Esta tese de doutorado descreve um novo modelo para o acoplamento de difusão química contínua e eventos celulares discretos dentro de um ambiente de simulação biologicamente inspirado. Nosso objetivo é definir e explorar um conjunto minimalista de recursos que também são expressivos, permitindo a criação de padrões 2D complexos usando apenas poucas regras. Por não nos restringirmos a uma grade estática ou regular, mostramos que muitos fenômenos diferentes podem ser simulados, como sistemas tradicionais de reação-difusão, autômatos celulares e padrões de pigmentação de seres vivos. Em particular, demonstramos que a adição de saturação química aumenta significativamente a gama de padrões simulados usando reação-difusão, incluindo padrões que não eram possíveis anteriormente. Nossos resultados sugerem um possível modelo universal que pode integrar abordagens de formação de padrões anteriores, fornecendo nova base para experimentação e texturas de aparência realista para uso geral em Computação Gráfica. / This doctoral thesis describes a novel model for coupling continuous chemical diffusion and discrete cellular events inside a biologically inspired simulation environment. Our goal is to define and explore a minimalist set of features that are also expressive, enabling the creation of complex 2D patterns using just a few rules. By not being constrained into a static or regular grid, we show that many different phenomena can be simulated, such as traditional reaction-diffusion systems, cellular automata, and pigmentation patterns from living beings. In particular, we demonstrate that adding chemical saturation increases significantly the range of simulated patterns using reaction-diffusion, including patterns not possible before. Our results suggest a possible universal model that can integrate previous pattern formation approaches, providing new ground for experimentation and realistic-looking textures for general use in Computer Graphics.

Mr Albert investigated the genetic mechanisms controlling complex floral and vegetative pigmentation patterns in Petunia. He discovered two new MYB transcription factors that control the timing and spatial location of anthocyanin pigment production in flowers and leaves, giving rise to specific colour patterns. He showed that complex pigmentation patterns are formed by tightly controlling the expression of genes required to synthesise anthocyanin pigments and involves proteins that both activate genes and repress them from being expressed. The interactions between distinct classes of transcription factors form an intricate network and hierarchy, allowing fine control of gene expression and strict control of pigment production. These findings will aid in the development of ornamental plants with new pigmentation patterns and also this research serves as a model for how plants control the expression of genes to produce health-promoting plant compounds.

Mr Albert investigated the genetic mechanisms controlling complex floral and vegetative pigmentation patterns in Petunia. He discovered two new MYB transcription factors that control the timing and spatial location of anthocyanin pigment production in flowers and leaves, giving rise to specific colour patterns. He showed that complex pigmentation patterns are formed by tightly controlling the expression of genes required to synthesise anthocyanin pigments and involves proteins that both activate genes and repress them from being expressed. The interactions between distinct classes of transcription factors form an intricate network and hierarchy, allowing fine control of gene expression and strict control of pigment production. These findings will aid in the development of ornamental plants with new pigmentation patterns and also this research serves as a model for how plants control the expression of genes to produce health-promoting plant compounds.

Mr Albert investigated the genetic mechanisms controlling complex floral and vegetative pigmentation patterns in Petunia. He discovered two new MYB transcription factors that control the timing and spatial location of anthocyanin pigment production in flowers and leaves, giving rise to specific colour patterns. He showed that complex pigmentation patterns are formed by tightly controlling the expression of genes required to synthesise anthocyanin pigments and involves proteins that both activate genes and repress them from being expressed. The interactions between distinct classes of transcription factors form an intricate network and hierarchy, allowing fine control of gene expression and strict control of pigment production. These findings will aid in the development of ornamental plants with new pigmentation patterns and also this research serves as a model for how plants control the expression of genes to produce health-promoting plant compounds.

Mr Albert investigated the genetic mechanisms controlling complex floral and vegetative pigmentation patterns in Petunia. He discovered two new MYB transcription factors that control the timing and spatial location of anthocyanin pigment production in flowers and leaves, giving rise to specific colour patterns. He showed that complex pigmentation patterns are formed by tightly controlling the expression of genes required to synthesise anthocyanin pigments and involves proteins that both activate genes and repress them from being expressed. The interactions between distinct classes of transcription factors form an intricate network and hierarchy, allowing fine control of gene expression and strict control of pigment production. These findings will aid in the development of ornamental plants with new pigmentation patterns and also this research serves as a model for how plants control the expression of genes to produce health-promoting plant compounds.

Esta tese de doutorado descreve um novo modelo para o acoplamento de difusão química contínua e eventos celulares discretos dentro de um ambiente de simulação biologicamente inspirado. Nosso objetivo é definir e explorar um conjunto minimalista de recursos que também são expressivos, permitindo a criação de padrões 2D complexos usando apenas poucas regras. Por não nos restringirmos a uma grade estática ou regular, mostramos que muitos fenômenos diferentes podem ser simulados, como sistemas tradicionais de reação-difusão, autômatos celulares e padrões de pigmentação de seres vivos. Em particular, demonstramos que a adição de saturação química aumenta significativamente a gama de padrões simulados usando reação-difusão, incluindo padrões que não eram possíveis anteriormente. Nossos resultados sugerem um possível modelo universal que pode integrar abordagens de formação de padrões anteriores, fornecendo nova base para experimentação e texturas de aparência realista para uso geral em Computação Gráfica. / This doctoral thesis describes a novel model for coupling continuous chemical diffusion and discrete cellular events inside a biologically inspired simulation environment. Our goal is to define and explore a minimalist set of features that are also expressive, enabling the creation of complex 2D patterns using just a few rules. By not being constrained into a static or regular grid, we show that many different phenomena can be simulated, such as traditional reaction-diffusion systems, cellular automata, and pigmentation patterns from living beings. In particular, we demonstrate that adding chemical saturation increases significantly the range of simulated patterns using reaction-diffusion, including patterns not possible before. Our results suggest a possible universal model that can integrate previous pattern formation approaches, providing new ground for experimentation and realistic-looking textures for general use in Computer Graphics.

Esta tese de doutorado descreve um novo modelo para o acoplamento de difusão química contínua e eventos celulares discretos dentro de um ambiente de simulação biologicamente inspirado. Nosso objetivo é definir e explorar um conjunto minimalista de recursos que também são expressivos, permitindo a criação de padrões 2D complexos usando apenas poucas regras. Por não nos restringirmos a uma grade estática ou regular, mostramos que muitos fenômenos diferentes podem ser simulados, como sistemas tradicionais de reação-difusão, autômatos celulares e padrões de pigmentação de seres vivos. Em particular, demonstramos que a adição de saturação química aumenta significativamente a gama de padrões simulados usando reação-difusão, incluindo padrões que não eram possíveis anteriormente. Nossos resultados sugerem um possível modelo universal que pode integrar abordagens de formação de padrões anteriores, fornecendo nova base para experimentação e texturas de aparência realista para uso geral em Computação Gráfica. / This doctoral thesis describes a novel model for coupling continuous chemical diffusion and discrete cellular events inside a biologically inspired simulation environment. Our goal is to define and explore a minimalist set of features that are also expressive, enabling the creation of complex 2D patterns using just a few rules. By not being constrained into a static or regular grid, we show that many different phenomena can be simulated, such as traditional reaction-diffusion systems, cellular automata, and pigmentation patterns from living beings. In particular, we demonstrate that adding chemical saturation increases significantly the range of simulated patterns using reaction-diffusion, including patterns not possible before. Our results suggest a possible universal model that can integrate previous pattern formation approaches, providing new ground for experimentation and realistic-looking textures for general use in Computer Graphics.