Introdução: O carcinoma de células renais (CCR) representa uma causa crescente de mortalidade por câncer. Apesar da sua curabilidade em estádios iniciais, agentes citotóxicos e imunomodulatórios têm homogeneamente alcançado nenhum ou pouco benefício no tratamento do CCR avançado. Um melhor entendimento da biologia tumoral pode levar ao desenvolvimento de terapias mais eficientes e dirigidas aos mecanismos moleculares de manutenção do tumor. Sinalização aumentada através do receptor do fator de crescimento epitelial (EGFR), sistema de quinases proteicas ativadas por mitógenos (MAPK) e via da fosfatidilinositol 3-quinase (PI3K) assim como estimulação do complexo de início de tradução (CIT) foram caracterizados em linhagens celulares e amostras tumorais de CCR. Nós investigamos o efeito de um inibidor de EGFR (gefitinibe), de um inibidor de MAPK (UO126) e de um inibidor do CIT (rapamicina) nos intermediários de sinalização celular e nos elementos do CIT assim como no crescimento in vitro de linhagens celulares de CCR. Métodos: Linhagens celulares de CCR (PRC3, WT8, SKRC-02, SKRC-17, SKRC-39, SKRC-45, ACHN e KRCY) foram mantidas em condições ideais para a cultura de células de mamíferos e expostas a drogas e/ou inibidores nas concentrações e por períodos de tempo variáveis. A fosforilação de intermediários da sinalização celular foi determinada utilizando-se western blots. Nível de mRNA para genes de interesse foram determinados por qRT-PCR. Crescimento celular foi avaliado por método colorimétrico em diferentes concentrações de gefitinibe, UO126 e rapamicina, isoladamente ou em combinação. Resultados: UO126 levou a defosforilação não apenas de intermediários de MAPK como também de substratos do alvo da rapamicina em mamíferos (mTOR) revelando sinalização cruzada entre essas vias. Nós identificamos ainda que ERK5 é a quinase potencialmente responsável por esta sinalização cruzada. No entanto, tratamento com UO126 não afetou o nível de mRNA para o substrato de mTOR 4EBP1. Gefitinibe foi capaz de bloquear a sinalização iniciada por EGF na via de PI3K em todas as linhagens wt-PTEN e de bloquear a sinalização através de ERK1/2 e ERK5 ao menos parcialmente em todas as linhagens celulares. Rapamicina mostrou-se um potente inibidor do crescimento na maioria das linhagens celulares de CCR e tal efeito foi freqüentemente amplificado com a combinação com UO126 ou gefitinibe.Conclusão: EGFR, MAPK e CIT são alvos promissores no tratamento do CCR / Background: Renal cell carcinoma (RCC) is an increasing cause of cancer mortality. Despite its curability in early stages, conventional cytotoxic and immunomodulatory agents have been homogeneous in providing minimal or no benefit in the treatment of advanced RCC. Better understanding of tumor cell biology may lead to development of more efficient targeted therapies. Signaling intensification through epithelial growth factor receptor (EGFR), mitogenactivated protein kinase (MAPK) pathway, Phosphatidylinositol 3-kinase (PI3K) pathway and overactivation of the translation initiation complex (TIC) has been previously characterized in RCC cell lines and tumor samples. We investigated the effect of an EGFR inhibitor (gefitinib) as well as a MAPK inhibitor (UO126) and a TIC inhibitor (rapamycin) in the intermediates of cell signaling, in the elements of TIC and in the in vitro growth of RCC cell lines. Methods: RCC cell lines (PRC3, WT8, SKRC-02, SKRC-17, SKRC-39, SKRC-45, ACHN and KRCY) were maintained on standard mammalian cells culture conditions and exposed to drugs and/or inhibitors in variable concentrations and for variable periods of time as required in each experiment. Phosphorylation status of signaling intermediates were determined using western blots. Levels of mRNA for genes of interest were determined by qRT-PCR. Cell growth was assessed by colorimetric method in control conditions or in different concentrations of gefitinib, UO126 or rapamycin, alone or in combination. Results: UO126 caused dephosphorylation not only of MAPK intermediates but also of mammalian target of rapamycin (mTOR) substrates revealing crosstalk between these pathways. We also identified ERK5 as a kinase potentially responsible for such cross talk. However, treatment with UO126 did not affect mRNA levels of the downstream target of mTOR 4EBP1. Gefitinib was able to block EGF signaling through PI3K in all wt- PTEN cell lines and the signaling through ERK1/2 and ERK5 at least partially in all cell lines. Rapamycin was found to be a potent growth inhibitor in most RCC cell lines and such effect was often increased by its combination with UO126 or gefitinib. Conclusion: EGFR, MAPK and CIT are promising targets for the treatment of RCC

Einen Aspekt dieser Arbeit stellt die Analyse der Stimulation von Ratten-Calvaria-Osteoblasten (RCA) mit den beiden Wachstumsfaktoren TGF-b1 und BMP-4 während der Proliferations- sowie Differenzierungs- und Mineralisierungsphase dar. Hierfür soll die Phosphorylierung und Aktivierung von Erk1 und Erk2, sowie von Smad1 und Smad2 mit Hilfe eines Kinase-Aktivitätsassays sowie der Westernblot-Analyse untersucht werden. Im Rahmen dieser Arbeit soll weiterhin untersucht werden, welche Bedeutung die Wachstumsfaktoren TGF-b1 und BMP-4 auf die Aktivität der alkalischen Phosphatase (ALP), einem wichtigen Differenzierungsmarker in Osteoblasten, ausüben. Enzymatische Aktivitätsbestimmungen und zytochemische Färbung aktiver ALP sollen darüber Aufschluss geben. Weiterhin soll der Gehalt an ALP-mRNA durch PCR bestimmt werden. Ein weiteres wichtiges Ziel dieser Arbeit ist die Analyse der Bedeutung von Erk1, Erk2, Smad1 und Smad2 auf die Aktivität der ALP. Dafür sollen Inhibitoren eingesetzt werden. Die enzymatische Aktivitätsbestimmung soll darüber aufklären. Außerdem soll mit Hilfe von kurzen, doppelsträngigen RNA-Molekülen (siRNA) ein knock down der Kinasen herbeigeführt werden und dessen Auswirkung auf die Aktivität der ALP enzymatisch bestimmt werden. Dafür muss zunächst die Wirksamkeit der siRNA auf RNA-Ebene mittels PCR und auf Proteinebene mittels Westernblot-Analysen überprüft werden. Zusätzlich soll die Bedeutung der Wachstumsfaktoren und der Kinasen Erk1 und Erk2 auf die Mineralisierung der RCA analysiert werden. Dafür wird die Menge des zellassoziierten Kalziums und Phosphats experimentell bestimmt, wodurch der Mineralisationsgrad der Zellen wiedergegeben werden kann.

It is widely known that early estimates about the binding properties of drug candidates are important in the drug discovery process. Surface plasmon resonance (SPR) biosensors have become a standard tool for characterizing interactions between a great variety of biomolecules and it offers a unique opportunity to study binding activity. The aim of this project was to develop a SPR based assay for pre-screening of low molecular weight (LMW) drug compounds, to enable filtering away disturbing compounds when interacting with drugs. The interaction between 47 LMW compounds and biological ligands were investigated using the instrument BiacoreTM, which is based on SPR-technology.

Diss. (sammanfattning) Umeå : Umeå universitet, 2008. / Härtill 5 uppsatser.

Thesis (Ph.D.) -- University of Texas Southwestern Medical Center at Dallas, 2006. / Not embargoed. Vita. Bibliography: 97-109.

The c-Jun NH2-terminal kinase (JNK) group and the p38 group of mitogen-activated protein kinases (MAPK) are stress-activated protein kinases that regulate cell proliferation, differentiation, development, and apoptosis. These protein kinases are involved in a signal transduction cascade that includes a MAP kinase (MAPK), a MAP kinase kinase (MAP2K), and a MAP kinase kinase kinase (MAP3K). MAPK are phosphorylated and activated by the MAP2K, which are phosphorylated and activated by various MAP3K. The work presented in this dissertation focuses on understanding the regulation and function of the JNK and p38 MAPK pathways. Two different strategies were utilized. First, I used molecular and biochemical techniques to examine how MAP2K and MAP3K mediate signaling specificity and to define their role in the MAPK pathway. Second, I used gene targeted disruption studies to determine the in vivo role ofMAP2K and MAP3K in MAPK activation. I specifically used these approaches to examine: (1) docking interactions between p38 MAPK and MAP2K [MKK3 and MKK6 (Chapter II)]; (2) the differential activation of p38 MAPK by MAP2K [MKK3, MKK4, and MKK6 (Chapter III)]; and (3) the selective involvement of the mixed lineage kinase (MLK) group of MAP3K in JNK and p38 MAPK activation (Chapter IV and Appendix). In addition, I analyzed the role of the MKK3 and MKK6 MAP2K in cell proliferation and the role of the MLK MAP3K in adipocyte differentiation (Chapter III and Chapter IV). Together, these data provide insight into the regulation and function of the stress-activated MAPK signal transduction pathways.

Partículas da exaustão de motores a diesel (DEP) têm propriedades toxicológicas, devido às características físico-químicas. O DEP é capaz de ativar as vias de sinalização intracelular e induzir alterações metabólicas em células e tecidos do sistema respiratório. O objetivo desta tese foi: 1) avaliar o perfil das mucinas e alterações epiteliais em explantes de traqueia de camundongo BALB/c expostos ao DEP e DEP tratado com ácido nítrico e solventes orgânicos; e 2) em cultura de células de epitélio brônquico humano (BEAS-2B) expostas ao DEP e DEP tratado com hexano (DEP/HEX) para avaliar ativação de MAPK (ERK e JNK), citotoxidade, integridade de citoesqueleto, viscoelasticidade celular e expressão gênica de enzimas envolvidas no estresse oxidativo e apoptose. Os resultados mostraram que, em explantes de traqueia, o DEP causa aumento significativo em relação ao grupo controle na quantidade de muco ácido (p= 0,001), diminuição no muco neutro (p=0,001), diminuição de muco misto (p= 0,001), aumento de vacuolização (p= 0,001), aumento de apoptose (p=0,001), ora com aumento de pERK e diminuição de pJNK, e vice-versa. Os explantes submetidos à exposição ao DEP e DEP/MET aumentaram significativamente o muco ácido (p=0,01) e DEP/HEX provocou aumento da extrusão do muco (p=0,007), provavelmente devido à ação do enriquecimento inorgânico. Para as células BEAS-2B, nos resultados obtidos com células epiteliais expostas ao DEP e DEP/HEX, foram observadas alterações na membrana citoplasmática, mitocôndrias e citoesqueleto. As células expostas apenas ao DEP em baixas concentrações (15ug/mL) apresentaram alterações na expressão de genes envolvidos no apoptose (BCL-2 e Caspase-3 (p=0,05 e p=0,01) e estresse oxidativo [(SOD1 e SOD2 e GPx. p=0,01 )], e CYP1A1 ((p=0,01) / Diesel exhaust particles (DEPs) from diesel engines have toxic properties that result from their physical and chemical characteristics. DEPs are able to activate intracellular signaling pathways and induce metabolic changes to cells and tissues of the human respiratory system. This dissertation sought to evaluate: 1) the profile of mucins and the epithelial changes to the tracheal explants of BALB/c mice exposed to both DEP and DEP treated with nitric acid and organic solvents (50 and 100 ug/mL; and 2) human bronchial epithelial cells (BEAS-2B) in culture after their exposure to both DEP and DEP treated with hexane (DEP/HEX) at 100 ug/mL in order to determine MAPK (ERK/JNK) activation, cytotoxicity, cytoskeletal integrity, cell viscoelasticity and gene expression of the enzymes involved in oxidative stress and apoptosis. The results show that, in tracheal explants, DEP causes a significant increase (compared to the control) in the quantity of acidic mucus (p=0.001), a decrease in alkaline mucus (p=0.001), a decrease in mixed mucus (p=0.001), an increase in vacuolization (p=0.001), an increase in apoptosis (p=0.001), along with an increase in pERK and a decrease in pJNK, and vice versa. The explants that were exposed to DEP and DEP/MET were found to have significantly higher quantities of acidic mucus (p=0.01), and DEP/HEX caused an increase in mucus extrusion (p=0.007), which was likely due to inorganic enrichment. In the case of BEAS-2B cells, the results obtained from epithelial cells exposted to DEP and DEP/HEX revealed alterations in the cytoplasmic membrane, the mitochondria, and the cytoskeleton. The cells exposed to DEP alone at low concentrations (15 ug/mL) experienced alterations in the genes involved in apoptosis (BCL-2 and Caspase-3; p=0.05 and p=0.01, respectively), as well as oxidative stress [(SOD1, SOD2, and GPx; p=0.01 )], and changes to CYP1A1 (p=0.01)

Introduction AP2α is a 52 kDa retinoic acid inducible and developmentally regulated activator of transcription, which binds to the DNA in a sequence-specific manner. Transcription factor AP-2α was isolated from HeLa cells by affinity chromatography using specific binding sites with in SV40 and human metallothionein promoters. Further screening of HeLa cDNA library with oligonucleotide probes predicted partial peptide sequence which led to the isolation of AP-2α cDNA and subsequently it was mapped to chromosome 6 near HLA locus. A differentially spliced version of AP-2α, which lacks most of the C-terminus, encodes a dominant negative protein (AP-2B). Subsequent studies led to the identification of four more isoforms: AP-2β, AP-2γ, AP-2δ and AP-2ε. AP-2 family members can form homo or hetero dimers among themselves through the unique C-terminal helix span helix motif and bind DNA through basic domain lies N-terminus of DNA binding domain. Several evidences suggest that AP-2α can act as a tumor suppressor gene. It has been shown that AP-2α can activate growth suppressor genes like p21WAF1/CIP1. Transforming viral oncogenes like adenovirus E1A and SV40 large T antigen have been shown to alter AP-2α function. In addition, reduced expression of AP-2α has been reported in human breast, ovary, colon, skin, brain and prostate cancers. Further, supporting evidences suggest that more invasiveness and tumorogenicity was observed when dominant negative mutant of AP-2α was expressed in melanoma cells. In this work, we have carried out a systematic study to find the various signal transduction pathways which regulate AP-2 activity as well as we attempted to demonstrate the importance of DNA binding domain in the growth inhibitory functions of AP-2α. HDAC inhibitors (HDIs) activate AP-2 activity through spleen tyrosine kinase (Syk) In the literature, ample evidences are available that genotoxic drugs such as adriamycin, induce tumor suppressors like p53 and p73. In this study, we have screened pharmacological drugs which damage DNA and specific inhibitors of various signal transduction pathways for their ability to activate AP-2 activity. AP-2 specific reporter, 3Χ-AP2-CAT was used in this study to measure the AP-2 activity. Of all the compounds studied, we found that Histone Deacetylase Inhibitors (HDIs) efficiently activated AP-2 activity and was found to be specific as they failed to activate 3X-AP2 mut CAT, which contains mutated AP-2 binding sites as well as pGL tk Luc, which contains thymidine kinase minimal promoter and no AP-2 binding sites. To understand the mechanism of HDI-mediated of AP-2 activation, AP-2 isoforms and its coactivators transcript and protein levels were analyzed. We found significant change in transcript levels of the some of the molecules tested. While the endogenous protein levels of various AP-2 isoforms were undetectable, we found stabilization of AP-2α protein expressed from exogenous source in cells treated with HDIs. HDI stabilized AP-2α was found to be functionally active as it showed increased sequence-specific DNA-binding as well as increased apoptosis. While HDIs known for their ability to modulate the gene activities by chromatin remodeling, it is also known that they alter various signal transduction pathways. In an effort to find pathway(s) by which HDIs activate AP-2 activity, we found that HDIs failed to activate AP-2 reporter in the presence of staurosporine suggesting the involvement a staurosporine sensitive pathway(s) in this process. Stauosporine is a non-specific kinase inhibitor of different signaling pathways. Further studies using different pathway specific inhibitors identified that spleen tyrosine kinase (Syk) is essential for HDIs mediated activation of AP-2 activity. Syk is a non receptor tyrosine kinase which is known to be activated in stress conditions. Syk is considered to be a tumor suppressor since Syk over expression leads to growth suppression of breast cancer cells and is also inactivated in a subset of breast cancers. These results suggest that HDI mediated activation of AP-2 involves AP-2α stabilization through Syk pathway. Regulation of AP-2 by MAP kinase pathway Cell growth, differentiation, and apoptosis are mediated by the activation of mitogenactivated protein kinase (MAPK) pathways. These kinases constitute MAP kinase cascades mainly regulated through phosphorylation status. In mammalian cells, at least four MAPKs, namely, extracellular signal-regulated kinases (ERKs), c-Jun N-terminal kinase/stress-activated protein kinases (JNK/SAPKs), p38 and ERK5/big MAP kinase have been identified. The ERKs are usually activated by mitogenic stimuli which in turn increase the proliferation and survival. Over expression of any activator of this signaling cascade lead to the unregulated proliferation of cells. In many cancers, ERK pathways are known to be up regulated. In this study, we found that MEK (MEK is the immediate upstream regulator of ERK) inhibitors - PD98059 and U0126 activate 3X-AP2-CAT suggesting that AP-2 activity is repressed by activated MAP kinase pathway. MEK inhibitor mediated activation was found to be specific because they failed to activate transcription from pGL tk Luc which contains thymidine kinase minimal promoter and no AP-2 binding sites. To understand the mechanism of MEK inhibitor-mediated of AP-2 activation, AP-2 isoforms and its coactivators transcript and protein levels were analyzed. We found significant change in transcript levels of the some of the molecules tested. The endogenous protein levels of various AP-2 isoforms were undetectable. When AP-2α was exogenously expressed, while no change in protein levels and DNA-binding ability was seen, we found evidence for appearance of post-ranslationally modified AP-2α protein in U0126 treated cells. We also found CITED2 (CBP/p300-interacting transactivator 2, co-activator of AP-2α) transcript levels were up regulated in UO126 treated cells. Post translational modifications of AP-2α and increased and increased CITED2 levels may be responsible for MEK inhibitor mediated AP-2 activation. Thus we conclude that ERK pathway, which is an oncogenic MAP kinase pathway, inhibits AP-2 activity thereby suggesting the importance of down regulation of AP-2 activity during transformation. Essential role of DNA-binding domain of AP-2α for its growth inhibitory functions Transcription factor AP-2α has three distinct domains, N-terminal transactivation domain (52-108 aa), C-terminal DNA binding domain (204-408 aa) and dimerization domain (277-395 aa) which lies within the DNA binding domain. AP-2α exerts its effects through binding to specific DNA sequence in the promoter of its target genes leading to either repression or activation. Recent evidences suggest that AP-2α represses many genes through its competitive binding to overlapping AP-2 and other transcription factor binding sites. This suggests an important role exclusively for the DNA binding domain in AP-2α mediated functions. To address the importance of DNA binding domain for AP-2α mediated apoptosis, we have tested the ability different deletion/point mutants of AP-2α with varying DNA binding and transactivation capability to perform growth suppressor function and ability to induce apoptosis. Replication-deficient recombinant adenoviruses expressing different mutants were used in this study. We found that an intact DNA-binding domain alone even in the absence of activation domain is sufficient for AP-2α to inhibit colony formation and to induce significant levels of apoptosis. These results suggest an important role for DNA binding domain growth inhibitory functions of AP-2α and thereby implying the importance of transcriptional repression in AP-2α functions.

Einen Aspekt dieser Arbeit stellt die Analyse der Stimulation von Ratten-Calvaria-Osteoblasten (RCA) mit den beiden Wachstumsfaktoren TGF-b1 und BMP-4 während der Proliferations- sowie Differenzierungs- und Mineralisierungsphase dar. Hierfür soll die Phosphorylierung und Aktivierung von Erk1 und Erk2, sowie von Smad1 und Smad2 mit Hilfe eines Kinase-Aktivitätsassays sowie der Westernblot-Analyse untersucht werden. Im Rahmen dieser Arbeit soll weiterhin untersucht werden, welche Bedeutung die Wachstumsfaktoren TGF-b1 und BMP-4 auf die Aktivität der alkalischen Phosphatase (ALP), einem wichtigen Differenzierungsmarker in Osteoblasten, ausüben. Enzymatische Aktivitätsbestimmungen und zytochemische Färbung aktiver ALP sollen darüber Aufschluss geben. Weiterhin soll der Gehalt an ALP-mRNA durch PCR bestimmt werden. Ein weiteres wichtiges Ziel dieser Arbeit ist die Analyse der Bedeutung von Erk1, Erk2, Smad1 und Smad2 auf die Aktivität der ALP. Dafür sollen Inhibitoren eingesetzt werden. Die enzymatische Aktivitätsbestimmung soll darüber aufklären. Außerdem soll mit Hilfe von kurzen, doppelsträngigen RNA-Molekülen (siRNA) ein knock down der Kinasen herbeigeführt werden und dessen Auswirkung auf die Aktivität der ALP enzymatisch bestimmt werden. Dafür muss zunächst die Wirksamkeit der siRNA auf RNA-Ebene mittels PCR und auf Proteinebene mittels Westernblot-Analysen überprüft werden. Zusätzlich soll die Bedeutung der Wachstumsfaktoren und der Kinasen Erk1 und Erk2 auf die Mineralisierung der RCA analysiert werden. Dafür wird die Menge des zellassoziierten Kalziums und Phosphats experimentell bestimmt, wodurch der Mineralisationsgrad der Zellen wiedergegeben werden kann.

The cytokine tumor necrosis factor α (TNFα) stimulates the NF-кB, SAPK/JNK, and p38 mitogen-activated protein (MAP) kinase pathways by recruiting Rip1 and Traf2 proteins to the tumor necrosis factor receptor 1 (TNFR1). Genetic studies have revealed that Rip1 links the TNFR1 to the IкB kinase (IKK) complex, whereas Traf2 couples the TNFR1 to the SAPK/JNK cascade. We found TNFα-induced p38 MAP kinase activation and interleukin-6 (IL-6) production is impaired in rip1-/- murine embryonic fibroblasts (MEF) but unaffected in traj2-/- MEF, demonstrating that Rip1 is also a specific mediator of the p38 MAP kinase response to TNFα. Moreover, we demonstrate that endogenous Rip1 associates with the MAP3K, Mekk3 in response to TNFα and that TNFα-induced p38 MAP kinase activation is impaired in mekk3-/- cells, indicating that Rip1 may mediate the p38 MAP kinase response to TNFα by recruiting Mekk3. We also demonstrate that Rip1 is phosphorylated and ubiquitinated in response to Tnfα and that Rip1 phosphorylation is not required for ubiquitination of Rip1. Furthermore, TNFα-induced ubiquitination of Rip1 is impaired in Traf2-/- cells, suggesting that Traf2 is the E3 ubiquitin ligase responsible for the TNFα-dependent ubiquitination of Rip1. Finally, recruitment of the ubiquitinated Tak1 complex is dependent on the presence of Rip1, suggesting that Rip1 ubiquitination rather than its phosphorylation is critical in TNFR1 signaling.