrine
markers [cortisol and 3-methoxy-4-hydroxy-phenylglycol (MHPG)], left ventricular hypertrophy (LVH),inflammatory and haemostatic markers (fibrinogen, C-reactive protein,
plasminogen activator inhibitor-1 and D-dimer). Resting 12-lead ECG Cornell Product-Left
ventricular hypertrophy (CP-LVH) was measured as a marker of target end-organ damage
and cardiovascular dysfunction (Manuscript 1 and 2).
Means and prevalence were computed through t-test and Chi-square analysis respectively.
Significant differences of mean cardiometabolic measures between depressive symptom
status groups were also determined by analysis of covariance (adjusted for traditional
cardiovascular risk factors and additional factors as specific per manuscript). Multivariate
analysis was used to demonstrate associations between left ventricular hypertrophy (LVH)
and cardiometabolic markers in Africans with depressive symptoms (Manuscript 1 and 2) and
a logistic regression analysis were performed to examine the association between depressive
symptoms and inflammatory/haemostatic factors (Manuscript 3).
All subjects who participated gave informed consent, the study was approved by the Ethics
Committee of North-West University (NWU-0003607S6), in accordance with the principles
outlined by the World Medical Association Declaration of Helsinki of 1975 (revised 2008).
Results and conclusions of the individual manuscripts -
The aim of the study was to investigate the associations between depressive symptoms and
cardiometabolic function including cardiovascular dysfunction. Markers of cardiometabolic
function assessed were 24 hour blood pressure measurements, metabolic syndrome markers,
neuroendocrine markers [cortisol and 3-methoxy-4-hydroxy-phenylglycol (MHPG)],
inflammatory and haemostatic variables (fibrinogen, C-reactive protein, plasminogen
activator inhibitor-1 and D-dimer).
Manuscript 1, focused on LVH as a marker of cardiovascular dysfunction and metabolic
syndrome components as markers of cardiometabolic function. The aim of the study was to assess the associations between LVH and metabolic syndrome (MetS) risk markers in
participants with and without depressive symptoms. Results revealed that in African men
with depressive symptoms the most significant determinants of LVH were systolic blood
pressure (SBP) and the percentage glycosylated haemoglobin (HbA1c). While in African
women (with depressive symptoms), this association was determined by low high-density
lipoprotein (HDL-cholesterol). The study concluded that in black African men, independent
of depressive symptoms, cardiometabolic factors (namely SBP and HbA1c) may be the
driving significant factors in the development of cardiovascular diseases. Furthermore, the
data showed that depressive symptoms in African women were associated with a measure of
target end organ damage, and that this association was driven by a metabolic factor.
Manuscript 2, the aim of this manuscript was to examine the relationship between depressive
symptoms, neuroendocrine responses [with cortisol and 3-methoxy-phenylglycol (MHPG) as
markers] and cardiovascular risk, i.e. LVH. The results revealed that Africans with depressive
symptoms demonstrated blunted cortisol and MHPG levels in response to acute mental stress,
in comparison to those without symptoms of depression. Additionally, these low cortisol and
blunted MHPG responses were associated with LVH in this ethnic group. The conclusion for
this manuscript was that, blunted neuroendocrine responses linked depressive symptoms and
ECG left ventricular hypertrophy in Africans. When coupled to their hypertensive status,
these vasoconstrictive responses (cortisol and MHPG) may underpin the increased long-term
depression and vascular disease risk in urban Africans.
Manuscript 3, the aim of this manuscript was to investigate the relationship between
depressive symptoms and inflammatory/haemostatic markers in a cohort of urban-dwelling
black African men and women. Our data demonstrated hypercoagulation vulnerability in
African men with depressive symptoms. The African men with signs of depression displayed
higher plasminogen activator inhibitor (PAI-1) levels and marginally elevated D-dimer levels. It was concluded that hypercoagulation may partially be the mediating factor between
depressive symptoms and cardiovascular risk in African men; a situation that may be
exacerbated by hyperkinetic blood pressure.
In conclusion, through the assessement of cardiometabolic function and neuroendocrine
responses, it seems that Africans withdepressive symptoms are at great risk for
cardiovascular related morbidity and mortality, this was particulary evident in the African
men (Manuscript 1 and 3). Additionally, it appears that blunted neuroendocrine responses and
hypercoagulation could be seen as possible cardiovascular risk markers in Africans with
depressive symptoms. / PhD (Physiology), North-West University, Potchefstroom Campus, 2014
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Produção de uma molécula recombinante híbrida de duas proteínas de Streptococcus pneumoniae: PspA94-PdT. / Production of a recombinant hybrid molecule composed of two proteins of Streptococcus pneumoniae: PspA94-PdTKraschowetz, Stefanie 29 March 2018 (has links)
Streptococcus pneumoniae é causa de doenças como pneumonia, otite, meningite e sepse. As vacinas hoje disponíveis têm cobertura limitada porque são baseadas no polissacarídeo capsular, que varia com os mais de 90 sorotipos da bactéria, além de levarem à substituição de sorotipos na população por outros não presentes nas formulações. Visando reduzir o custo e aumentar a cobertura, têm-se estudado vacinas baseadas em proteínas que ofereceriam proteção independente de sorotipo. Este trabalho teve por objetivo a obtenção, avaliação da estabilidade e da resposta imune em camundongos de híbridos de duas proteínas de S. pneumoniae: a proteína de superfície do pneumococo (PspA) e a pneumolisina geneticamente detoxificada (PdT), sem ou com espaçadores moleculares, rígido ou flexível, entre as moléculas. Os genes dos híbridos com espaçadores foram clonados através da técnica de overlap extension PCR. O gene das proteínas foi expresso em E. coli e as proteínas obtidas foram reconhecidas por anticorpos produzidos contra a célula inteira de pneumococo através de Western Blot. A purificação dos híbridos foi feita utilizando homogeneizador de alta pressão, precipitação de impurezas com detergente catiônico CTAB e diferentes etapas cromatográficas. A estabilidade foi analisada periodicamente através de SDS-PAGE e Western Blot. O híbrido sem espaçador mostrou-se instável, por isso a presença de atividade proteolítica foi investigada através de diversos ensaios para detecção dessas enzimas, mostrando que a instabilidade não decorreu de hidrólise por proteases. Os fragmentos resultantes da quebra tiveram a porção N-terminal sequenciada para identificar o sítio de clivagem, que estava localizado na junção das duas proteínas. Esse sítio foi retirado das construções seguintes e espaçadores moleculares foram incluídos entre os dois antígenos. A molécula com espaçador flexível foi obtida na forma solúvel durante o cultivo, porém durante a purificação ocorreu precipitação irreversível. O clone para produção do híbrido com espaçador rígido permitiu a obtenção da proteína, que foi purificada e teve a estabilidade avaliada periodicamente à 4° C e -20° C por Western Blot empregando anticorpos contra célula inteira de pneumococo, indicando que a introdução do espaçador rígido aumentou a estabilidade do híbrido em relação à molécula sem espaçador. Além disso, diferentes concentrações de estabilizantes foram avaliadas, mostrando que em presença de trealose 1M ou glicerol 50% o híbrido com linker rígido permaneceu estável por pelo menos 4 meses a 4° C. A molécula com espaçador rígido produziu níveis de anticorpos em camundongos comparáveis aos níveis obtidos com a molécula sem espaçador, que foram capazes de proteger 100% dos animais em ensaio de desafio letal intranasal e inibir a atividade hemolítica da pneumolisina. O aumento de estabilidade do híbrido alcançado com a inserção do linker rígido juntamente com a retirada do sítio de clivagem e com a presença de estabilizantes permitem que esta molécula seja utilizada numa vacina pneumocócica proteica. Como estudos vêm demonstrando que seria necessário mais de uma proteína para formular esta nova vacina, a produção deste híbrido traz a grande vantagem de obtenção de dois antígenos em um único processo de produção, o que pode resultar em uma diminuição do custo da dose. / Streptococcus pneumoniae is cause of diseases like pneumonia, otitis, menngitis and sepsis. The vaccines available nowadays has limited coverage because they are based on the capsular polysaccharyde, which varies among the more than 90 bacteria serotypes and they lead to serotype substitution on the population for others not present on the vaccine formulations. In order to reduce the cost and increase the coverage, vaccines based on pneumococcal proteins that would offer serotype independent protection have been studied. The objective of this thesis was the obtainment, stability evaluation and immune response evaluation in mice of hybrids composed of two proteins of S. pneumoniae: pneumococcal surface protein A (PspA) and genetically detoxified pneumolysin (PdT), with or without molecular linkers, rigid and flexible, between the molecules. The genes with molecular linkers were cloned using the overlap extension PCR technique. The genes were expressed in E. coli and the proteins were recognized by anti pneumococcal whole cell in Western Blot. The hybrids were purified using high pressure homogeneizer, precipitation of impurities using cationic detergent CTAB and different chromatography steps. The stability was periodically analyzed through SDS-PAGE and Western Blot. The hybrid without linker was unstable and the presence of proteolytic activity was investigated through several methods for protease activity detection, showing that instability was not due to protease hydrolysis. The N-terminal portion of the degraded protein fragments was sequenced in order to identify the cleavage site, which was localized exactly between the two proteins. This site was removed from the other hybrids and molecular linkers were included between the two antigens. The molecule with flexible linker was obtained on the soluble form during expression, but during purification it precipitated irreversibly. The molecule with rigid linker were expressed, purified and had its stability analyzed periodically at 4° C and -20° C by Western Blot using anti pneumococcal whole cell, indicating that the insertion of the rigid linker increased the hybrid stability when compared with the hybrid without linker. Besides that, different stabilizers in different concentrations were evaluated and it was found that the presence of trehalose 1 M or 50% glycerol stabilized the hybrid with rigid linker for at least 4 months at 4 ° C. The molecule with rigid linker produced levels of antibodies in mice comparable to the hybrid without linker. These antibodies were able to protect 100% of animals from lethal intranasal challenge and inhibit the haemolytic activity of pneumolysin. The stability increase due to the rigid linker together with the removal of the cleavage site and the stabilizers presence allow this hybrid molecule to be used on a novel pneumococcal vaccine. Since studies have shown that it would be necessary more than one protein to formulate this new vaccine, the production of this hybrid brings the great advantage of producing two antigens in one single process, which can decrease the dosage cost.
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