京都大学 / 新制・課程博士 / 博士(理学) / 甲第23712号 / 理博第4802号 / 新制||理||1687(附属図書館) / 京都大学大学院理学研究科地球惑星科学専攻 / (主査)教授 竹見 哲也, 准教授 重 尚一, 教授 榎本 剛 / 学位規則第4条第1項該当 / Doctor of Science / Kyoto University / DGAM

A enzima L-Asparaginase (ASNase) é um biofámaco utilizado no tratamento da leucemia linfoblástica aguda, no entanto, a evolução da produção da ASNase como um medicamento desde o final da década de 1970 resultou em apenas quatro alternativas disponíveis no mercado farmacêutico, com relatos de graves reações imunogênicas e toxicidade. Desse modo, a nanotecnologia é uma plataforma que pode ser explorada para administração dessa enzima diminuindo a exposição da mesma a proteases e aumentando a sua meia-vida aparente. Os polimerossomos (PL) são opções que pela nanoestrutura vesicular poderiam encapsular a ASNase em seu core aquoso e pela presença de uma membrana polimérica, são mais robustos que os lipossomos. Assim, neste trabalho objetivou-se desenvolver PL para encapsulação da ASNase como uma alternativa às formulações deste biofármaco existentes. Foram desenvolvidos PL de PEG-PLA, PMPC-PDPA, PEG-PDPA e Pluronic® L-21. Foram estudados fatores relacionados à composição dos copolímeros (fração hidrofílica, responsividade a fatores externos tais como pH e temperatura) e métodos de elaboração (hidratação do filme polimérico, troca de pH e temperatura) bem como foi feita a caracterização dos PL obtidos (tamanho, índice de polidispersão, espessura de membrana, formação de excessivo bulk polimérico, obtenção de micelas). Também foi feito um planejamento racional para encapsulação da ASNase (hidratação direta do filme polimérico e encapsulação por eletroporação, autoagregação com encapsulação por troca de pH ou de temperatura). Para os PL preparados com PEG-PLA, a extrusão resultou em distribuição de tamanhos mais estreitos correspondentes aos valores de PDI de 0,345, 0,144 e 0,081 para PEG45-PLA69, PEG114-PLA153 e PEG114-PLA180, respectivamente. Foi demonstrado que copolímeros com menor fração hidrofóbica resultam em maior eficiência de encapsulação para proteínas, já que possuem volumes aquosos maiores. Com o PMPC25-PDPA72 foi possível encapsular em média três unidades de ASNase por vesículas através da eletroporação ou troca de pH, sendo que no primeiro método houve formação de túbulos e no último método as micelas não foram completamente removidas. Para PEG100-PDPA80, grandes agregados permaneceram após a purificação levando a um PDI alto, mas não foi observada a formação de túbulos, já a troca de pH para este copolímero resultou em maior perda de copolímeros como bulk polimérico precipitado. Para o copolimero tribloco Pluronic® L-121, foi observado que as vesículas eram estáveis durante uma semana à temperatura ambiente, contrariando o que era descrito na literatura. Nesses sistemas, quando preparados por hidratação do filme, a encapsulação da ASNase foi realizada por eletroporação mas a proteína não foi detectada dentro das vesículas. Atribuímos a não-encapsulação à organização da bicamada Pluronic® L-121 sem conformação definida das cadeias poliméricas, dificultando a reorganização do bloco hidrofílico na porção interna do poro durante eletroporação. Por troca de temperatura, cerca de 5 % de ASNase foi encapsulada e o método resultou em total recuperação da atividade da enzima. Desse modo foram obtidos diferentes PL com diferentes características nanoestruturais de acordo com os copolímeros utilizados para carreamento da ASNase. / The enzyme L-Asparaginase (ASNase) is a biopharmaceutical used in the treatment of acute lymphoblastic leukemia, still the industrial production of ASNase as a marketable drug since the late 1970s has resulted in only four alternatives available in the pharmaceutical market, with reports of severe immunogenic reactions and toxicity. In this sense, nanotechnology is a platform that can be exploited to administer this enzyme by decreasing its exposure to proteases and increasing its apparent half-life. Polymerosomes (PL) are interesting routes which by its intrinsically vesicular nanostructure could encapsulate the ASNase in its aqueous core and by the presence of a polymeric membrane, being more robust than the liposomes. Thus, in this work it was intended to develop PL for ASNase encapsulation as an alternative to existing formulations of this biopharmaceutical. PL of PEG-PLA, PMPC-PDPA, PEG-PDPA and Pluronic® L-21 were developed. It was studied the copolymers composition (i.e. hydrophilic fraction, responsiveness to external factors such as pH and temperature), PL design (i.e. polymer film hydration, pH change and temperature) and PL characterization (i.e. size, polydispersity index - PDI, membrane thickness, formation of excessive polymer bulk, micelles production). A suitable experimental planning for ASNase encapsulation (i.e. direct hydration of the polymeric film and encapsulation by electroporation, self-aggregation with encapsulation by pH or temperature change) was also performed. For the PL prepared with PEG-PLA, the extrusion resulted in narrower size distribution corresponding to the PDI values of 0.345, 0.144 and 0.081 for PEG45-PLA69, PEG114-PLA153 and PEG114-PLA180, respectively. It has been shown that copolymers with lower hydrophobic fraction result in higher encapsulation efficiency for proteins, since they have larger aqueous volumes. With PMPC25-PDPA72 PL, it was possible to encapsulate three units of ASNase per vesicles through electroporation or pH change. In the first method, tubules were formed and in the latter one the micelles were not completely removed. For PEO100-PDPA80 PL, large aggregates remained after purification leading to a high PDI value, nevertheless no tubule formation was observed, since the pH change for this copolymer resulted in greater loss of copolymers as a precipitated polymer bulk. For the Pluronic® L-121 triblock copolymer PL, it was observed that the vesicles were stable for one week at room temperature, contrary to what was described in the literature. These PLs were prepared by film hydration method and ASNase encapsulation was performed by electroporation, nonetheless the protein was not detected within the vesicles. It is attributed the non-encapsulation to the organization of the Pluronic® L-121 bilayer without defined conformation of the polymer chains, making it difficult to reorganize the hydrophilic block in the internal portion of the pore during electroporation. By temperature change, about 5% of ASNase was encapsulated and the method resulted in complete recovery of enzyme activity. In conclusion, several PLs with a vast range of differential nanostructural characteristics were obtained according to the copolymers used for ASNase loading.

A enzima L-Asparaginase (ASNase) é um biofámaco utilizado no tratamento da leucemia linfoblástica aguda, no entanto, a evolução da produção da ASNase como um medicamento desde o final da década de 1970 resultou em apenas quatro alternativas disponíveis no mercado farmacêutico, com relatos de graves reações imunogênicas e toxicidade. Desse modo, a nanotecnologia é uma plataforma que pode ser explorada para administração dessa enzima diminuindo a exposição da mesma a proteases e aumentando a sua meia-vida aparente. Os polimerossomos (PL) são opções que pela nanoestrutura vesicular poderiam encapsular a ASNase em seu core aquoso e pela presença de uma membrana polimérica, são mais robustos que os lipossomos. Assim, neste trabalho objetivou-se desenvolver PL para encapsulação da ASNase como uma alternativa às formulações deste biofármaco existentes. Foram desenvolvidos PL de PEG-PLA, PMPC-PDPA, PEG-PDPA e Pluronic® L-21. Foram estudados fatores relacionados à composição dos copolímeros (fração hidrofílica, responsividade a fatores externos tais como pH e temperatura) e métodos de elaboração (hidratação do filme polimérico, troca de pH e temperatura) bem como foi feita a caracterização dos PL obtidos (tamanho, índice de polidispersão, espessura de membrana, formação de excessivo bulk polimérico, obtenção de micelas). Também foi feito um planejamento racional para encapsulação da ASNase (hidratação direta do filme polimérico e encapsulação por eletroporação, autoagregação com encapsulação por troca de pH ou de temperatura). Para os PL preparados com PEG-PLA, a extrusão resultou em distribuição de tamanhos mais estreitos correspondentes aos valores de PDI de 0,345, 0,144 e 0,081 para PEG45-PLA69, PEG114-PLA153 e PEG114-PLA180, respectivamente. Foi demonstrado que copolímeros com menor fração hidrofóbica resultam em maior eficiência de encapsulação para proteínas, já que possuem volumes aquosos maiores. Com o PMPC25-PDPA72 foi possível encapsular em média três unidades de ASNase por vesículas através da eletroporação ou troca de pH, sendo que no primeiro método houve formação de túbulos e no último método as micelas não foram completamente removidas. Para PEG100-PDPA80, grandes agregados permaneceram após a purificação levando a um PDI alto, mas não foi observada a formação de túbulos, já a troca de pH para este copolímero resultou em maior perda de copolímeros como bulk polimérico precipitado. Para o copolimero tribloco Pluronic® L-121, foi observado que as vesículas eram estáveis durante uma semana à temperatura ambiente, contrariando o que era descrito na literatura. Nesses sistemas, quando preparados por hidratação do filme, a encapsulação da ASNase foi realizada por eletroporação mas a proteína não foi detectada dentro das vesículas. Atribuímos a não-encapsulação à organização da bicamada Pluronic® L-121 sem conformação definida das cadeias poliméricas, dificultando a reorganização do bloco hidrofílico na porção interna do poro durante eletroporação. Por troca de temperatura, cerca de 5 % de ASNase foi encapsulada e o método resultou em total recuperação da atividade da enzima. Desse modo foram obtidos diferentes PL com diferentes características nanoestruturais de acordo com os copolímeros utilizados para carreamento da ASNase. / The enzyme L-Asparaginase (ASNase) is a biopharmaceutical used in the treatment of acute lymphoblastic leukemia, still the industrial production of ASNase as a marketable drug since the late 1970s has resulted in only four alternatives available in the pharmaceutical market, with reports of severe immunogenic reactions and toxicity. In this sense, nanotechnology is a platform that can be exploited to administer this enzyme by decreasing its exposure to proteases and increasing its apparent half-life. Polymerosomes (PL) are interesting routes which by its intrinsically vesicular nanostructure could encapsulate the ASNase in its aqueous core and by the presence of a polymeric membrane, being more robust than the liposomes. Thus, in this work it was intended to develop PL for ASNase encapsulation as an alternative to existing formulations of this biopharmaceutical. PL of PEG-PLA, PMPC-PDPA, PEG-PDPA and Pluronic® L-21 were developed. It was studied the copolymers composition (i.e. hydrophilic fraction, responsiveness to external factors such as pH and temperature), PL design (i.e. polymer film hydration, pH change and temperature) and PL characterization (i.e. size, polydispersity index - PDI, membrane thickness, formation of excessive polymer bulk, micelles production). A suitable experimental planning for ASNase encapsulation (i.e. direct hydration of the polymeric film and encapsulation by electroporation, self-aggregation with encapsulation by pH or temperature change) was also performed. For the PL prepared with PEG-PLA, the extrusion resulted in narrower size distribution corresponding to the PDI values of 0.345, 0.144 and 0.081 for PEG45-PLA69, PEG114-PLA153 and PEG114-PLA180, respectively. It has been shown that copolymers with lower hydrophobic fraction result in higher encapsulation efficiency for proteins, since they have larger aqueous volumes. With PMPC25-PDPA72 PL, it was possible to encapsulate three units of ASNase per vesicles through electroporation or pH change. In the first method, tubules were formed and in the latter one the micelles were not completely removed. For PEO100-PDPA80 PL, large aggregates remained after purification leading to a high PDI value, nevertheless no tubule formation was observed, since the pH change for this copolymer resulted in greater loss of copolymers as a precipitated polymer bulk. For the Pluronic® L-121 triblock copolymer PL, it was observed that the vesicles were stable for one week at room temperature, contrary to what was described in the literature. These PLs were prepared by film hydration method and ASNase encapsulation was performed by electroporation, nonetheless the protein was not detected within the vesicles. It is attributed the non-encapsulation to the organization of the Pluronic® L-121 bilayer without defined conformation of the polymer chains, making it difficult to reorganize the hydrophilic block in the internal portion of the pore during electroporation. By temperature change, about 5% of ASNase was encapsulated and the method resulted in complete recovery of enzyme activity. In conclusion, several PLs with a vast range of differential nanostructural characteristics were obtained according to the copolymers used for ASNase loading.

Orientador: Edvaldo Sabadini / Tese (doutorado) - Universidade Estadual de Campinas, Instituto de Quimica / Made available in DSpace on 2018-08-15T19:00:04Z (GMT). No. of bitstreams: 1 Paula_KellyRobertaFranciscoMurucide_D.pdf: 1276318 bytes, checksum: 05828c19cce0cc938017a5675f66d9d2 (MD5) Previous issue date: 2010 / Resumo: É bem conhecido que certas moléculas pequenas se agregam através de interações específicas, formando espontaneamente estruturas poliméricas supramoleculares em solução aquosa e orgânica. A formação destas macroestruturas pode alterar significativamente a viscoelasticidade da solução. Essas estruturas diferem dos polímeros por serem sistemas que estão num processo constante de quebra e recombinação numa escala finita de tempo que é dependente das propriedades físico-químicas dos sistemas. No regime semi-diluído verificamos que a adição de pequenas quantidades de álcool benzílico, benzeno, PVA parcialmente hidrolisado e PPO promovem uma perda nas propriedades viscoelásticas dos sistemas de micelas gigantes formadas por brometo de hexadeciltrimetilamônio e salicilato de sódio (CTAB/NaSal). Em solventes orgânicos, estudamos a auto-estruturação de moléculas 2,4-bis(2-etilexilureido) tolueno (EHUT). A adição de etanol e álcool benzílico aos sistemas de EHUT em octano confere a solução uma maior fluidez, que deve estar associada com a destruição parcial de algumas cadeias do polímero supramolecular, devido às interações específicas (ligações de hidrogênio, no caso do grupo OH dos álcoois e entre anéis aromáticos no caso do álcool benzílico). Apesar da significativa alteração reológica, nenhuma mudança estrutural foi observada através de medidas de SANS e Cryo-TEM para ambos os sistemas (CTAB/NaSal e EHUT). No regime diluído, fundamentados no fenômeno de redução de atrito, foi possível avaliar a estabilidade térmica dos polímeros supramoleculares sob fluxo turbulento. Para os sistemas formados por CTAB/NaSal observamos uma temperatura crítica TC onde não se observa redução no nível de turbulência dos sistemas, a qual está associada com a quebra das micelas gigantes em micelas mais curtas ou esféricas. A adição de álcool benzílico e PVA diminui os valores de TC sugerindo uma forte interação desses solutos com as micelas gigantes, diminuindo a estabilidade térmica das mesmas. Foi demonstrado pela primeira vez que uma estrutura supramolecular é capaz de reduzir o atrito hidrodinâmico em um solvente orgânico. Para os sistemas formados por EHUT em octano ou tolueno, verificamos uma perda na redução de atrito associada com a transição da forma tubo para a forma filamento com o aumento de temperatura. A adição de etanol e álcool benzílico nas soluções de EHUT provoca uma quebra nas estruturas da forma tubo e o fenômeno de redução de atrito não pode mais ser observado / Abstract: It¿s very well known that some small molecules can self-assemble spontaneously by specific interactions, forming supramolecular polymer structures in aqueous and organic phases. The formation of those macromolecules can modify expressively the viscoelasticity of the systems. These structures differ from those of polymers, because they can break and reform within a lifetime that is dependent on the physico-chemical properties of the systems. Aqueous solutions of cetyltrimethylammonium and sodium salicilate (CTAB/NaSal) can form wormlike micelles in semi-dilute regime, and we verified that the addition of minute amounts of benzylic alcohol, benzene, partially hydrolyzed PVA and PPO promote a decrease in the viscoelastic properties of the system. In organic solvents it was studied the self-assembly of bis-urea (EHUT) molecules. The addition of ethanol or benzyl alcohol in EHUT/octane systems confers a high fluidity to solutions, which can be associated to the partial destruction of some chains, due to specific interactions (OH in the case of the alcohols and between the aromatic rings in the case of benzyl alcohol). However, no structural changes were observed to CTAB/NaSal, and to EHUT systems by using SANS and Cryo-TEM techniques (in this case to the aqueous system). In dilute regime, the polymers produce hydrodynamic drag reduction under turbulent flow and based in this property, we evaluate the thermal stability of the supramolecular polymers. Systems formed by CTAB/NaSal have showed a critical temperature TC, associated to the limit in which the drag reduction phenomenon is still observed, and beyond this critical temperature, the wormlike micelles is broken into small or spherical micelles. When benzyl alcohol and PVA are added to systems, the TC values decrease, suggesting a strong interaction between those solutes and the surfactants of the wormlike micelles. This work presents the first demonstration of drag reduction in organic solvent by using a self-assembly system. We studied the thermal stability to EHUT in octane and toluene. The increase in the temperature leads a lost in the capability of EHUT to maintain the drag reduction ability, which is associated with the transition of tube to filamentform. The addition of benzyl alcohol and ethanol into EHUT solutions promote a break of the tube form and the drag reduction phenomenon cannot be observed anymore / Doutorado / Físico-Química / Doutor em Ciências

Abstract There has been great interest in microgels as drug carriers within the pharmaceutical industry. This includes the use of amphiphilic drugs for treating conditions such as depression, allergies, and cancer. By loading adiphenine (ADP), pavatrine (PVT), and diphenhydramine (DPH) into macrogels and observing the release, this study seeks to investigate how amphiphilic drugs can be released from microgels. There is also an interest in how aggregation behavior may vary depending on the structural components. This study utilized small angle x-ray scattering (SAXS) along with UV analysis and the measuring of the binding isotherm to investigate micelle aggregation and aggregation number. Two of the drugs adiphenine and pavatrine, have similar structures with only one bond that differentiated them. The difference in rigidity provided different results in SAXS. Adiphenine has an aggregation number of 12, diphenhydramine has a number of 13, and pavatrine has a number of 37. In contrast to pavatrine, which did not exhibit a correlation peak, adiphenine and diphenhydramine showed correlation peaks. This indicates that none of them had an ordered phase structure but pavatrine displayed an even more disordered phase structure. Nevertheless, all three drugs were in equilibrium, and so a difference between adiphenine and pavatrine could be clearly distinguished. There were significant divergences between pavatrine and adiphenine despite not being able to determine binding isotherms for all three drugs. Based on this, they should be less stable than diphenhydramine. They have an ester linkage, while diphenhydramine doesn't. As a result, it was not possible to confirm how self-aggregation of adiphenine, pavatrine, and diphenhydramine impacts drug release. Despite this, differences in the rigidity of the structural form may lead amphiphilic drugs to exhibit different behaviour in gels. Keywords: Amphiphilic drugs, small angle x-ray scattering, macrogels, binding isotherm, CMC, self-aggregation, phase structure, micelles.

Controlling conformation of macromolecules, both in solution and solid state, has remained an exciting challenge till date as it confronts the entropy driven random coil conformation. Folded forms of biomacromolecules, like proteins and nucleic acids, have served as role-models to the scientists in terms of designing synthetic foldamers. The folded functional forms of proteins and nucleic acids have been shown to rely heavily on various factors, like directional hydrogen bonding, intrinsic conformational preferences of the backbone, solvation (e.g. hydrophobic effects), coulombic interactions, charge-transfer interactions, metal-ion complexation, etc. Chapter-1 discusses various designs of synthetic polymers explored by research groups world-over to emulate the exquisite conformational control exercised by biomacromolecular systems. Our laboratory has been extensively involved since 2004 in designing charge-transfer complexation induced folding of flexible donor-acceptor (DA) polymeric systems, such as those shown in Scheme 1. It was observed that such polymers adopt a folded conformation in polar solvents, like methanol, in the presence of an excess of an appropriate alkali metal ion. To explore folding in the solid state, Jonas and co-workers recently showed that a polyethylene-like polyester with long alkylene segments containing periodically located pendant propyl group forms a semicrystalline morphology with alternating crystalline and amorphous regions primarily because of the periodic folding of the backbone due to the steric exclusion of the propyl branches from the crystalline domains. In order to explore immiscibility-driven folding of polyethylene-like polyesters, Roy et al. designed a periodically grafted amphiphilic copolymer (PGAC) containing long alkylene segments (mimicking polyethylene) and pendant oligoethyleneglycol chains at periodic intervals (Scheme 2). Scheme 2: Proposed folding of a periodically grafted amphiphilic copolymer It was demonstrated that immiscibility between the hydrocarbon backbone and pendant PEG segments drives the polymer to adopt a folded zigzag conformation as shown in Scheme 2. The above synthetic strategy, however, does not permit easy structural variation of the side chain segments because the side-chain segment is covalently linked to the malonate monomer. In Chapter-2, a more general strategy to prepare periodically grafted copolymers has been described. In an effort to do so, we designed a series of clickable polyesters carrying propargyl/allyl functionality at regular intervals along the polymer backbone, as shown in Scheme 3. Scheme 3: Periodically clickable polyesters for the preparation of periodically grafted copolymers The polyesters were prepared by reacting either 2-propargyl-1,3-propanediol, 2,2-dipropargyl-1,3-propanediol or 2-allyl-2-propargyl-1,3-propanediol with an alkylene diacid chloride, namely 1,20-eicosanedioic acid chloride, under solution polycondensation conditions. Since these polyesters carry either, one propargyl, two propargyls or one propargyl and one allyl group on every repeat unit, it provides us an opportunity to synthesise exact graft copolymers with one side chain, two side chains or even two dissimilar side chains per repeat unit. In Chapter-3, the periodically clickable polyesters were reacted with MPEG-350 (PEG 350 monomethyl ether) azides using Cu(I) catalyzed azide-yne click reaction to generate periodically grafted amphiphilic copolymers (PGAC) carrying crystallizable hydrophobic backbone and pendant hydrophilic MPEG-350 side-chains (Scheme 4). Since the PGACs carry either one or two pendant MPEG-350 chains on every repeat unit, it allowed us to examine the effect of steric crowding on the crystallization propensity of the central alkylene segment. Scheme 4: Functionalization of periodically clickable polyesters with MPEG 350 azide by azide-yne click reaction From DSC studies, it was observed that increase in steric crowding at junctions resulting from increased side-chain volume hinders effective packing of the hydrocarbon backbone. As a result, both transition temperatures and the enthalpies associated with these transitions decreases. SAXS and AFM studies revealed the formation of lamellar morphology with alternate domains of PEG and hydrocarbon. Based on these observations, we proposed that self-segregation between hydrophobic backbone and hydrophilic side-chains induce the backbone to adopt a folded zigzag conformation (Scheme 5). Scheme 5: Schematic depiction of self-segregation induced folding of PGAC and their assembly on mica surface (AFM image) In order to study the effect of solvent polarity on conformational evolution of the periodically grafted amphiphilic copolymers, we randomly incorporated pyrene in the backbone of the polymer by reacting a small fraction (~ 5 mole %) of the propargyl groups with pyrene azide. Fluorescence study of the pyrene labelled polymer showed that increase in solvent polarity increases the intensity of the excimer band dramatically; this suggests the possible collapse of the polymer chain to the folded zigzag form. In an extension of this work, the PGAC was further used as template to synthesise layered silicates that appears to replicate the lamellar periodicity seen in the polymer. In order to study the effect of reversing the amphiphilicity on self-segregation, in Chapter-4, we synthesised a series of clickable polyesters carrying PEG segments of varying lengths, namely PEG 300, PEG 600 and PEG 1000, along the polymer backbone. The polymers were prepared by trans-esterification of 2-propargyl dihexylmalonate with different PEG-diols. These polyesters were then clicked with docosyl (C22) azide using Cu(I) catalyzed azide-yne click reaction to generate the desired periodically grafted amphiphilic polymers carrying crystallizable hydrophobic pendant chains at periodic intervals; the periodicity in this case was governed by the length of the PEG diols (Scheme 6). Scheme 6: PGACs carrying hydrophilic PEG backbone and crystallizable hydrophobic pendant docosyl chains Varying the average periodicity of grafting provided an opportunity to examine its consequences on the self-segregation behavior. Given the strong tendency of the pendant docosyl segments to crystallize, DSC studies proved useful to analyse the self-segregation; DOCOPEG 300 clearly exhibited the most effective self-segregation, whereas both DOCOPEG 600 and DOCOPEG 1000 showed weaker segregation. Based on the observations from DSC studies, we proposed that the PEG backbone adopts a hairpin like conformation (Scheme 7). Scheme 7: Proposed self-segregation through hairpin like conformation of backbone PEG segments In order to confirm the bulk morphology, we carried out small angle X-ray scattering (SAXS) and atomic force microscopic (AFM) studies. The SAXS profiles confirmed the observations from DSC studies, and only DOCOPEG 300 exhibited well-defined lamellar ordering. Thus, it is clear that the length of the backbone PEG segment (volume-fraction) strongly influences the morphology of the PGACs. Based on the inter-lamellar spacing from SAXS and the height measurements from AFM studies (Scheme 8), we proposed that these polymers form lamellar morphology through inter-digitation of the pendant docosyl side-chains. The observations from Chapters 3 and 4 suggested that the crystallization of the backbone has a dramatic effect on the conformation of the polymer backbone. In order to explore the possibility of independent crystallization of both backbone and pendant side-chains, the periodically clickable polyesters, described in Chapter-2, were quantitatively reacted with a fluoroalkyl azide, namely CF3(CF2)7CH2CH2N3 using Cu(I) catalyzed azide-yne click reaction; Chapter-5 describes these polyesters carrying long chain alkylene segments along the backbone and either one or two perfluoroalkyl segments located at periodic intervals along the polymer chain (Scheme 9). DSC thermograms of two of the samples showed two distinct endotherms associated with the melting of the individual domains, while the WAXS patterns confirm the existence of two separate peaks corresponding to the inter-chain distances within the crystalline lattices of the hydrocarbon (HC) and fluorocarbon (FC) domains; this confirmed the occurrence of independent crystallization of both the backbone and side chains. Scheme 10: Left-variation of SAXS profile of all three polymers as a function of temperature, Right- molecular modelling of representative FC-HC-FC triblock structures. Interestingly, a smectic-type liquid crystalline phase was observed at temperatures between the two melting transitions. SAXS data, on the other hand, revealed the formation of an extended lamellar morphology with alternating domains of HC and FC (Scheme 10). The inter-lamellar spacing calculated from SAXS matches reasonably well with those estimated from TEM images. Based on these observations, we proposed that the FC modified polymers adopt a folded zigzag conformation whereby the backbone alkylene (HC) segment becomes colocated at the center and is flanked by the perfluoroalkyl (FC) groups on either side, as depicted in Scheme 11. Melting of alternate HC domains first leads to the formation of a smectic-type liquid crystalline mesophase, wherein the crystalline FC domains retain the smectic ordering; this was confirmed by polarizing light microscopic observations. Scheme 11: Schematic presentation of self-segregation induced folding of polymer chains; and hence crystallization assisted assembly of these singly folded chains to form lamellar structure One interesting challenge would be to create unsymmetrical folded structures, wherein the top and bottom segments of the zigzag folded form would be occupied by two different segments, such as PEG and FC, whereas the backbone alkylene segment would form the central domain; this would lead to the possible formation of consecutive domains of PEG, HC and FC through immiscibility driven self-segregation process. In Chapter-6, several approaches to access such systems have been described; one such design that could have resulted in the successful synthesis of a periodically clickable polymer carrying orthogonally clickable propargyl and allyl groups along the backbone in an alternating fashion is depicted in (Scheme 12). The parent polyester was successfully synthesized and the propargyl group was first clicked with the FC-azide to yield the FC-clicked polyester; however, several attempts to click MPEG-SH onto the allyl groups using thiol-ene click reaction failed. Scheme 12: Scheme for the synthesis of alternating orthogonally clickable polymer In order to accomplish our final objective, we chose to first prepare the FC-clicked diacid chloride and polymerize it with an azide-alkyne clickable macro-diol, as depicted in Scheme 13; this approach was successful and yielded the desired clickable polyester bearing the FC segments at every alternate location. This polymer was then clicked with PEG-750 azide to yield the final targeted polymer that carries mutually immiscible FC and PEG-750 segments at alternating positions along the polymer backbone. The occurrence of self-segregation of FC, PEG-750 and the alkylene backbone (HC) was first examined by DSC studies, which appeared to suggest the presence of three peaks, although these were not very well-resolved. Scheme 13: Schematic for the synthesis of the polymer carrying FC and PEG 750 alternatingly along the backbone A schematic depiction of the anticipated organization of such unsymmetric folded macromolecules is shown in Scheme 15; it is evident that because of mutual immiscibility, the layers will be organized such that the FC domains of adjacent layers will be together and similarly the PEG domains of adjacent layers will also be together. Such an organization would lead to an estimated spacing that would correspond to a bilayer of the folded structures. Interestingly, SAXS study (Scheme 14) reveals the formation of lamellar morphology with a d-spacing of 14.6 nm. Scheme 14: Figure 6.10: SAXS profile of the polymer PE-FC-PEG 750 In order to gain an estimate of the expected inter-lamellar spacing, the end-to-end distance of a model repeat-unit was computed to be ~ 9.4 nm. It is, therefore, evident that the inter-lamellar spacing of 14.6 nm seen in the SAXS is significantly larger and must represent a bilayer type organization (Scheme 15). In this regard it is important to say that the organization of these alternatingly functionalized folded chains should give a variety of d-spacings. Because of highest electron density contrast of FC among PEG, HC and FC, we proposed that the d-spacing calculated from the SAXS profile corresponds to ‘d4’ in Scheme 15. This first demonstration of the formation of zigzag folded unsymmetric entities bearing dissimilar segments on either side of the folded chain holds exciting potential for a variety of different applications and beckons further investigations. Scheme 15: Schematic for the proposed self-assembly of the singly folded polymer chains

Bien que connu en tant que pathogène bactérien porcin majeur et agent zoonotique responsable principalement de méningites, septicémies et de morts soudaines, Streptococcus suis a également été isolé chez une variété d’autres animaux tels que les ruminants. Malgré sa diversité génotypique et sérologique, des études taxonomiques récentes ont mené à la reclassification de 6 de ses sérotypes dont le sérotype 33, maintenant dénommé comme nouvelle espèce Streptococcus ruminantium. Contrairement à S. suis, S. ruminantium a principalement été décrit chez les ruminants comme pathogène responsable de diverses manifestations cliniques telles que des endocardites et des arthrites. En raison de sa description récente, plusieurs lacunes concernant ses caractéristiques biologiques et pathologiques demeurent. De plus, S. suis et S. ruminantium sont très difficiles à différencier l’un de l’autre par l’entremise des tests biochimiques traditionnellement utilisés dans les laboratoires de diagnostic. Ainsi, plusieurs souches de S. suisisolées de ruminants malades avant la mise à jour de la classification, s’avèrent mal identifiées. D’où la raison pour laquelle l’importance étiologique de S. ruminantium chez les ruminants reste incertaine. Pour y remédier, 14 isolats de S. suis provenant d’échantillons cliniques chez des ruminants au Canada, ont été reclassifiés en S. ruminantium selon les nouvelles analyses génétiques moléculaires décrites. À ces derniers s’ajoutent 7 isolats de S. ruminantium provenant de cas d’endocardites bovines au Japon, qui ont été également davantage caractérisés génotypiquement et phénotypiquement et leurs interactions avec différentes cellules de l’hôte ont été évaluées. En résumé, on a pu démontrer que tous les isolats étaient faiblement voire non encapsulés avec une surface cellulaire hydrophobe, ils avaient une grande capacité d’auto-agrégation et une habileté à produire du biofilm. Ces phénotypes pourraient contribuer à la pathogénèse de l’infection en intensifiant la capacité d’adhésion et d’invasion des cellules épithéliales et endothéliales et en augmentant la résistance à l’effet bactéricide du sang entier et à la phagocytose par les cellules immunitaires de l’hôte. Cependant, certains isolats étaient plus susceptibles que d’autres à la phagocytose, suggérant que d’autres mécanismes de protection seraient impliqués dans cette étape. Ainsi, cette étude aide à améliorer notre connaissance sur la pathogénicité et la virulence de S. ruminantium pour les maladies chez les ruminants. / Although Streptococcus suis is known as a major swine bacterial pathogen and zoonotic agent mainly responsible for meningitis, septicemia, and sudden death, it has also been isolated from a variety of other animals including ruminants. Despite its genotypical and serological diversity, recent taxonomic studies led to the reclassification of 6 S. suis serotypes such as S. suis serotype 33 currently renamed as the novel species Streptococcus ruminantium. Unlike S. suis, S. ruminantium has been mainly described in ruminants as a cause of endocarditis and arthritis. Because of its recent description, information on its biological and pathological characteristics remains unclear. Moreover, S. suis and S. ruminantium are not easily differentiated by traditional biochemical tests done in diagnostic laboratories. Hence, some S. suis isolates recovered from diseased ruminants before the updated classification, have been misidentified. Consequently, the aetiological importance of S. ruminantium in ruminants remains unknown. To address this,14 S. suis isolates from clinical samples of ruminants in Canada have been reclassified, based on the new genetic molecular testing described for the identification of S. ruminantium. In addition of them, 7 S. ruminantium isolates from bovine endocarditis in Japan, were further genotypically and phenotypically characterized and their interactions with various host cells were studied. Overall, we demonstrated that all isolates were poorly or non-capsulated with a high cell surface hydrophobicity, had a high capacity of self-aggregation and the ability to produce biofilm. These biological phenotypes might contribute to the pathogenesis of the infection by enhancing the adhesion/invasion capacity of both epithelial and endothelial cells, and by increasing the resistance to whole blood killing and phagocytosis by host immune cells. However, some isolates were more susceptible to the phagocytosis than others suggesting that other protective mechanisms might be implicated in this step. Taken together, this study will help to increase our understanding of the pathogenicity and the virulence of S. ruminantium in ruminant diseases.