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Stochastic Modelling and Intervention of the Spread of HIV/AIDSAsrul Sani Unknown Date (has links)
Since the first cases of HIV/AIDS disease were recognised in the early 1980s, a large number of mathematical models have been proposed. However, the mobility of people among regions, which has an obvious impact on the spread of the disease, has not been much considered in the modelling studies. One of the main reasons is that the models for the spread of the disease in multiple populations are very complex and, as a consequence, they can easily become intractable. In this thesis we provide various new results pertaining to the spread of the disease in mobile populations, including epidemic intervention in multiple populations. We first develop stochastic models for the spread of the disease in a single heterosexual population, considering both constant and varying population sizes. In particular, we consider a class of continuous-time Markov chains (CTMCs). We establish deterministic and Gaussian diffusion analogues of these stochastic processes by applying the theory of density dependent processes. A range of numerical experiments are provided to show how well the deterministic and Gaussian counterparts approximate the dynamic behaviour of the processes. We derive threshold parameters, known as basic reproduction numbers, for both cases above the threshold which the disease is uniformly persistent and below the threshold which disease-free equilibrium is locally attractive. We find that the threshold conditions for both constant and varying population sizes have the same form. In order to take into account the mobility of people among regions, we extend the stochastic models to multiple populations. Various stochastic models for multiple populations are formulated as CTMCs. The deterministic and Gaussian diffusion counterparts of the corresponding stochastic processes for the multiple populations are also established. Threshold parameters for the persistence of the disease in the multiple population models are derived by applying the concept of next generation matrices. The results of this study can serve as a basic framework how to formulate and analyse a more realistic stochastic model for the spread of HIV in mobile heterogeneous populations—classifying all individuals by age, risk, and level of infectivities, and at the same time considering different modes of the disease transmission. Assuming an accurate mathematical model for the spread of HIV/AIDS disease, another question that we address in this thesis is how to control the spread of the disease in a mobile population. Most previous studies for the spread of the disease focus on identifying the most significant parameters in a model. In contrast, we study these problems as optimal epidemic intervention problems. The study is mostly motivated by the fact that more and more local governments allocate budgets over a certain period of time to combat the disease in their areas. The question is how to allocate this limited budget to minimise the number of new HIV cases, say on a country level, over a finite time horizon as people move among regions. The mathematical models developed in the first part of this thesis are used as dynamic constraints of the optimal control problems. In this thesis, we also introduce a novel approach to solve quite general optimal control problems using the Cross-Entropy (CE) method. The effectiveness of the CE method is demonstrated through several illustrative examples in optimal control. The main application is the optimal epidemic intervention problems discussed above. These are highly non-linear and multidimensional problems. Many existing numerical techniques for solving such optimal control problems suffer from the curse of dimensionality. However, we find that the CE technique is very efficient in solving such problems. The numerical results of the optimal epidemic strategies obtained via the CE method suggest that the structure of the optimal trajectories are highly synchronised among patches but the trajectories do not depend much on the structure of the models. Instead, the parameters of the models (such as the time horizon, the amount of available budget, infection rates) much affect the form of the solution.
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Stochastic Modelling and Intervention of the Spread of HIV/AIDSAsrul Sani Unknown Date (has links)
Since the first cases of HIV/AIDS disease were recognised in the early 1980s, a large number of mathematical models have been proposed. However, the mobility of people among regions, which has an obvious impact on the spread of the disease, has not been much considered in the modelling studies. One of the main reasons is that the models for the spread of the disease in multiple populations are very complex and, as a consequence, they can easily become intractable. In this thesis we provide various new results pertaining to the spread of the disease in mobile populations, including epidemic intervention in multiple populations. We first develop stochastic models for the spread of the disease in a single heterosexual population, considering both constant and varying population sizes. In particular, we consider a class of continuous-time Markov chains (CTMCs). We establish deterministic and Gaussian diffusion analogues of these stochastic processes by applying the theory of density dependent processes. A range of numerical experiments are provided to show how well the deterministic and Gaussian counterparts approximate the dynamic behaviour of the processes. We derive threshold parameters, known as basic reproduction numbers, for both cases above the threshold which the disease is uniformly persistent and below the threshold which disease-free equilibrium is locally attractive. We find that the threshold conditions for both constant and varying population sizes have the same form. In order to take into account the mobility of people among regions, we extend the stochastic models to multiple populations. Various stochastic models for multiple populations are formulated as CTMCs. The deterministic and Gaussian diffusion counterparts of the corresponding stochastic processes for the multiple populations are also established. Threshold parameters for the persistence of the disease in the multiple population models are derived by applying the concept of next generation matrices. The results of this study can serve as a basic framework how to formulate and analyse a more realistic stochastic model for the spread of HIV in mobile heterogeneous populations—classifying all individuals by age, risk, and level of infectivities, and at the same time considering different modes of the disease transmission. Assuming an accurate mathematical model for the spread of HIV/AIDS disease, another question that we address in this thesis is how to control the spread of the disease in a mobile population. Most previous studies for the spread of the disease focus on identifying the most significant parameters in a model. In contrast, we study these problems as optimal epidemic intervention problems. The study is mostly motivated by the fact that more and more local governments allocate budgets over a certain period of time to combat the disease in their areas. The question is how to allocate this limited budget to minimise the number of new HIV cases, say on a country level, over a finite time horizon as people move among regions. The mathematical models developed in the first part of this thesis are used as dynamic constraints of the optimal control problems. In this thesis, we also introduce a novel approach to solve quite general optimal control problems using the Cross-Entropy (CE) method. The effectiveness of the CE method is demonstrated through several illustrative examples in optimal control. The main application is the optimal epidemic intervention problems discussed above. These are highly non-linear and multidimensional problems. Many existing numerical techniques for solving such optimal control problems suffer from the curse of dimensionality. However, we find that the CE technique is very efficient in solving such problems. The numerical results of the optimal epidemic strategies obtained via the CE method suggest that the structure of the optimal trajectories are highly synchronised among patches but the trajectories do not depend much on the structure of the models. Instead, the parameters of the models (such as the time horizon, the amount of available budget, infection rates) much affect the form of the solution.
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Automatic Construction Of Trimmed Surface Patches From Unstructured Set Of PointsAdhikary, Nepal 09 1900 (has links) (PDF)
No description available.
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Isogeometric shell analysis and optimization for structural dynamics / Analyse et optimisation des structures coques sous critères dynamiques par approche isogéométriqueLei, Zhen 12 October 2015 (has links)
Cette thèse présente des travaux effectués dans le cadre de l'optimisation de forme de pièces mécaniques, sous critère dynamique, par approche isogéométrique. Pour réaliser une telle optimisation nous mettons en place dans un premier temps les éléments coque au travers des formulations Kirchhoff-Love puis Reissner-Minlin. Nous présentons une méthode permettant d'atteindre les vecteurs normaux aux fibres dans ces formulations au travers de l'utilisation d'une grille mixte de fonctions de base interpolantes, traditionnellement utilisées en éléments finis, et de fonction non interpolantes issues de la description isogéométrique des coques. Par la suite, nous détaillons une méthode pour le couplage de patch puis nous mettons en place la méthode de synthèse modale classique dans le cadre de structures en dynamique décrites par des éléments isogéometriques. Ce travail établit une base pour l'optimisation de forme sous critères dynamique de telles structures. Enfin, nous développons une méthode d'optimisation de forme basée sur le calcul du gradient de la fonction objectif envisagée. La sensibilité de conception est extraite de l'analyse de sensibilité au niveau même du maillage du modèle, qui est obtenue par l'analyse discrète de sensibilité. Des exemples d'application permettent de montrer la pertinence et l'exactitude des approches proposées. / Isogeometric method is a promising method in bridging the gap between the computer aided design and computer aided analysis. No information is lost when transferring the design model to the analysis model. It is a great advantage over the traditional finite element method, where the analysis model is only an approximation of the design model. It is advantageous for structural optimization, the optimal structure obtained will be a design model. In this thesis, the research is focused on the fast three dimensional free shape optimization with isogeometric shell elements. The related research, the development of isogeometric shell elements, the patch coupling in isogeometric analysis, the modal synthesis with isogeometric elements are also studied. We proposed a series of mixed grid Reissner-Minlin shell formulations. It adopts both the interpolatory basis functions, which are from the traditional FEM, and the non-interpolatory basis functions, which are from IGA, to approximate the unknown elds. It gives a natural way to define the fiber vectors in IGA Reissner-Mindlin shell formulations, where the non-interpolatory nature of IGA basis functions causes complexity. It is also advantageous for applying the rotational boundary conditions. A modified reduce quadrature scheme was also proposed to improve the quadrature eficiency, at the same time, relieve the locking in the shell formulations. We gave a method for patch coupling in isogeometric analysis. It is used to connect the adjacent patches. The classical modal synthesis method, the fixed interface Craig-Bampton method, is also used as well as the isogeometric Kirchhoff-Love shell elements. The key problem is also the connection between adjacent patches. The modal synthesis method can largely reduce the time costs in analysis concerning structural dynamics. This part of work lays a foundation for the fast shape optimization of built-up structures, where the design variables are only relevant to certain substructures. We developed a fast shape optimization framework for three dimensional thin wall structure design. The thin wall structure is modelled with isogeometric Kirchhoff-Love shell elements. The analytical sensitivity analysis is the key focus, since the gradient base optimization is normally more fast. There are two models in most optimization problem, the design model and the analysis model. The design variables are defined in the design model, however the analytical sensitivity is normally obtained from the analysis model. Although it is possible to use the same model in analysis and design under isogeomeric framework, it might give either a highly distorted optimum structure or a unreliable structural response. We developed a sensitivity mapping scheme to resolve this problem. The design sensitivity is extracted from the analysis model mesh level sensitivity, which is obtained by the discrete analytical sensitivity analysis. It provides exibility for the design variable definition. The correctness of structure response is also ensured. The modal synthesis method is also used to further improve the optimization eficiency for the built-up structure optimization concerning structural dynamics criteria.
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