1 |
Neuroimaging in Alzheimer's disease : a longitudinal prospective clinicopathological studyJobst, Kim Anthony January 1996 (has links)
No description available.
|
2 |
Valoración de la viabilidad miocárdica mediante SPET miocárdico de perfusión con 99mTecnecio-Metoxi-Isobutil-IsonitrilloGonzález González, José Manuel 14 December 2001 (has links)
El objetivo de este estudio ha sido valorar la eficacia del SPET miocárdico de perfusión con 99mTc-MIBI en la predicción de la mejoría de la contractilidad post-revascularización. Pacientes y metodología: Se estudiaron 82 pacientes (59+/-10 años, 12 mujeres) mediante SPET en reposo con 99mTc-MIBI y 38 pacientes mediante SPET en reposo/reinyección con 201-Talio (57+/-9 años, 2 mujeres), que presentaban al menos un segmento con severa alteración de la contractilidad y que fueron sometidos a revascularización coronaria mediante cirugía (64 del grupo estudiado con 99mTc-MIBI y 25 del grupo del 201-Talio) o angioplastia (18 y 13 respectivamente). Se practicó una ventriculografía isotópica en equilibrio en tres proyecciones antes y a los 3-6 meses de la revascularización . El ventrículo izquierdo se dividió en 9 segmentos en los que se cuantificó la captación de 99mTc-MIBI o 201-Talio y la contractilidad regional. A 40 de los 82 pacientes estudiados con 99mTc-MIBI se les practicó además un SPETde esfuerzo pre-revascularización.Resultados: El valor medio de fracción de eyección no se modificó tras la revascularización en ninguno de lo dos grupos de pacientes (41+/-14% vs 42+/-16% en el grupo del 99mTc-MIBI y 39+/-14% vs 40+/-15 % en el grupo del 201-Talio). No hubieron diferencias en el porcentaje de pacientes estudiados con 99mTc-MIBI y con 201-Talio que mejoraron (24% vs 26%), empeoraron (18% vs 19%) o no modificaron (58% vs 55%) la fracción de eyección tras la revascularización. El porcentaje de segmentos disfuncionantes que mejoró fue del 47% en el grupo del 99mTc-MIBI y del 54 % en el 201-Talio. Se evidenció un incremento significativo de la sensibilidad (52%, 72% y 91%, p<0,0001 en el grupo del 99mTc-MIBI y 42%, 80% y 96%, p=0.001 en el grupo del 201-Talio) al considerar los niveles de captación en reposo del 50%, 40% y 30% respectivamente. En el grupo de 40 pacientes estudiados con 99mTc-MIBI a los que se practicó SPET de esfuerzo, se evidenció reversibilidad esfuerzo-reposo en 50 (63%) de los 80 segmentos que mejoraron post-revascularización y 30 segmentos (37%) no mostraron reversibilidad (p<0,0001). Conclusiones: Los mejores resultados del SPET con 99mTc-MIBI para el diagnóstico de viabilidad miocárdica se han obtenido considerando como criterio de viabilidad una captación superior al 30%. No existen diferencias significativas entre los resultados obtenidos con 99mTc-MIBI y con 201-Talio. Es recomendable la práctica de un SPET de esfuerzo pre-revascularización, ya que la demostración de isquemia es un signo de viabilidad miocárdica. / The aim of this study is to analyze the yield of 99mTc-MIBI in the prediction of functional recovery after revascularization.Methods: Were studied 82 patients (mean age 59+/-10, 12 women) with rest 99mTc-MIBI SPET and 38 patients (mean age 57+/-9, 2 women) with rest/reinjection 201-Thallium SPET, who underwent coronary artery bypass grafting (64 in 99mTc-MIBI group and 25 in 201-Thallium group) or PTCA (18 and 13 respectively). Three views radionuclide ventriculography were performed before and 3-6 months after revascularization. Regional contractility and radiotracer uptake were evaluated in 9 left ventricular segments. 40 patients of 99mTc-MIBI group, a stress study was also performed.Results: No change was observed in mean left ventricular ejection fraction pre and post-revascularization (99mTc-MIBI: 41+/-14% vs 42+/-16% and 201-Thallium: 39+/-14 vs 40+/-15%). 24% of patients of 99mTc-MIBI group and 26% of patients of 201-Thallium group increased ejection fraction, 18% and 19% respectively decreased ejection fraction and 58% and 55% did not change ejection fraction after revascularization.47% of segments (99mTc-MIBI) and 54% of segments (201-Thallium) with severe impairment of regional contractility improved after revascularization. Significant increase of sensitivity (99mTc-MIBI: 52%, 72% and 91%, p<0,0001, 201-Thallium: 42%, 80% and 96%, p=0.001) was observed according to rest uptake level of 50%, 40% and 30%. In the 40 patients of 99mTc-MIBI group who underwent stress-rest test, 80 segments improved contractility after revascularization: 50 segments (63%) were present reversibility and 30 segments (37%) no reversibility (p<0,0001).Conclusions: Rest uptake level > 30% is the viability criteria for 99mTc-MIBI SPET with better results to predict myocardial viability. No differences were observed in the results of 99mTc-MIBI and 201-Thallium SPET in the prediction of functional recovery after revascularization. Stress-rest reversibility are criteria of contractile recovery after revascularization.
|
3 |
Linking Genetic Resources, Genomes and Phenotypes of Solanaceus CropsAlonso Martín, David 30 November 2024 (has links)
[ES] El impacto del cambio climático en los cultivos hortícolas es cada vez más evidente, lo que ha llevado a la pérdida y erosión de diversidad genética de manera drástica. Esto plantea importantes desafíos para la mejora de los cultivos, que requiere la exploración de los recursos fitogenéticos conservados en los bancos de germoplasma y el desarrollo de tecnologías que permitan evaluar el valor fenotípico y genotípico de estos materiales. Sin embargo, la situación actual de las colecciones de germoplasma es la existencia de duplicados no identificados entre colecciones, errores en la clasificación taxonómica, documentación insuficiente y no disponible para investigadores y mejoradores, añadido a la falta de financiación para la conservación y gestión adecuadas. Esto dificulta enormemente la utilización de estos recursos. En la presente Tesis se aborda este problema comenzando por la unificación de datos de pasaporte, fenotipado e imágenes de las principales colecciones de tomate, pimiento y berenjena en un mismo repositorio en el primer capítulo.
El segundo capítulo se centra en el desarrollo y optimización de un método de extracción de ADN genómico de alta calidad, rápido y económico que combina las ventajas del método de extracción basado en el CTAB, añadido a la purificación de los ácidos nucleicos en una matriz de sílice. Es un método universal que puede utilizarse para diferentes especies y tejidos. Se ha evaluado la eficiencia del ADN genómico resultante en diferentes plataformas de secuenciación como SPET (Single Primer Enrichment Technology) y Oxford Nanopore, generando resultados muy prometedores. Esto facilita el paso previo al genotipado de las colecciones que es la extracción de ADN.
En el tercer capítulo se aborda el genotipado de las colecciones. El elevado número de accesiones de cada cultivo, en particular el tomate, supone un problema de tipo económico, en ocasiones irresoluble. Por ello, el tercer capítulo está orientado a la evaluación del potencial de la tecnología de secuenciación SPET, más económica que otras conocidas, para el genotipado de alto rendimiento de colecciones de germoplasma de tomate y berenjena. Los resultados revelan que el genotipado SPET es una tecnología robusta y de alto rendimiento para estudios genéticos, incluyendo la posibilidad de identificación de duplicados y errores de clasificación taxonómica en las entradas conservadas en los bancos. Con la información generada en los primeros tres capítulos se establecieron las colecciones nucleares para cada cultivo, abarcando la máxima diversidad genética y fenotípica en un conjunto de 450 individuos.
Finalmente, en el cuarto capítulo, se analiza y describe la colección nuclear de tomate a nivel genético y fenotípico, mediante un enfoque basado en el establecimiento de grupos genéticos basados en su proximidad genética. El análisis de la diversidad genética y fenotípica reveló patrones de variación distintos entre diferentes grupos genéticos, contradiciendo afirmaciones anteriores que proponían una disminución en la diversidad genética como consecuencia de la mejora genética y descubriendo correlaciones entre rasgos morfológicos únicas dentro de los diferentes grupos.
En resumen, esta tesis aumenta el conocimiento y accesibilidad a las colecciones de Solanaceae en bancos de germoplasma y proporciona herramientas moleculares. Destaca la importancia de estos bancos como reservorios de diversidad genética, aunque enfrenten desafíos como datos limitados y duplicados. Estos avances sientan las bases para la conservación y programas de mejora futuros. / [CA] L'impacte del canvi climàtic en els cultius hortícoles és cada vegada més evident, la qual cosa ha portat a la dràstica pèrdua i erosió de la diversitat genètica. La reduïda diversitat genètica planteja importants reptes per a la millora dels cultius. Sent necessari l'exploració dels recursos genètics vegetals conservats en els bancs de germoplasma i el desenvolupament de tecnologies que permeten avaluar el valor fenotípic i genotípic d'aquests materials. Pel que fa a les col·leccions de germoplasma presenten duplicats no identificats entre col·leccions, errors en la classificació taxonòmica, falta de finançament per a la conservació i gestió adequades a banda de documentació insuficient i no disponible (investigadors i milloradors vegetals). En la present tesi doctoral en el primer capítol s'aborda aquest problema unificant les dades de passaport, fenotipat i imatges de les principals col·leccions de tomaca, pebre i albergínia en un mateix repositori.
El segon capítol es focalitza en el desenvolupament i optimització d'un mètode d'extracció de ADN genòmic d'alta qualitat, ràpid i econòmic que combina els avantatges del mètode d'extracció basat en el CTAB amb l'ús de matrius de sílice. El mètode desenvolupat pot utilitzar-se de manera universal per a diferents espècies i teixits vegetals. S'ha avaluat l'eficiència del ADN genòmic resultant en diferents plataformes de seqüenciació com SPET (Single Primer Enrichment Technology) i Oxford Nanopore, generant resultats molt prometedors. Això facilita el pas previ al genotipat de les col·leccions que és l'extracció d'ADN.
En el tercer capítol aborda l'optimització del procés de genotipat de les col·leccions generades. L'elevat nombre d'accessions de cada cultiu, en particular la tomaca, suposa un problema de tipus econòmic, a vegades irresoluble. Per això, aquest capítol està orientat a l'avaluació del potencial de la tecnologia de seqüenciació SPET per al genotipat d'alt rendiment de col·leccions de germoplasma de tomaca i albergínia a un preu econòmic. Els resultats revelen que el genotipat SPET és una tecnologia robusta i d'alt rendiment per a estudis genètics, incloent-hi la possibilitat d'identificació de duplicats i errors de classificació taxonòmica en les entrades conservades en els bancs de germoplasma. La informació generada va permetre establir col·leccions nuclears per a cada cultiu, abastant la màxima diversitat genètica i fenotípica en un conjunt de 450 individus.
Finalment, en el quart capítol, s'analitza i descrigué la col·lecció nuclear de tomaca a nivell genètic i fenotípic, focalitzant-se en l'establiment de grups genètics basats en la seua proximitat genètica. L'anàlisi de la diversitat genètica i fenotípica va revelar patrons de variació diferents entre diferents grups genètics, contradient afirmacions anteriors que proposaven una disminució en la diversitat genètica a conseqüència de la millora genètica. També és descobriren noves correlacions entre trets morfològics únics dins dels diferents grups. L'estudi destaca la importància d'abordar les iniciatives de millora de la tomaca tenint en compte tant la diversitat genètica com la fenotípica, amb especial èmfasi en aspectes com la grandària, la forma, el color i la qualitat del fruit.
En definitiva, els treballs realitzats en aquesta tesi doctoral augmenten, d'una banda, el coneixement i l'accessibilitat a les principals col·leccions de solanàcies conservades en els bancs de germoplasma. Per un altre, generen eines moleculars que permeten l' avaluació genotípica de les col·leccions analizades. En resum, aquests avanços suposen una base per al futur, proporcionant informació valuosa per a la pròpia conservació de les col·leccions i el seu ús en programes de millora. / [EN] The impact of climate change on horticultural crops is increasingly evident, leading to drastic loss and erosion of genetic diversity. This poses significant challenges for crop improvement, which requires the exploration of plant genetic resources conserved in germplasm banks and the development of technologies. However, the current situation of germplasm collections is characterized by the existence of unidentified duplicates among collections, taxonomic mislabelling, insufficient and unavailable documentation for researchers and breeders, and a lack of funding for proper conservation and management. This greatly hampers the utilization of these resources. This thesis addresses this problem by starting with the unification of passport, phenotyping, and image data from the main collections of tomato, pepper, and eggplant. Genotyping these collections enables the creation of core collections, enhancing knowledge of genotypic and phenotypic variability for researchers and breeders.
In the first chapter, an inventory of available passport and phenotypic data of tomato, pepper, and eggplant accessions conserved in major European and non-European germplasm banks were conducted to improve the efficiency of plant genetic resource management.
The second chapter focuses on the development and optimization of a high-quality, fast, and cost-effective genomic DNA extraction method that combines the advantages of the CTAB-based extraction method with nucleic acid purification on a silica matrix. The efficiency of the resulting genomic DNA was evaluated on different sequencing platforms, such as Single Primer Enrichment Technology (SPET) and Oxford Nanopore, yielding promising results. This facilitates the prerequisite step of DNA extraction before genotyping the collections.
Chapter three addresses the genotyping of the collections. The high number of accessions for each crop, particularly tomato, poses an often insurmountable economic problem. Therefore, chapter three is focused on evaluating the potential of SPET sequencing technology, which is more cost-effective than other known methods, for high-throughput genotyping of tomato and eggplant germplasm collections. The results reveal that SPET genotyping is a robust and high-performance technology for genetic studies, including the identification of duplicates and taxonomic misclassifications in the accessions stored in the germplasm banks. Based on the information generated in the first three chapters, core collections were established for each crop, encompassing maximum genetic and phenotypic diversity in a set of 450 individuals.
Finally, in the fourth chapter, the genetic and phenotypic analysis of the tomato core collection is examined and described using an approach based on establishing genetic groups based on their genetic proximity. Genetic and phenotypic diversity analysis revealed distinct patterns of variation among different genetic groups, contradicting previous claims of a decrease in genetic diversity due to genetic improvement and uncovering unique correlations between morphological traits within different groups. The study highlights the importance of considering both genetic and phenotypic diversity in tomato breeding initiatives, with a particular emphasis on aspects such as fruit size, shape, color, and quality.
In conclusion, this thesis enhances knowledge and accessibility to major Solanaceae collections in germplasm banks, while providing molecular tools for genotypic evaluation. It underscores germplasm banks' role as genetic diversity reservoirs, despite challenges such as data limitations and inaccuracies, emphasizing the importance of data standardization and maintenance. These advancements lay a foundation for conservation and breeding programs in the future. / This work was supported by grants CIPROM/2021/020 from Conselleria d’Innovació, Universitats, Ciència i Societat Digital (Generalitat Valenciana, Spain), PID2021-128148OB-I00 funded by MCIN/AEI/10.13039/501100011033/ and by “ERDF A way of making Europe”, PDC2022-133513-I00 funded by MCIN/AEI/10.13039/501100011033/, and by “European Union NextGenerationEU/PRTR”, by Grant Agreement No. 677379 (G2P-SOL project: Linking genetic resources, genomes and phenotypes of Solanaceous crops) from European Union’s Horizon 2020 Research and Innovation Programme, by the Grant Agreement No. 101094738 (PRO-GRACE project: Promoting a Plant Genetic Resource Community for Europe) from the European Union’s Horizon Europe programme, as well as by the initiative "Adapting Agriculture to Climate Change: Collecting, Protecting and Preparing Crop Wild Relatives", which is supported by the Government of Norway. This later project is managed by the Global Crop Diversity Trust with the Millennium Seed Bank of the Royal Botanic Gardens, Kew and implemented in partnership with national and international gene banks and plant breeding institutes around the world. For further information, see the project website: htp://www.cwrdiversity.org/. The overall work also partially fulfils some goals of the Agritech National Research Center and received funding from the European Union Next-Generation EU (PIANO NAZIONALE DI RIPRESA E RESILIENZA (PNRR)–MISSIONE 4 COMPONENTE 2, INVESTIMENTO 1.4—D.D. 1032 17/06/2022, CN00000022). David Alonso is grateful to Universitat Politècnica de València for a predoctoral (PAID-01-16) / Alonso Martín, D. (2023). Linking Genetic Resources, Genomes and Phenotypes of Solanaceus Crops [Tesis doctoral]. Universitat Politècnica de València. https://doi.org/10.4995/Thesis/10251/201550
|
4 |
Novel computational methods for image analysis and quantification using position sensitive radiation detectorsSanchez Crespo, Alejandro January 2005 (has links)
<p>The major advantage of position sensitive radiation detector systems lies in their ability to non invasively map the regional distribution of the emitted radiation in real-time. Three of such detector systems were studied in this thesis, gamma-cameras, positron cameras and CMOS image sensors. A number of physical factors associated to these detectors degrade the qualitative and quantitative properties of the obtained images. These blurring factors could be divided into two groups. The first group consists of the general degrading factors inherent to the physical interaction processes of radiation with matter, such as scatter and attenuation processes which are common to all three detectors The second group consists of specific factors inherent to the particular radiation detection properties of the used detector which have to be separately studied for each detector system. Therefore, the aim of this thesis was devoted to the development of computational methods to enable quantitative molecular imaging in PET, SPET and in vivo patient dosimetry with CMOS image sensors.</p><p>The first task was to develop a novel quantitative dual isotope method for simultaneous assessments of regional lung ventilation and perfusion using a SPET technique. This method included correction routines for photon scattering, non uniform attenuation at two different photon energies (140 and 392 keV) and organ outline. This quantitative method was validated both with phantom experiments and physiological studies on healthy subjects.</p><p>The second task was to develop and clinically apply a quantitative method for tumour to background activity uptake measurements using planar mammo-scintigraphy, with partial volume compensation.</p><p>The third stage was to produce several computational models to assess the spatial resolution limitations in PET from the positron range, the annihilation photon non-collineairy and the photon depth of interaction.</p><p>Finally, a quantitative image processing method for a CMOS image sensor for applications in ion beam therapy dosimetry was developed.</p><p>From the obtained phantom and physiological results it was concluded that the methodologies developed for the simultaneous measurement of the lung ventilation and perfusion and for the quantification of the tumour malignancy grade in breast carcinoma were both accurate. Further, the obtained models for the influence that the positron range in various human tissues, and the photon emission non-collinearity and depth of interaction have on PET image spatial resolution, could be used both to optimise future PET camera designs and spatial resolution recovery algorithms. Finally, it was shown that the proton fluence rate in a proton therapy beam could be monitored and visualised by using a simple and inexpensive CMOS image sensor.</p>
|
5 |
Novel computational methods for image analysis and quantification using position sensitive radiation detectorsSanchez Crespo, Alejandro January 2005 (has links)
The major advantage of position sensitive radiation detector systems lies in their ability to non invasively map the regional distribution of the emitted radiation in real-time. Three of such detector systems were studied in this thesis, gamma-cameras, positron cameras and CMOS image sensors. A number of physical factors associated to these detectors degrade the qualitative and quantitative properties of the obtained images. These blurring factors could be divided into two groups. The first group consists of the general degrading factors inherent to the physical interaction processes of radiation with matter, such as scatter and attenuation processes which are common to all three detectors The second group consists of specific factors inherent to the particular radiation detection properties of the used detector which have to be separately studied for each detector system. Therefore, the aim of this thesis was devoted to the development of computational methods to enable quantitative molecular imaging in PET, SPET and in vivo patient dosimetry with CMOS image sensors. The first task was to develop a novel quantitative dual isotope method for simultaneous assessments of regional lung ventilation and perfusion using a SPET technique. This method included correction routines for photon scattering, non uniform attenuation at two different photon energies (140 and 392 keV) and organ outline. This quantitative method was validated both with phantom experiments and physiological studies on healthy subjects. The second task was to develop and clinically apply a quantitative method for tumour to background activity uptake measurements using planar mammo-scintigraphy, with partial volume compensation. The third stage was to produce several computational models to assess the spatial resolution limitations in PET from the positron range, the annihilation photon non-collineairy and the photon depth of interaction. Finally, a quantitative image processing method for a CMOS image sensor for applications in ion beam therapy dosimetry was developed. From the obtained phantom and physiological results it was concluded that the methodologies developed for the simultaneous measurement of the lung ventilation and perfusion and for the quantification of the tumour malignancy grade in breast carcinoma were both accurate. Further, the obtained models for the influence that the positron range in various human tissues, and the photon emission non-collinearity and depth of interaction have on PET image spatial resolution, could be used both to optimise future PET camera designs and spatial resolution recovery algorithms. Finally, it was shown that the proton fluence rate in a proton therapy beam could be monitored and visualised by using a simple and inexpensive CMOS image sensor.
|
Page generated in 0.2102 seconds