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Identification of quantitative trait loci (QTLs) of corn oil in Zea mays L.Schneerman, Martha June Cook. Weber, David F. January 1996 (has links)
Thesis (Ph. D.)--Illinois State University, 1996. / Title from title page screen, viewed May 31, 2006. Dissertation Committee: David F. Weber (chair), Alan J. Katz, Marjorie A. Jones, Radheshyam K. Jayaswal, Jefferey A. Dole. Includes bibliographical references (leaves 96-108) and abstract. Also available in print.
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AnÃlise do potencial produtivo da mamona no Estado do Cearà / ANALYSIS OF THE PRODUCTION POTENTIAL OF CASTOR BEAN IN THE STATE OF CEARÃFelipe Alves Reis 27 February 2009 (has links)
nÃo hà / The general objective of this work is to analyze the productive potential of the castor oil in the state of Cearà from a technical, social and economic approach. To obtaining the results, the research followed the following steps: initially, a study took place to tabulate and describe primary data collected through the application of 118 questionnaires to the growers and 120 to the not growers of the castor oil plant in the districts of Boa Viagem, CanindÃ, Itatira, Pedra Branca, QuixadÃ, Quixeramobim, QuiterianÃplois and TauÃ. Secondly, a binary probit regression was made to verify whether the farmer is a castor oil plant grower or not. Thirdly, a multiple lineal regression of the equation of castor oil plant offer in the State of Cearà was made concerning the period from 1980 to 2007 and this was possible due to secondary data collected in IBGE and IPECE. The analysis of the data allowed to identify the profile of the growers of castor oil plant and of the techniques used in the production. Thus, one can conclude that the farmer's propensity to plant castor oil plant is being influenced by the area, agricultural income, family total income, financing, participation in association and in the credibility of the program. Finally, it was verified that the castor oil plant offer is strongly related with the planted area and with its own price, being necessary investments in technologies and fairer prices. / Este trabalho tem como objetivo geral analisar o potencial produtivo da mamona no estado do Cearà a partir de uma abordagem tÃcnica e socioeconÃmica. Para a obtenÃÃo dos resultados, a pesquisa seguiu as seguintes etapas: inicialmente realizou-se um estudo tabular e descritivo de dados primÃrios coletados atravÃs da aplicaÃÃo de 118 questionÃrios aos produtores e 120 para os nÃo produtores de mamona dos municÃpios de Boa Viagem, CanindÃ, Itatira, Pedra Branca, QuixadÃ, Quixeramobim, QuiterianÃplois e TauÃ. Na segunda parte do estudo, foi realizada uma regressÃo binÃria probit, sobre a chance de o agricultor plantar mamona e, por Ãltimo, realizou-se uma regressÃo linear multipla da equaÃÃo de oferta de mamona no Estado do Cearà no perÃodo de 1980 a 2007, usando dados secundÃrios coletados no IBGE e IPECE. A anÃlise dos dados permitiu identificar o perfil dos produtores de mamona e das tÃcnicas usadas na produÃÃo. Conclui-se entÃo, que a propensÃo do agricultor a plantar mamona està sendo influenciada pela Ãrea, renda agrÃcola, renda total, financiamento, participaÃÃo em associaÃÃo e na credibilidade do programa. Por fim, identificou-se que a oferta de mamona està fortemente relacionada com a Ãrea plantada e com o seu prÃprio preÃo, fazendo-se necessÃrios investimentos em tecnologias e preÃos mais justos.
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Isolation and characterization of antibacterial and antioxidant compounds from rinicus communis leavesNemudzivhadi, Vutshilo January 2015 (has links)
Thesis (M.Sc. (Microbiology)) -- University of Limpopo, 2015 / Antioxidants play an important role in living organisms to control level of free radicals and other reactive molecules in the body to reduce oxidative damage. Synthetic antioxidant compounds are used in food industries as food additives to boost our immune systems. These compounds are associated with a number of critical side effects including liver damage and carcinogenesis. Scientists are also concerned about microorganisms that have developed resistant genes against current antibiotics used in hospitals. The aim of the study was to isolate and characterize bioactive compounds from Ricinus communis leaves with activity against Staphylococcus aureus (ATCC 29213), Enterococcus faecalis (ATCC 29212), Escherichia coli (ATCC 25922) and Pseudomonas aeruginosa (ATCC 27853). Consequently, medicinal plants are studied and considered for their efficacy and safety, because they possess bioactive compounds with various biological activities.
Leaves of R. communis were collected at the University of Limpopo, Turfloop campus in Limpopo province, South Africa. The leaves were dried and milled to a fine powder. A number of trial extraction methods were employed using various solvents of different polarities on a fine powder leaves to identify the best extraction method. Plant extracts were analyzed by thin layer chromatography (TLC) developed in four mobile phases. To detect separated phytochemical compounds, TLC plates were sprayed with vanillin- sulphuric acid in methanol and heated at 110oC for optimal colour development. Qualitative antioxidant activity was determined by using 2, 2–diphenyl-1-picrylhydrazyl (DPPH) assay on TLC plates. Quantitative antioxidant activity was determined by measuring percentages scavenging activity of DPPH and 2, 2’-azinobis-(3-ethylbenzothiazoline-6-sulphonic acid (ABTS) free radical molecules by plant extracts. Antibacterial activity of all extracts was quantified by a serial microbroth dilution method while bioautography was used in qualitative analysis of the active compounds. Cytotoxicity effect of R. communis extracts was evaluated using tetrazolium-based calorimetric assay on human Caucasian skin fibroblast (Bud-8) cell line. Anti-inflammatory activity was assessed using phagoburst kit on Raw 264.7 macrophages cell line. Pure compounds were subjected to nuclear magnetic resonance spectroscopy for 1H, 13C and DEPT experiments to elucidate structures of compounds.
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During extraction process, methanol was the best extractant, extracting greater amount of extracts than any of the other solvents. Serial exhaustive extraction method was selected as the best extraction method for extracting compounds from ground plant materials. In quantitative antioxidant assays, chloroform and methanol extracts had highest percentage scavenging activity against DPPH free radicals compared to other extracts and vitamin C. Methanol extract had the highest percentage scavenging activity of ABTS free radicals and minimum percentage scavenging activity was in hexane extract. Acetone, ethyl acetate and ethanol extracts showed strong antioxidant activity against DPPH free radicals in qualitative antioxidant assay on TLC plates. In quantitative antibacterial assay, crude extracts showed lowest minimum inhibitory concentration value of 0.13 mg/ml against all tested organisms and the highest was 1.05 mg/ml. Hexane extracts revealed potent antibacterial activity against all tested microorganisms on bioautograms. Hexane and acetone extracts also revealed anti-inflammatory activity and have ability to reduce oxidative stress. In cytotoxicity effect of plant extracts, Methanol extracts had lethal concentration for 50% of the cells (Lc50) of 784 μg/ml on Human Caucasian skin fibroblast (Bud-8) cell line while hexane extracts had Lc50 of 629 μg/ml. Plant extracts with high Lc50 are low toxic to normal cell line and preferable to work with for drug development. Bioassay-guided fractionations results in successful isolation of three antioxidant and two antibacterial compounds from R. communis using column chromatography. Isolated compounds were tested for their biological activities using qualitative DPPH assay on TLC plates for antioxidant activity and bioautography for antibacterial activity. Antioxidant compounds showed strong antioxidant activity after spraying with DPPH in methanol and antibacterial compounds showed less activity compared to the crude extracts. The study suggests the use of crude extracts to fight against pathogenic microorganisms compared to pure compounds. Compound 4 was successful identified as the mixture of stigmasterol and β-sitosterol. The present study recommends the use of R. communis leaves as the potential source of antioxidant, antibacterial and anti-inflammatory compounds. The study serves as a scientific proof for use of this plant in traditional medicine for treatment of various ailments.
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Evaluation of ricinus communis semi-purified extracts' potential as anti-metastatic agents using metastatic breast cancer (MCF-7) cancer cellsMabasa, Rixile Forever January 2017 (has links)
Thesis (MSc. (Biochemistry)) -- University of Limpopo, 2017 / The malignancy of cancer cells is responsible for the high death rate in patients diagnosed with metastatic cancers. Medicinal plants represent a reservoir of bioactive compounds that can be useful in the management of cancer. In this study, semi-purified extracts of Ricinus communis leaves were evaluated for their potential to serve as an anti-metastatic agent by using in vitro assays that tested their effects on a number of processes related to metastasis. The exhaustive extraction procedure was employed to generate the crude acetone extracts of R. communis leaves. The crude extracts were then subjected to solvent-solvent fractionation to yield six semi-purified extracts (n-butanol, Chloroform, Ethyl-acetate, n-hexane, Methanol + H2O and H2O). Thin layer chromatography (TLC) was done to determine the phytochemical composition of the semi-purified extracts as well as their antioxidant potential. Non-polar fractions showed to have a diverse mixture of phytochemicals with, however, very limited antioxidant activity. On the other hand, polar fractions showed to have phytochemical compounds with strong antioxidant potential. TLC guided the selection of n-hexane and n-butanol as fractions of great phytochemical diversity and antioxidant activity, respectively. The selected fractions were then assessed for their effect on the viability of normal fibroblasts (BUD-8) and breast (MCF-7) cancer cells using the MTT assay. The n-butanol fraction was shown to significantly decrease the viability of BUD-8 at concentrations above 200 µg/ml. The n-hexane fraction, however, showed to significantly affect the viability of the cells even at lower concentrations. On the positive side, the reduced viability of BUD-8 cells after exposure to both fractions was followed by an increase in cell proliferation after 24 hours suggesting that the extracts exhibited cytostatic rather than cytotoxic effects. Treatment of MCF-7 cells with different concentrations (100-500 µg/ml) of the fractions showed a dose- and time-dependant decrease in cell viability. Hoechst stain also confirmed the non-toxicity of the fractions to MCF-7 cells at 100 and 200 µg/ml. The fractions also showed to possess free radical scavenging activities by reducing the amount of intracellular ROS as demonstrated by the DCFH-DA fluorescent assay. Fluorescence intensity was strongly reduced in cells treated with the fractions and elevated in H2O2-treated and untreated MCF-7 cells. The effect of the fractions on metastasis was assessed by determining their effects on MCF-7 cell migration, attachment and invasiveness using wound healing assay, adhesion assay and Boyden chamber invasion assay, respectively. The wound healing assay showed the fractions to have strong inhibitory activities on the migration of MCF-7 cells. The
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ability of the cells to attach to cell culture treated plates was also greatly reduced in cells treated with the fractions. The n-butanol fraction was demonstrated to exhibit a time- and dose-dependent inhibition on MCF-7 cell invasion by reducing the cells’ capability to penetrate through the matrigel matrix to the bottom of the porous membrane. Gelatin-zymography was done to assess the effect of the n-butanol fraction on activity of MMP-2 and MMP-9. The fraction showed to completely inhibit the gelatinolytic activity of MMP-2 and no band corresponding to the molecular weight of MMP-9 was observed, suggesting that MCF-7 cells produce undetectable levels of MMP-9. The n-butanol fraction further showed to down-regulate the expression of a range of proteins such as MMP-9, uPA, VEGF, TGF-β1 implicated in metastasis and angiogenesis determined using the human angiogenesis antibody array kit. This study demonstrated that the fractions of R. communis extracts have the ability to inhibit major processes of the metastatic cascade by down-regulating the expression of proteins relevant to metastasis. Thus, the fractions can be considered as potential anti-metastatic agents functional in the regulation and/or treatment of malignant of cancers. / National Research Foundation (NRF)
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Diversidade genética em germoplasma de pinhão-manso (Jatropha curcas L.) identificada por marcadores SSR e ISSR / Genetic diversity of physic nut (Jatropha curcas L.) germplasm investigated by SSR and ISSRNucci, Stella Maris 22 August 2011 (has links)
O pinhão-manso (Jatropha curcas) é uma espécie arbórea de ampla distribuição geográfica e com qualidades que a tornam importante do ponto de vista natural, ecológico e principalmente sócio-econômico, pois seus frutos são uma valiosa fonte de óleo vegetal com potencial para produção de biodiesel, proporcionando vantagens ambientais, econômicas e sociais. Este trabalho teve como objetivo avaliar a diversidade genética no germoplasma de pinhão-manso e para isto foram utilizados marcadores moleculares microssatélites e ISSR. A partir de uma biblioteca enriquecida com locos microssatélites foram desenvolvidos 18 pares de primers para a espécie, sendo estes utilizados, juntamente com 30 pares de primers SSR desenvolvidos no CBMEG, visando à caracterização e estudo da estrutura genética populacional. Os acessos dos bancos de germoplasma do CPQBA (Centro Pluridisciplinar de Pesquisas Químicas, Biológicas e Agrícolas) da UNICAMP e da UFS (Universidade Federal de Sergipe) foram avaliados. O germoplasma pertencente ao CPQBA está organizado em 12 populações e o da UFS representado por 17 acessos únicos. Não foi observado polimorfismo entre as populações inviabilizando o estudo populacional. A caracterização dos grupos formados pelos acessos dos bancos de germoplasma foi realizada utilizando 14 marcadores ISSR, revelando que 86,64% da variação genética encontram-se dentro dos grupos e 13,36% entre eles. O número médio total de alelos (na) foi de 1,99 alelos por loco e o número efetivo de alelos (ne) foi de 1,42 alelos por loco. A diversidade genética de Nei (1973) indicou uma baixa diversidade genética dentro dos grupos (0,26), assim como o Índice de Shannon (I) para os acessos (0,41), considerado um baixo valor de diversidade genética. A análise bayesiana alocou todos os acessos avaliados em quatro grupos, todos os acessos apresentaram Q > 0,8. Os grupos formados não apresentaram nenhuma relação com a origem dos acessos. O índice médio de similaridade de Jaccard indicou que existem 30% de similaridade entre os grupos e a amplitude de similaridade variou de 0,23 a 0,94. O dendrograma formou os mesmos quatro grupos de acessos que o formado pela análise bayesiana, tornando ainda mais consistente os resultados obtidos na presente análise. O estudo revela a necessidade e importância de reunir o maior número possível de acessos de diferentes regiões e países para formar o banco de germoplasma da espécie viabilizando a conservação e programas de melhoramento da espécie, haja vista seu promissor potencial para produção de bicombustível. / Physic nut (Jatropha curcas) is a geographically widespread perennial plant species. It is ecologically important in natural communities and economically due to the oil extracted from its fruits that exhibit high potential for biodiesel production, thus, providing environmental, economical and social advantages. The current work aimed to evaluate the genetic diversity in physic nut germplasm using microsatellites and ISSR molecular markers. From a microsatelliteenriched library, 18 primer pairs were developed for the species and were used along with 30 SSR primer pairs developed at CBMEG to characterize and study the population genetic structure. Acessions from the germplasm banks at CPQBA (Centro Pluridisciplinar de Pesquisas Químicas, Biológicas e Agrícolas) from UNICAMP and from UFS (Universidade Federal de Sergipe) were evaluated. The germplasm from CPQBA is organized in 12 populations whereas the accessions from UFS represent 17 soloist accessions. The polymorphism observed between the populations does not impair population genetic studies. The clusters of accessions from the germplasm Banks were characterized using 14 ISSR markers, revealing 86.64% of the genetic diversity are found within the clusters whereas between them, it corresponds to 13.36%. The total average number of alleles per locus (na) corresponded to 1.99 and the effective number of alleles (ne) was of 1.42 alleles per locus. The genetic diversity, investigated as in Nei (1973), indicated a low genetic diversity within the groups (0.26). Shannon index (I) for the accessions evidenced a low value of genetic diversity (0.41). Bayesian analyses of all investigated accessions in four groups demonstrated that all the accessions exhibit Q > 0.8. The clustering patterns did not indicated origin relationships among the accessions. Jaccard average index indicated 30% of similarity between the groups and the amplitude of similarity ranged from 0.23 to 0.94. The dendrogram analysis grouped the four clusters generated by the Bayesian analysis, confirming the consistency of the results. The current study reveals the necessity and importance of gathering as many germplasm accession as possible for the species in order to allow the establishment of conservation and breeding program strategies, considering the potential of the species for biofuel production.
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Diversidade genética em germoplasma de pinhão-manso (Jatropha curcas L.) identificada por marcadores SSR e ISSR / Genetic diversity of physic nut (Jatropha curcas L.) germplasm investigated by SSR and ISSRStella Maris Nucci 22 August 2011 (has links)
O pinhão-manso (Jatropha curcas) é uma espécie arbórea de ampla distribuição geográfica e com qualidades que a tornam importante do ponto de vista natural, ecológico e principalmente sócio-econômico, pois seus frutos são uma valiosa fonte de óleo vegetal com potencial para produção de biodiesel, proporcionando vantagens ambientais, econômicas e sociais. Este trabalho teve como objetivo avaliar a diversidade genética no germoplasma de pinhão-manso e para isto foram utilizados marcadores moleculares microssatélites e ISSR. A partir de uma biblioteca enriquecida com locos microssatélites foram desenvolvidos 18 pares de primers para a espécie, sendo estes utilizados, juntamente com 30 pares de primers SSR desenvolvidos no CBMEG, visando à caracterização e estudo da estrutura genética populacional. Os acessos dos bancos de germoplasma do CPQBA (Centro Pluridisciplinar de Pesquisas Químicas, Biológicas e Agrícolas) da UNICAMP e da UFS (Universidade Federal de Sergipe) foram avaliados. O germoplasma pertencente ao CPQBA está organizado em 12 populações e o da UFS representado por 17 acessos únicos. Não foi observado polimorfismo entre as populações inviabilizando o estudo populacional. A caracterização dos grupos formados pelos acessos dos bancos de germoplasma foi realizada utilizando 14 marcadores ISSR, revelando que 86,64% da variação genética encontram-se dentro dos grupos e 13,36% entre eles. O número médio total de alelos (na) foi de 1,99 alelos por loco e o número efetivo de alelos (ne) foi de 1,42 alelos por loco. A diversidade genética de Nei (1973) indicou uma baixa diversidade genética dentro dos grupos (0,26), assim como o Índice de Shannon (I) para os acessos (0,41), considerado um baixo valor de diversidade genética. A análise bayesiana alocou todos os acessos avaliados em quatro grupos, todos os acessos apresentaram Q > 0,8. Os grupos formados não apresentaram nenhuma relação com a origem dos acessos. O índice médio de similaridade de Jaccard indicou que existem 30% de similaridade entre os grupos e a amplitude de similaridade variou de 0,23 a 0,94. O dendrograma formou os mesmos quatro grupos de acessos que o formado pela análise bayesiana, tornando ainda mais consistente os resultados obtidos na presente análise. O estudo revela a necessidade e importância de reunir o maior número possível de acessos de diferentes regiões e países para formar o banco de germoplasma da espécie viabilizando a conservação e programas de melhoramento da espécie, haja vista seu promissor potencial para produção de bicombustível. / Physic nut (Jatropha curcas) is a geographically widespread perennial plant species. It is ecologically important in natural communities and economically due to the oil extracted from its fruits that exhibit high potential for biodiesel production, thus, providing environmental, economical and social advantages. The current work aimed to evaluate the genetic diversity in physic nut germplasm using microsatellites and ISSR molecular markers. From a microsatelliteenriched library, 18 primer pairs were developed for the species and were used along with 30 SSR primer pairs developed at CBMEG to characterize and study the population genetic structure. Acessions from the germplasm banks at CPQBA (Centro Pluridisciplinar de Pesquisas Químicas, Biológicas e Agrícolas) from UNICAMP and from UFS (Universidade Federal de Sergipe) were evaluated. The germplasm from CPQBA is organized in 12 populations whereas the accessions from UFS represent 17 soloist accessions. The polymorphism observed between the populations does not impair population genetic studies. The clusters of accessions from the germplasm Banks were characterized using 14 ISSR markers, revealing 86.64% of the genetic diversity are found within the clusters whereas between them, it corresponds to 13.36%. The total average number of alleles per locus (na) corresponded to 1.99 and the effective number of alleles (ne) was of 1.42 alleles per locus. The genetic diversity, investigated as in Nei (1973), indicated a low genetic diversity within the groups (0.26). Shannon index (I) for the accessions evidenced a low value of genetic diversity (0.41). Bayesian analyses of all investigated accessions in four groups demonstrated that all the accessions exhibit Q > 0.8. The clustering patterns did not indicated origin relationships among the accessions. Jaccard average index indicated 30% of similarity between the groups and the amplitude of similarity ranged from 0.23 to 0.94. The dendrogram analysis grouped the four clusters generated by the Bayesian analysis, confirming the consistency of the results. The current study reveals the necessity and importance of gathering as many germplasm accession as possible for the species in order to allow the establishment of conservation and breeding program strategies, considering the potential of the species for biofuel production.
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