Phosphoenolpyruvate carboxylase (EC 4.1.1.31; PEPC) is one of the carbon dioxide- fixing enzymes, which yields oxaloacetate from phosphoenolpyruvate and bicarbonate. Regulation of PEPC activity occurs at many levels. In addition to pH and concentration of activators and inhibitors, it is phosphorylation as well. Phosphorylation of PEPC causes a change of kinetic parameters, such as maximal reaction rate, sensitivity to activation or inhibition. Considering that, there is still little information like this about C3 plants and that regulation is in various plant species different, I have dealt with monitoring of the kinetic parameters and regulation possibilities of PEPC isolated from C3 plant sources (Cannabis sativa L., Chenopodium quinoa, Pisum sativum L., Lens culinaris). While the activity of PEPC from leaves of Cannabis sativa L. was decreased by alkaline phosphatase, the activity of PEPC from seeds of Chenopodium quinoa, Pisum sativum L., Lens culinaris was not affected by alkaline phosphatase. The affinity of PEPC from seeds Chenopodium quinoa, Pisum sativum L., Lens culinaris to the substrate PEP was higher than in the case of PEPC from leaves of Cannabis sativa L.. For PEPC from Cannabis sativa L. was found that the apparent dephosphorylation leads to decrease of sensitivity to the...

Las especies vegetales están continuamente desafiadas por un extenso número de microorganismos patógenos en su ambiente natural, principalmente bacterias, hongos y virus. Las plantas cuentan con un amplio arsenal de mecanismos de defensa tanto constitutivos como inducibles frente a estos patógenos. Los mecanismos inducibles incluyen el estadillo oxidativo, muerte celular rápida y localizada, acumulación de fitoalexinas y la síntesis de proteínas relacionadas con la patogénesis (Proteínas PR). Centrándose en las fitoalexinas, estas son compuestos antimicrobianos de bajo peso molecular producidos por las plantas en respuesta a estrés biótico y abiótico. Las fitoalexinas poseen un amplio rango de propiedades antifúngicas en varias especies de plantas. Debido a esto, estos compuestos han sido objeto de numerosos estudios en los últimos 20 años. En la Vid, Vitis vinífera L., la respuesta mejor caracterizada y más frecuente frente a la infección fúngica es la extensa acumulación de fitoalexinas y de proteínas relacionadas con la patogénesis. Entre la gran diversidad de compuestos naturales bioactivos producidos por las especies de Vitis sp. las fitoalexinas están formadas por un grupo reducido de moléculas que pertenecen a la familia de los estilbenos. Las células de vid son capaces de acumular estilnenos en respuesta a estrés biótico y abiótico. Los estilbenos de la vid derivan primariamente del trans-resveratrol (tR) (3,4`,5 -trihidroxiestilbeno), el cual puede sufrir modificaciones químicas, como glicosilación, metilación, hidroxilación y oligomerización, dando lugar a varios derivados bioactivos. tR es producido como producto final de la ruta fenilpropanoide mediante la condensación de tres moléculas de malonil-CoA con una molécula de 4-cumaroil-CoA en una reacción catalizada por la Estilbeno Sintasa (STS). Los estilbenos de la vid han sido ampliamente estudiados ya que poseen unas propiedades en la salud humana sorprendentes. Se han observado beneficios del tR en las principales enfermedades humanas, como agente cardioprotector, como inhibidor de la carcinogénesis, neuro protector y antienvejecimiento entre otros, ya que tR posee un alto efecto antioxidante. Por lo tanto, el interés farmacéutico, nutracéutico y biotecnológico del tR y por tanto de la vid, han ido en aumento desde los últimos 20 años. De la misma manera, la respuesta de defensa ha sido estudiada en cultivos celulares de vid utilizando inductores naturales de esta respuesta. En este sentido, la 2,6 dimetil-ꞵ-ciclodextrina (MBCD) ha demostrado poseer un gran poder elicitor, promoviendo la producción de tR y su acumulación extracelular. Estos estudios han permitido profundizar en los diferentes mecanismos de regulación de la producción de estos compuestos a través de análisis transcriptómicos y proteómicos. Sin embargo, estos análisis revelaron algunos genes y proteínas cuyo papel en esta respuesta es desconocida hasta hoy. Este es el caso de dos parálogos de Fosfoenolpiruvato carboxilasa quinasa (PPCK). La presente tesis doctoral está centrada en el estudio del posible papel regulador de la enzima fosfoenolpiruvato carboxilasa quinasa (PPCK) en la producción de resveratrol y otros metabolitos secundarios en cultivos celulares de vid. La hipótesis principal de esta tesis es que dicha enzima podría estar regulando el flujo del carbono entre el metabolismo primario y secundario, con la finalidad de potenciar este último en condiciones de estrés. Para demostrar esta hipótesis, el contenido de la tesis se divide en 4 capítulos principales. El primer capítulo consiste en el desarrollo de un método analítico basado en espectrometría de masas de triple cuadrupolo para la detección precisa y la cuantificación exacta de resveratrol y sus derivados bioactivos, producidos por la vid. El segundo capítulo es un estudio transcripcional de 2 isoformas de la enzima PPCK, así como el sustrato de esta última (la enzima fosfoenolpiruvato carboxilsa, PPC), en condiciones de estrés, además de estudiar la coexpression con enzimas y factores de transcripción cuyo papel en la producción de resveratrol se conoce con anterioridad. En este capítulo se demuestra tanto en cultivos celulares de vid, como en hojas intactas, que los genes PPCK son fuertemente reprimidos en condiciones de estrés, mientras que los genes PPC permanecen invariables. En cambio se produce un descenso en torno al 20-30% en la actividad específica de la enzima PPC en tales condiciones. Por otro lado, en tales condiciones se observa la correlación entre la represión de los genes PPCK y el incremento en la producción de resveratrol y otros estilbenos. Es conocido que los cambios de actividad en la enzima PPC son debidos a cambios en la fosforilación de la misma, los cuales a su vez son regulados por la PPCK. Por lo tanto el capítulo 3 consiste en el desarrollo de un método para detectar y cuantificar cambios en el patrón de fosforilación de la enzima PPC, adoptando una estrategia de proteómica dirigida. El desarrollo de esté método para la proteína PPC ha permitido observar como el estrés inducido por MBCD provoca un descenso en el grado de fosforilación de la enzima PPC, lo cual correlaciona directamente con el descenso en su actividad específica, y ambos efectos a su vez están correlacionados con la represión génica de su proteína reguladora PPCK. Por último el capítulo 4 es el análisis funcional de los genes PPCK, a través de transformación genética estable de cultivos celulares de vid, con la finalidad de sobreexpresar los genes PPCK, y del silenciamiento genético de los mismos. Los cultivos celulares transformates que sobreexpresaban alguno de los dos parálogos de PPCK resultaron acumular menos resveratrol en condiciones de estrés en comparación con la estirpe silvestre (WT) avalando de esta manera nuestra hipótesis inicial. Además, este efecto no afectaba únicamente a la producción de resveratrol, si no a una gran variedad de metabolitos secundarios producidos en la ruta fenilpropanoide (Flavonoides, taninos condensados, ácidos hidroxicinámicos etc.) sugiriendo que el papel de la enzima PPCK está implicado en la regulación del suministro de carbono hacia esa vía en condiciones de estrés. Por último, el silenciamiento genético tuvo una eficiencia inadecuada, sugiriendo que los genes PPCK pueden ser esenciales, y difícilmente manipulables por en la región metabólica en la que participan. / La presente tesis doctoral ha sido financiada gracias a la subvención de Ministerio de economía y competitividad (BIO2014-51861-R) y (BIO2017- 82374-R). Así mismo, las dos estancias de investigación realizadas en el Integrative Biology Institute, Liverpool University, (Liverpool) han sido financiadas por la Escuela de Doctorado de la Universidad de Alicante, a través del programa de subvenciones para facilitar la obtención de la mención de Doctorado internacional en el título de Doctor y por la European Molecular Biology Organization (EMBO) a través de su programa Short-term Fellowships (ASTF No 7754).

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Estudos anteriores realizados no Laboratório de Fisiologia Vegetal do IBUSP com Guzmania monostachia demonstraram que quando essas plantas são submetidas ao déficit hídrico ocorre a indução do CAM, com maior expressão desse metabolismo na porção foliar apical. Para outra espécie (Vriesea gigantea), foi verificada a maior atividade da enzima nitrato redutase (NR) na porção basal durante o período diurno. Em uma bromélia terrestre (Ananas comosus) foi observada a sinalização por citocininas tanto na indução da expressão gênica, quanto na ativação da NR. Outros laboratórios evidenciaram que plantas de Mesembryanthemum crystallinum induzidas ao CAM apresentaram uma provável regulação negativa da fosfoenolpiruvato carboxilase (PEPC) por citocininas. Em decorrência desses conhecimentos acumulados, surgiram novos questionamentos: haveria variações diuturnas da atividade das enzimas PEPC e NR nas diferentes porções das folhas de G. monostachia induzidas ao CAM? A maior disponibilidade de esqueletos carbônicos à noite (acúmulo de acidez) influenciaria positivamente a atividade da NR, deslocando seu pico de atividade para o período noturno? As variações dos teores endógenos de citocininas acompanhariam as possíveis mudanças da atividade da PEPC e da NR, indicando, assim, a participação dessa classe hormonal na regulação dessas enzimas? O presente trabalho teve por objetivo principal investigar uma possível regulação da atividade das enzimas PEPC e NR por citocininas em folhas destacadas da bromélia epífita com tanque, Guzmania monostachia (Bromeliaceae) induzidas ao CAM. Foi esperado com esta pesquisa aprofundar os estudos sobre a inter-relação entre o comportamento fotossintético, a capacidade de assimilação de nitrogênio e a possível regulação das atividades da PEPC e da NR por citocininas endógenas. Análises de acidez titulável, ácidos orgânicos, amido endógeno e da atividade da enzima malato desidrogenase (MDH) foram realizadas, confirmando a indução do CAM nas folhas isoladas de G. monostachia mantidas em polietilenoglicol (PEG) a uma concentração de 30%. O uso desse composto foi eficiente na redução do conteúdo relativo de água e na imposição da deficiência hídrica foliar. Além disso, pôde-se verificar a maior expressão do CAM na porção apical das folhas mantidas em PEG 30%, quando comparada à porção basal. Análises da atividade da PEPC e da NR permitiram verificar a separação espacial dessas enzimas. A primeira apresentou maior atividade no ápice foliar, enquanto a segunda mostrou a maior atividade na porção basal. Apesar disso, não foi observada a separação temporal dessas enzimas, uma vez que ambas apresentaram picos de atividade noturna. A maior atividade da NR durante o período escuro (01 hora) foi verificada nas folhas-controle ou sob deficiência hídrica. Esse resultado sugere que outros fatores, diferentes do metabolismo CAM, influenciaram para a ocorrência da maior atividade dessa enzima durante o período noturno. Os resultados obtidos ainda sugerem que as citocininas possivelmente atuaram como um regulador negativo para a atividade da PEPC durante o dia, uma vez que os maiores níveis endógenos desse hormônio foram observados durante esse período, enquanto a maior atividade dessa enzima foi verificada durante a noite, quando os teores de Z+iP decaíram significativamente. A aplicação de Z ou iP resultou também num decréscimo da atividade dessa enzima. Por outro lado, as citocininas atuaram como um provável regulador positivo para a atividade da NR, uma vez que a maior atividade noturna dessa enzima foi antecedida em 3 ou 6 horas pelos maiores níveis endógenos de citocininas na porção basal das folhas mantidas em água ou PEG 30%, respectivamente. A aplicação de citocininas-livres aumentou significativamente a atividade da NR na base das folhas destacadas mantidas em água ou PEG 30% / Prior studies undertaken in the Laboratory of Plant Physiology on IBUSP with Guzmania monostachia have shown that during water shortage, CAM induction occurs with greater expression in the apical portion of the leaf. In the case of another species (Vriesea gigantean), more intense nitrate reductase (NR) enzyme activity was observed in the basal portion during the daytime. In a certain terrestrial bromeliad (Ananas comosus), signaling by cytokinins, both in the induction of gene expression as well as NR activation, was observed. According to other laboratories, the cytokinins seem to play a negative regulation of phosphoenolpyruvate carboxylase (PEPC) in CAM induced Mesembryanthemum crystallinum plants. As a result of accumulated knowledge, new questions have arisen, such as: Are there daily variations in PEPC and NR enzymes activity in the different portions of CAM induced leaves of G. monostachia? Would the more pronounced nocturnal availability of carbon skeletons (accumulation of acidity) positively influence NR activity, with consequential displacement of its peak of activity to this period? Would variations in endogenous cytokinins concentration accompany possible changes in PEPC and NR activity, thereby indicating the participation of this hormonal class in their regulation? The main aim in the present study was to investigate the possible regulation of PEPC and NR activity by cytokinins in detached CAM-induced leaves of the epiphyte tank bromeliad Guzmania monostachia (Bromeliaceae). The expectations with this research were to study more deeply the inter-relationship between photosynthetic behavior, the capacity for nitrogen assimilation and the possible regulation of PEPC and NR activity by endogenous cytokinins. Analyses of titratable acidity, organic acids, endogenous starch and malate dehydrogenase (MDH) enzyme activity confirmed CAM induction in isolated leaves of G. monostachia kept in polyethylene glycol (PEG) at a concentration of 30%. The use of this compound was efficient in reducing relative water content and imposing leaf water deficiency. Furthermore, compared to the basal portion, greater CAM expression could be observed in the apical portion of leaves kept in PEG 30%. Analyses of PEPC and NR activity allowed detecting their mutual spatial separation, seeing that, in the first greater activity was concentrated in the leaf apex, while in the second this was more pronounced in the basal portion. Even so, no temporal separation could be observed, since peak of activity for both occurred at night. The peak of nocturnal NR activity (1 hour) was observed in control leaves or those undergoing water deficiency, thereby implying that factors, other than CAM metabolism, exerted an influence on the occurrence of more intense activity of this enzyme at this time. Furthermore, there were indications that cytokinins possibly act as a negative regulator of PEPC activity during the daytime, when the highest endogenous levels of this hormone were observed, whereas it was apparent that the most intense activity of this enzyme actually occurred at night, when Z+iP rates decreased significantly. Z or iP application also induced a decrease in the activity of this enzyme. On the other hand, the cytokinins acted as a positive regulator of NR activity, since the nocturnal peak of activity of this enzyme was preceded by 3 or 6 hours by higher endogenous levels of cytokinins in the basal portion of leaves maintained in water or PEG 30%, respectively. The application of free cytokinins induced a significant increase in NR activity in the base of detached leaves kept in water or PEG 30%

The study was to investigate the changes in (1) triacylglycerol (TAG) contents and its relationship to (2) lipid synthesis- and metabolism-related enzyme activity and (3) their gene expression in cobia (Rachycentron canadum) during the fast growth period (from October 2006 to April 2007) in ventral muscle and liver in Hsiao-Lu-Chiao island in southwestern Taiwan. The crude lipid was 12% for fed diet, 30-40% for liver while 13% in February and 11% to 9% in other month for muscle. The TAG content of crude lipid was 36 % for fed diets, and from 22% (December) to 40% (February) for muscle, and from 63% (October to February) to 47% (March) for liver. Oil red-O (ORO) staining showed that TAG accumulated in muscle in February but in December in liver. Muscle TAG contents and enzyme activities and mRNA levels of GPDH and FAS increased in February. A decrease in GPDH enzyme activity and mRNA levels but an increase in PEPCK enzyme activity and mRNA levels indicate the increased supply of acetyl-CoA for fatty acid synthesis is in muscle. An increase in FATP2 mRNA levels suggest the influx of fatty acid also contributes to increased fatty acid accumulation in muscle.In liver, TAG and fatty acid contents decreased in March April but increased FAS and PEPCK enzyme activity and mRNA levels. It is possible that fatty acid synthesis is enhanced in March, but a fast transport to other organs results in a net decline in liver fatty acid contents and subsequently a decrease in TAG contents. FATP contents decreased in March-April mRNA, indicating that the influx of fatty acid in decreasing in liver in adult fish. GPDH and GAPDH were not related to lipid metabolism in liver. These data from enzyme activity and mRNA level, demonstrated that a potentially increase in acetyl-CoA via PEPCK contributes to fatty acid synthesis and GPDH-mediated synthesis of G-3-P provide the C skeleton for TAG synthesis.

Background: An important role has been suggested for tissue-specific glucocorticoid metabolism in the development of obesity and its complications. 11ß hydroxysteroid dehydrogenase 1 (11ßHSD1) is an enzyme that catalyzes the interconversion of biologically inactive cortisone to active cortisol, thereby regulating its access to glucocorticoid receptors in target tissues. Indeed, an unfavorable metabolic outcome has been associated with increased 11ßHSD1 gene expression and activity in adipose tissue and liver in humans and rodents. Cortisol is an important regulator of phosphoenolpyruvate carboxykinase (PEPCK) a key enzyme in gluconeogenesis and lipid metabolism. In rodents, overexpression of PEPCK in adipose tissue leads to adiposity and increased fatty acid re-esterification. In human obesity, PEPCK has been positively associated with body fat, total cholesterol levels, and plasma triglycerides. However, few studies have addressed the putative reversibility of peripheral cortisol levels and disturbed fatty acid homeostasis that may accompany weight loss. The aim of this thesis was to investigate alterations in peripheral glucocorticoid metabolism in the context of obesity, and putative modulations of glucocorticoid metabolism in the context of weight changes in humans and rodents. Materials & Methods: 11ßHSD1 expression/activity in different adipose tissue depots and liver, the expression of genes involved in adipogenesis and fatty acid homeostasis, and serum levels of adipose tissue-derived adipokines were investigated in severely obese women before and after surgically induced weight loss. The same parameters were measured in female Sprague-Dawley rats fed on high-fat and control diets. Results: In severely obese women, 11ßHSD1 expression was higher in subcutaneous adipose tissue (SAT), while 11ßHSD1 activity and PEPCK expression were higher in the omental depot. In a multivariate analysis, SAT 11ßHSD1 activity was an independent predictor for central fat accumulation. Hepatic 11ßHSD1 activity and levels of intra-abdominal fat storage correlated negatively, while 11ßHSD1 correlated positively with PEPCK in adipose tissue and liver. Weight loss after gastric bypass surgery was followed by significant and metabolically beneficial reductions in subcutaneous 11ßHSD1 and leptin gene expression, as well as reduced circulating leptin and increased adiponectin levels. In contrast, PEPCK gene expression did not change with weight loss. In rats, a high-fat diet did not affect body weight, but was associated with increased serum leptin and decreased adiponectin levels. Short-term, high-fat diet feeding resulted in the up-regulation of SAT 11ßHSD1 expression, while chronic feeding led to its significant down-regulation (compared with the control diet and short-term, high-fat feeding). Interestingly, hepatic 11ßHSD1 expression was constantly downregulated in rats that were fed a high-fat diet. Conclusions: Severe obesity in women was accompanied by a metabolically adverse increase of 11ßHSD1 in adipose tissue, with a concomitant decrease in the liver. Subcutaneous 11ßHSD1 was an independent predictor for central fat accumulation. As weight loss was followed by significant down-regulation of subcutaneous 11ßHSD1, we suggest that up-regulation of this enzyme was a consequence, rather than a cause of obesity. In rodents, a high-fat diet induced dynamic changes in 11ßHSD1 in SAT and liver, both being down-regulated after chronic high-fat feeding without altered weight. In summary, weight changes and alterations in fat and liver glucocorticoid metabolism are closely linked. Moreover, a high-fat diet significantly influences 11ßHSD1 expression/activity in adipose tissue and liver without affecting body weight.

Estudos anteriores realizados no Laboratório de Fisiologia Vegetal do IBUSP com Guzmania monostachia demonstraram que quando essas plantas são submetidas ao déficit hídrico ocorre a indução do CAM, com maior expressão desse metabolismo na porção foliar apical. Para outra espécie (Vriesea gigantea), foi verificada a maior atividade da enzima nitrato redutase (NR) na porção basal durante o período diurno. Em uma bromélia terrestre (Ananas comosus) foi observada a sinalização por citocininas tanto na indução da expressão gênica, quanto na ativação da NR. Outros laboratórios evidenciaram que plantas de Mesembryanthemum crystallinum induzidas ao CAM apresentaram uma provável regulação negativa da fosfoenolpiruvato carboxilase (PEPC) por citocininas. Em decorrência desses conhecimentos acumulados, surgiram novos questionamentos: haveria variações diuturnas da atividade das enzimas PEPC e NR nas diferentes porções das folhas de G. monostachia induzidas ao CAM? A maior disponibilidade de esqueletos carbônicos à noite (acúmulo de acidez) influenciaria positivamente a atividade da NR, deslocando seu pico de atividade para o período noturno? As variações dos teores endógenos de citocininas acompanhariam as possíveis mudanças da atividade da PEPC e da NR, indicando, assim, a participação dessa classe hormonal na regulação dessas enzimas? O presente trabalho teve por objetivo principal investigar uma possível regulação da atividade das enzimas PEPC e NR por citocininas em folhas destacadas da bromélia epífita com tanque, Guzmania monostachia (Bromeliaceae) induzidas ao CAM. Foi esperado com esta pesquisa aprofundar os estudos sobre a inter-relação entre o comportamento fotossintético, a capacidade de assimilação de nitrogênio e a possível regulação das atividades da PEPC e da NR por citocininas endógenas. Análises de acidez titulável, ácidos orgânicos, amido endógeno e da atividade da enzima malato desidrogenase (MDH) foram realizadas, confirmando a indução do CAM nas folhas isoladas de G. monostachia mantidas em polietilenoglicol (PEG) a uma concentração de 30%. O uso desse composto foi eficiente na redução do conteúdo relativo de água e na imposição da deficiência hídrica foliar. Além disso, pôde-se verificar a maior expressão do CAM na porção apical das folhas mantidas em PEG 30%, quando comparada à porção basal. Análises da atividade da PEPC e da NR permitiram verificar a separação espacial dessas enzimas. A primeira apresentou maior atividade no ápice foliar, enquanto a segunda mostrou a maior atividade na porção basal. Apesar disso, não foi observada a separação temporal dessas enzimas, uma vez que ambas apresentaram picos de atividade noturna. A maior atividade da NR durante o período escuro (01 hora) foi verificada nas folhas-controle ou sob deficiência hídrica. Esse resultado sugere que outros fatores, diferentes do metabolismo CAM, influenciaram para a ocorrência da maior atividade dessa enzima durante o período noturno. Os resultados obtidos ainda sugerem que as citocininas possivelmente atuaram como um regulador negativo para a atividade da PEPC durante o dia, uma vez que os maiores níveis endógenos desse hormônio foram observados durante esse período, enquanto a maior atividade dessa enzima foi verificada durante a noite, quando os teores de Z+iP decaíram significativamente. A aplicação de Z ou iP resultou também num decréscimo da atividade dessa enzima. Por outro lado, as citocininas atuaram como um provável regulador positivo para a atividade da NR, uma vez que a maior atividade noturna dessa enzima foi antecedida em 3 ou 6 horas pelos maiores níveis endógenos de citocininas na porção basal das folhas mantidas em água ou PEG 30%, respectivamente. A aplicação de citocininas-livres aumentou significativamente a atividade da NR na base das folhas destacadas mantidas em água ou PEG 30% / Prior studies undertaken in the Laboratory of Plant Physiology on IBUSP with Guzmania monostachia have shown that during water shortage, CAM induction occurs with greater expression in the apical portion of the leaf. In the case of another species (Vriesea gigantean), more intense nitrate reductase (NR) enzyme activity was observed in the basal portion during the daytime. In a certain terrestrial bromeliad (Ananas comosus), signaling by cytokinins, both in the induction of gene expression as well as NR activation, was observed. According to other laboratories, the cytokinins seem to play a negative regulation of phosphoenolpyruvate carboxylase (PEPC) in CAM induced Mesembryanthemum crystallinum plants. As a result of accumulated knowledge, new questions have arisen, such as: Are there daily variations in PEPC and NR enzymes activity in the different portions of CAM induced leaves of G. monostachia? Would the more pronounced nocturnal availability of carbon skeletons (accumulation of acidity) positively influence NR activity, with consequential displacement of its peak of activity to this period? Would variations in endogenous cytokinins concentration accompany possible changes in PEPC and NR activity, thereby indicating the participation of this hormonal class in their regulation? The main aim in the present study was to investigate the possible regulation of PEPC and NR activity by cytokinins in detached CAM-induced leaves of the epiphyte tank bromeliad Guzmania monostachia (Bromeliaceae). The expectations with this research were to study more deeply the inter-relationship between photosynthetic behavior, the capacity for nitrogen assimilation and the possible regulation of PEPC and NR activity by endogenous cytokinins. Analyses of titratable acidity, organic acids, endogenous starch and malate dehydrogenase (MDH) enzyme activity confirmed CAM induction in isolated leaves of G. monostachia kept in polyethylene glycol (PEG) at a concentration of 30%. The use of this compound was efficient in reducing relative water content and imposing leaf water deficiency. Furthermore, compared to the basal portion, greater CAM expression could be observed in the apical portion of leaves kept in PEG 30%. Analyses of PEPC and NR activity allowed detecting their mutual spatial separation, seeing that, in the first greater activity was concentrated in the leaf apex, while in the second this was more pronounced in the basal portion. Even so, no temporal separation could be observed, since peak of activity for both occurred at night. The peak of nocturnal NR activity (1 hour) was observed in control leaves or those undergoing water deficiency, thereby implying that factors, other than CAM metabolism, exerted an influence on the occurrence of more intense activity of this enzyme at this time. Furthermore, there were indications that cytokinins possibly act as a negative regulator of PEPC activity during the daytime, when the highest endogenous levels of this hormone were observed, whereas it was apparent that the most intense activity of this enzyme actually occurred at night, when Z+iP rates decreased significantly. Z or iP application also induced a decrease in the activity of this enzyme. On the other hand, the cytokinins acted as a positive regulator of NR activity, since the nocturnal peak of activity of this enzyme was preceded by 3 or 6 hours by higher endogenous levels of cytokinins in the basal portion of leaves maintained in water or PEG 30%, respectively. The application of free cytokinins induced a significant increase in NR activity in the base of detached leaves kept in water or PEG 30%

Rainbow trout are an important salmonid species whose poor utilization of dietary carbohydrates spurred research investigating molecular and physiological components of its glucoregulation. Among the environmental factors described to exert robust changes in glucose metabolism in rainbow trout, nutrition and social stress are among the most studied: Diets exceeding 20% of carbohydrates and chronic social stress induce hyperglycemia in adult and juvenile rainbow trout, respectively. Common to both responses is a contribution of hepatic de novo gluconeogenesis, which has been described to evade repression in response to high dietary carbohydrate content and to be stimulated in subordinate rainbow trout. Compared to previous studies investigating the regulation of hepatic gluconeogenesis at the molecular level, the recent publication of the annotated rainbow trout genome has opened novel possibilities to investigate paralogue-specific and posttranscriptional regulation of gluconeogenesis. In this thesis, I identify and describe the regulation of the novel phosphoenolpyruvate carboxykinase paralogue pck2b in rainbow trout and identify specific miRNA candidates predicted to contribute to gene paralogue-specific regulation of gluconeogenesis in nutritional and social contexts using small RNA next generation sequencing, real-time RT-PCR and in silico target prediction approaches. In nutritional and social status experiments, in silico predicted targets of differentially expressed hepatic miRNAs are enriched for gluconeogenesis regulation, suggesting a posttranscriptional component in regulating gluconeogenic transcript abundance. Differentially expressed hepatic miRNAs in both experiments comprise evolutionarily conserved and teleost-specific miRNAs, and are indicative of both environmental factor-specific and common regulation of gluconeogenesis transcripts in rainbow trout liver. Together this work provides novel comparative insight into hepatic miRNA-dependent glucoregulation and identifies several specific candidate miRNAs for future functional validation in hepatic glucoregulation in rainbow trout.

Phosphoenolpyruvate carboxykinase (PEPCK) and phosphoenolpyruvate carboxylase (Pepc) are two important CO₂-fixation enzymes which share a similar reaction mechanism. Both operate through a lid-gated active site and have a hypothesized enol-pyruvate intermediate in their catalytic pathway. While PEPCK is an important metabolic enzyme in animals and plays a broad role in cataplerosis, gluconeogenesis and glyceroneogenesis, Pepc reaction in plants catalyzes the first committed step in CO₂ fixation in CAM and C₄ plants via Rubisco. We are studying the structure-function aspects of both enzymes, with a goal of discovering new elements in these enzymes which can modulate catalysis. We have undertaken an interdisciplinary approach for this work and have shown that a combination of experimental and computational techniques can be complementary and can provide novel information. We have determined that in human PEPCK, Tyr235 forms an anion-quadrupole interaction with the carboxylate of PEP and thus positions the latter with respect to the enzyme-bound Mn²+ for optimal phosphoryl transfer and catalysis. We have also identified Pro82 as a catalytically influential residue in this enzyme. Using molecular dynamics simulations we have noted that absence of ligands induces active-site lid opening in GTP-PEPCKS and we have made the first observation of the intermediary structures of the lid opening event, the dynamics of which is an important element that controls GTP-PEPCK catalysis. We have determined the first three-dimensional crystal structure of an archaeal-type Pepc, i.e. C. perfringens PepcA. Our experimental data also provide information about the oligomerization of PepcAs and reveal that aspartate inhibits the C. perfringens enzyme competitively compared to the allosteric inhibition in Pepcs. Structure-based modeling has led to the identification of putative aspartate- and bicarbonate-binding residues in C. perfringens PepcA, of which Arg82, His11, Ser201, Arg390, Lys340, Arg342 and Arg344 probably play an important role. / Ph. D.