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The fluorination of porous materials often leads to the enhancement of properties such as stability, crystallinity and selective adsorption. Although there has been much interest in the fluorination of many types of porous materials, little research has been done on the fluorination of macrocycles, specifically trianglimine and leaning pillararene based materials. In this work, we introduce for the first time highly fluorinated trianglimine and leaning pillararene and show the enhancement effects brought about by the inclusion of fluorinated-phenyl moieties, such as increased stability, surface area, and tendency for self-assembly in our systems. We then show how our fluorinated macrocycles open the door for the formation of extended macrocycle-based polymetric materials simply and in high yields via nucleophilic aromatic substitution. We show for the first time the formation of a trianglimine-based cross-linked polymer and demonstrate its use for micropollutant and gas separation.

Part I: Single sized, pure arylene ether macrocycles ranging from 30 to 60 atom ring sizes were synthesized in good yields (up to 83%) by the two component method under high dilution conditions. These macrocycles have unsymmetric structures containing sulfone/ketone or sulfone/phosphine oxide functional groups and have relatively low melting points. The melt ROP of the single sized macrocycles to form poly(arylene ether)s exhibits two stage characteristics: the first stage is very fast, driven by the large entropy difference between cyclics and linears; the second stage is very slow and is diffusion controlled due to the high viscosity created in the first stage reaction. The latter stage leads to incomplete polymerization at the low initiator concentrations (1-3 mol%). At high initiator concentrations (5-7 mol%), 100% conversion is reached due to improved initiator distribution in macrocycles; however, this reduces molecular weights of the polymers. The molecular weight is found to build up very rapidly, independent of conversion, reaction time and type of initiator. The ROP is initiated by CsF and alkali phenoxides. The efficiency of the alkali counterion is generally in the order of Cs+>K+>Na+, while a phenoxide initiator is more efficient than a fluoride initiator. It is also found that the Cs counterion leads to highest degree of crosslinking. The ROP of cyclic oligomeric mixtures is also reported for comparison; the study shows that the molecular weight depends on time and conversion, and that the conversion is sensitive to the content of linear impurities and the average ring size of cyclic mixtures. Part II: Polyrotaxanes are novel polymeric materials comprised of linear polymer molecules and threaded macrocycles with no covalent bond between the two components. With potential movements of the cyclic component and judicious combinations of the two components of different properties, these materials have brought interesting changes of physical properties, such as morphology, crystallinity, solubility, viscosity, etc. In this part of the dissertation, a new family of polyrotaxanes with poly(arylene ether)s as backbones and crown ethers as cyclic components are described. These include linear poly(arylene ether) based polyrotaxanes and hyperbranched poly(ether ether ketone) based polyrotaxanes; both are synthesized via aromatic nucleophilic substitution reactions. Preliminary studies show that these polymers exhibit great enhancement of solubility. The polymers form emulsions in water and methanol which are normally non-solvents for the poly(arylene ether) backbones. In some cases, they are even soluble in water to form a clear solution. The attempted syntheses of polyrotaxanes using aromatic macrocycles described in Part I was not successful, with no indication of threading. / Ph. D.

Le squelette 1,3,5-triazépane-2,6-dione est un hétérocycle à sept chainons dérivé de dipeptides et accessible en quatre étapes en solution. Une voie de synthèse en parallèle sur support solide de cet hétérocycle a été élaborée. Cette synthèse, qui repose sur les principes de "catch and release" et de cyclo-clivage, a permis la création d’une chimiothèque de plus d’une centaine de composés. Pour augmenter la diversité du squelette 1,3,5-triazépane-2,6-dione, des modifications post-cyclisation peuvent avoir lieu telles que des réactions de N-mono-alkylation ou de N,N-di-alkylation de l’urée, des réactions d’acylation ou bien des réactions de thionation des fonctions carbonyles. De même, la synthèse des cycles analogues aux 1,3,5-triazépane-2,6-diones des tailles plus importantes a été examinée conduisant à l’obtention de plusieurs macrocycles.Les 1,3,5-triazépane-2,6-diones présentent un fort potentiel pour la recherche de molécules d’intérêt thérapeutique puisque le cycle est rigide, non-planaire et possède une bonne capacité de distribution des pharmacophores dans l’espace. Des molécules de cette famille présentent une activité inhibitrice modérée mais spécifique sur les phospholipases A2 secrétées humaines de type V et X. La recherche de nouveaux inhibiteurs de sPLA2 par une étude de relation structure/activité, par création d’une pince à calcium ou par simulation moléculaire a conduit à l’identification de nouveaux composés actifs. / The 1,3,5-triazepane-2,6-dione scaffold is a seven membered heterocycle derived from dipeptides and accessible in a four steps synthesis in solution. A parallel solid phase synthesis of this heterocycle was developed. This strategy, based on "catch and release" and cyclo-cleavage processes, had created a library containing more than one hundred compounds. To increase the diversity of 1,3,5-triazepane-2,6-dione moieties, some post-cyclisation modifications were performed, e.g. urea N-mono-alkylation or N,N-di-alkylation, acylation, and carbonyl thionation. Synthesis of larger cycles was also investigated and several macrocycles were obtained.The 1,3,5-triazepane-2,6-diones have a strong pharmacological interest, because their cycle is rigid, non-planar and can allow multiple presentation of pharmacophores in space. Some 1,3,5-triazepane-2,6-diones have shown a small but specific activity on the groups V and X of the human secreted phospholipases A2. Structure/activity relationships, clamp synthesis to bind calcium or virtual screening were the strategies used to identify new active compounds.

Les iminosucres, analogues de sucres dans lesquels l'oxygène endocyclique a été remplacé par un atome d'azote, constitue une classe importante de mimes de sucres. Aujourd'hui, leurs applications se limitent au domaine biologique car ces composés ont montré un potentiel thérapeutique prometteur. Il serait intéressant d'élargir le domaine d'application de ces iminosucres, et la combinaison de ces structures présentant un azote endocyclique pourrait conduire à de nouveaux macrocycles inédits présentant des propriétés de chélation innovantes. Pour cela, l'introduction d'une chaîne alkyle en position pseudoanomérique donne accès à une nouvelle classe de composés, les iminosucres C-glycosides dont la fonctionnalisation en positions C-5 et C-1 est nécessaire.La première partie de ce travail se focalise sur le développement d'une voie de synthèse rapide et efficace d'iminosucres C-glycosides à six et sept chaînons au moyen d'une réaction tandem de Staudinger aza-Wittig. Pour accéder à ces composés de choix, notre stratégie se base sur des réactions de fonctionnalisation diastéréosélectives et stéréocontrollées. La seconde partie de cette thèse a été consacrée à la synthèse d'iminosucres aza-couronnes, dont les structures constituent un nouveau type de récepteurs moléculaires. L'étude des propriétés de chélation de ces nouveaux macrocycles des cations métalliques a montré des premiers résultats prometteurs et encourageants grâce à des analyses par RMN et par fluorimétrie. / Iminosugars, sugar analogs in which the endocyclic oxygen has been replaced by nitrogen, constitute a major class of sugar mimetics. Their application has been limited to the biological field so far as these compounds have shown promising therapeutic properties[1]. Interestingly, their structural analogy with sugars combined with the presence of an endocyclic nitrogen atom could deliver innovative macrocycles that could display chelation properties as well as catalytic potential when bound to metals and associated as duplex or higher multiplicity scaffolds. For this purpose, efficient introduction of an alkyl chain at the pseudoanomeric position of the iminosugar to yield an iminosugar C-glycoside[2] displaying two arms at C-5 and C-1 position is necessary. The first part of this work focused on the development of an efficient and convergent synthesis of seven and six membered iminosugars C-glycosides using a highly diastereoselective tandem Staudinger-Aza-Wittig reaction is presented. To access to these new compounds, our strategy is based on a highly diastereoselective and stereocontrolled functionalization. The second part of this work is based on the use of these structures to build up unprecedented iminosugar-aza-crowns, a new type of molecular receptors, using the strategy way developed in the first part. These news sweet aza-crowns displaying with various linkages showed promising results through their preliminary chelation properties by NMR and fluorimetric techniques.

Les colorants organiques du proche infrarouge présentent un intérêt majeur dans différent secteurs technologiques. Les travaux présentés dans cette thèse portent sur le développement de ce type de chromophores à partir d’unités quinones possédant une conjugaison électronique particulière : les 2,5-diamino-1,4-benzoquinone-diimines (DABQDI). De nouvelles DABQDI ont pu être synthétisées et leur utilisation comme ligand a notamment permis d’obtenir des complexes absorbant du domaine visible jusqu’à celui du proche infrarouge. Ces unités DABQDI ont également pu être incorporées au sein de macrocycles, analogues de porphyrines, appelés azacalixphyrines, capables d’absorber la lumière jusqu’à 1000 nm. / Near infrared dyes play a significant role in various technological sectors. The present PhD manuscript concerns the development of such chromophores built on quinone units that have a particular electronic delocalization: the 2,5-diamino-1,4-benzoquinone-diimines (DABQDI). New DABQDI have been synthesized and their use as ligand can provide complexes absorbing from the visible to the near infrared domain. DABQDI units were also incorporated in macrocycles, analogous of porphyrins, called azacalixphyrins, able to absorb light up to 1000 nm.

L’objectif de ce travail de thèse était de développer des outils pour détecter et traiter le cancer àun stade précoce. Nous avons donc entrepris la synthèse de nouveaux radiopharmaceutiques ciblantspécifiquement le récepteur CXCR4, en utilisant le savoir-faire et l'expertise de notre groupe dans lasynthèse et la fonctionnalisation des polyazacycloalcanes. Nous avons travaillé simultanément surdeux aspects : l’agent chélatant et la molécule vectrice.Dans un premier temps, les travaux ont concerné la conception, la synthèse et la caractérisationde nouveaux macrocycles à fort potentiel pour la chélation du cuivre et du gallium. Nous avons toutd’abord développé une nouvelle voie de synthèse permettant d’accéder à des dérivés homocyclènesC-functionnalisés. Nous nous sommes ensuite intéressés aux dérivés du 1,4,7-triazacyclononane(TACN). En optimisant une voie de synthèse déjà développée au laboratoire, nous avons facilitél’accès à des dérivés TACN N- et C-fonctionnalisés. Nous avons ainsi préparé une série denouveaux agents chélatants bifonctionnels adaptés pour la complexation du cuivre ou du gallium, envariant la nature de la fonction de greffage et des bras coordinants. Nous avons également réalisé lasynthèse de nouveaux cryptands en série cyclène et nous avons étudié leur propriété decomplexation vis à vis du cuivre.Dans un second temps, nous avons développé une nouvelle famille d’agents imageants duCXCR4 en modifiant la structure des AMD3100 et AMD3465. Ce travail a tout d’abord nécessité lamise au point de nouvelles méthodes de fonctionnalisation de ces structures. Nous avons ainsi pupréparer de nouveaux synthons porteur d’une fonction de greffage dans les deux séries. Nous avonsensuite introduit différentes sondes imageantes, telles que des chélates adaptés pour la complexationdu cuivre, gallium et indium ainsi que des sondes fluorescentes de type bodipy / The objective of this thesis work was to develop CXCR4-targeted tools to localize and treat cancer at an early stage. In this line, we investigated the synthesis of new target-specific radiopharmaceuticals. The work focused on two main axes, i.e. the chelating agent and the carrier, by using the know-how and the expertise of our group in polyazacycloalkanes synthesis and functionalization. In the first part, we were interested in developing new macrocyclic scaffolds of high potential for copper and gallium chelation. We first focused on the development of a new powerful route towards selectively functionalized constrained homocyclens. The second part was based on C-functionalized 1,4,7-triazacyclononane (TACN) and its derivatives. From a synthetic route previously developed in our group, we were able to facilitate and optimize the synthesis of selectively N- and C-functionalized TACN. By varying the grafting functions and the pendant coordinating arms, we prepared several really promising bifunctional chelating agents for copper and gallium chelation. We also investigated the synthesis of new cryptands based on cyclen and we studied their properties towards copper complexation. In the second part of this thesis work, we were interested in generating a new family of imaging agents based on well-known CXCR4 antagonists, i.e. AMD3100 and AMD3465. The access towards these agents first required the preparation of original building blocks by modification of the AMD3100 and AMD3465 cores. The conjugation of such platforms onto the appropriate probe enabled the synthesis of various systems for optical and nuclear imaging. Thus, we were able to introduce a bodipy dye and several chelators adapted for gallium, copper and indium chelation

Further investigations intending illucidate the mechanism of a newly discovered redox-alkylation reaction of azo dyes are presented. Preliminary results indicate that this reaction most probably proceeds via initial N-alkylation of the anion derived from an alpha-ketohydrazone. An investigation is continued to study the synthesis of macrocycle-carbohydrate-dye hybrids. The development of a modular approach to macrocycle assembly has enabled the synthesis of a library of pyridine-based macrocycles possessing multiple donor sites. A central dye scaffold, prepared from the SNAr reaction between halo-substituted azo dye and a disubstituted phenol, was decorated with a representative carbohydrate or macrocycle using Sharpless click chemistry. Also an "S3N-ligand azo-dye" conjugate has been synthesised with a view to the development of a sensor for heavy metal ions. Complexation of this system with Ag(I), Hg(II) and Cu(II) salts has been investigated. Complexation of the dye to metals results in a bathochromic shift in the absorption maximum of the azo dye, an effect which is most pronounced for Cu(II).The Kobayashi fragmentation has transformed the area of benzyne chemistry as it enables its generation from readily available precursors under mild reaction conditions. The controlled generation of benzyne in this manner has been utilised by many groups, allowing readily access to a variety of functionalised aromatic and heteroaromatic from simple precursors. During the course of a synthetic project, which was to utilise the Kobayashi fragmentation in a key intramolecular Diels-Alder reaction, we noticed that alternate modes of fragmentation/rearrangement accompanied the desired elimination reaction leading to benzyne generation. In particular, competing Fries or Smiles rearrangements became the major routes of fragmentation in appropriately functionalised substrates. The results of an investigation into the factors affecting the course of the Kobayashi fragmentation, together with the development of a novel bi-aryl synthesis are presented in this thesis.

One of the most promising routes to create advanced materials is self-assembly. Self-assembly refers to the self-organisation of building blocks to form ordered structures. As the properties of the self-assembled materials will inherit the properties of the basic building blocks, it is then possible to engineer the properties of the materials by tailoring the properties of the building blocks. In order to create mesoscale materials, the self-assembly of molecular building blocks of different sizes and interactions is important. Mesoscopic materials can be obtained by using larger building blocks such as nano and colloidal particles. Colloidal particles are particularly attractive as building blocks because it is possible to design interparticle interactions by controlling both the chemistry of the particles' surface and the properties of the solvent in which the particles are immersed. The self-assembly of spherical colloidal particles has been widely reported in the literature. However, advances in experimental techniques to produce particles with different shapes and sizes have opened new opportunities to create more complex structures that cannot be formed using spherical particles. Indeed, the particles' shape and effective interactions between them dictate the spatial arrangement and micro-structure of the system, which can be engineered to produce functional materials for a wide range of applications. The driving forces determining the self-assembly of colloidal particles can be modified by the use of external influences such as geometrical confinement and electromagnetic forces. Geometrical confinement, for example, has been used to design quasi two-dimensional materials such as multi-layered structures of spheres, dimers, rods, spherical caps, and monolayers of platelets with various geometries and symmetries. In this dissertation, we present three computer simulations studies using Monte Carlo and Molecular Dynamics simulations determining the self-assembly of monolayer colloidal platelets with different shapes confined in two dimensions. These particles have been selected due to recent experiments in colloidal particles with similar shapes. All the particles' models are represented by planar polygons, and three different effects affecting their self-assembly have been analysed: (a) the curvature of the particles' vertices; (b) the curvature of the particles' edges; and finally (c) the addition of functional groups on the particles' surface. These studies aim to demonstrate that the subtle changes on the particle's shape can be used to engineer complex patterns for the fabrication of advanced materials. Monte Carlo simulations are performed to study the self-assembly of colloidal platelets with rounded corners with 4, 5, and 6-fold symmetries. Square platelets provide a rich phase behaviour that ranges between disorder-order and order-order phase transitions. Suprisingly, the disk-like shape of pentagons and hexagons prevents the total crystallisation of these systems, even at a high pressure state. A hysteresis gap is observed by the analysis of compression and expansion runs for the case of square platelets and the thermodynamic method known as direct coexistence method is used to be accurately determined the point of the order-order transition. Further, unexpected results are obtained by performing Molecular Dynamics simulations in systems with platelets with 3, 4, 5, and 6-fold symmetries when all the sides of each polygon are curved. Macroscopic chiral symmetry breaking is observed for platelets with 4 and 6-fold symmetries, and for the first time a rule is promoted to explain when these chiral structures can be formed driven only by packing effects. This unique rule is verified also for platelets with the same curved sides as previously when functional chains tethered to either vertices or sides. Indeed, square platelets with curved sides confined in two dimensions can form chiral structures at medium densities when flexible chains tethered to either vertices or sides. Triangular platelets with curved sides can form chiral structures only when the chains are tethered to the corners, since the chains experience an one-hand rotation to sterically protect one side. When the chains are symmetrically tethered to the sides, local chiral symmetry breaking is observed as both left-hand and right-hand sides on each vertex are sterically protected allowing the same probability for rotation either in clockwise or anticlockwise direction.