Variation of dissolved of organic carbon concentration in stream water is a consequence of process changes in the surrounding terrestrial environment. This study will focus on 1) Identify significant environmental factors controlling the spatial and temporal variation of DOC in terrestrial ecosystems of a watershed southeast of Boston, Massachusetts; 2) Model the DOC leaching from different land cover and examine the relationship between leaching flux and in-stream DOC. Our hypothesis is variations of in stream DOC is closely related to watershed properties and environmental factors at annual, seasonal, and daily scales, especially land cover type, watershed size and hydrology. To explore the relationship of hydrology and DOC variation at ungauged sub-basin, we examined the effectiveness of using simulated stream flow from Soil Water Assessment Tool (SWAT) to study terrestrial DOC dynamics. Our results demonstrated that streamflow, drainage area, and percent of wetland and forest were particularly strong predictors in watersheds with a large proportion of developed area. The resulting linear model is able to explain about 70.2% (R2=0.702) and 65.1% (R2=0.651) of the variance of in-stream DOC concentrations at seasonal and annual scales respectively. Results also suggest that more frequent DOC sampling is necessary to establish the quantitative relationship between simulated stream flows from the SWAT and in-stream DOC concentrations at daily scale. The physically based ecosystem model developed in this study shows that DOC leaching from various land cover are highly correlated (up to 80%) with in-stream DOC by using ecological process with incorporated different hydrological pathways. It shows that leaching of DOC from soil is a significant contributor to the in-stream DOC. The production of DOC is largely controlled by the vegetation type and soil texture. Considering the hydrologic control on DOC transport with different pathways of water at finer spatial and temporal scale highlights the need to identify the quantitative relationships between water and carbon flux.

Farmers have been disrupting the carbon cycle ever since humans started converting forests to agricultural lands. But are there farming practices that can be applied to increase the carbon storage in the soil and subsequently counteract increasing carbon dioxide levels in the atmosphere? In this study I investigate if soil organic matter (SOM) and soil organic carbon (SOC) change with longer interruption between tillage events. The study was conducted by studying SOM concentrations and SOC pools in eight fields with different time since tillage (1 to 14 years). I found that SOM concentrations increased in the O horizon of the studied soil in response to increased time since tillage. Here, SOM concentrations were on average around 13 % one year after tillage, while fourteen-year-old farmland had a concentration around 15 %. In similar, SOC pool increased from around 0.1 kg C m-2 in the O horizon of 1 year old soil to 0.33 kg C m-2 14 years after tillage. While both SOM concentrations and SOC pools increased in the O horizon over time since tillage, the SOM concentration and SOC pools decreased in the subsoil. I found no net sequestering of SOC in response to less frequent tillage in comparison to more frequency tillage. My conclusion is that limiting tillage to 14-year cycles is not enough to increase carbon sequestration.

The prevailing conditions in metalliferous soils are usually hostile for plant growth, but some plant species are still able to thrive in these substrates. Festuca arundinacea Schreb. plants were found to thrive on serpentine soils containing high concentrations of Cr and Ni. These plants contained higher concentrations of Ni in their roots than in their shoots. Hydroponic growth experiments with 350 µM and 650 µM Ni singularly and in combination revealed that more Cr was accumulated at the roots. The opposite was the case for Ni. The same experiments showed no difference between plants from serpentine and control soils in terms of growth and metal uptake. Ni was found to be toxic to control Festuca arundinacea plants at concentrations of at least 50 µM. The uptake of Ni in Festuca arundinacea was increased by an increase in the concentration of Ni and a decrease the pH of the substrate.

The soil bacterium Rhodococcus has a wide array of secondary metabolic pathways such as production of pigments, siderophores, and antibiotics that makes it an organism of interest for the production of novel natural products. Analysis of the genome sequence of Rhodococcus indicates the presence of 24 non-ribosomal peptide synthases and 7 polyketide synthases possibly involved in production of secondary metabolites. The use of a solid agar extraction method to screen soil isolates of Rhodococcus for compounds with inhibitory activity against other bacteria resulted in the discovery of a promising candidate molecule. The Rhodococcus strain KCHXC3, isolated from eastern Tennessee soil, produces a substance that inhibits the growth of several Gram-negative bacteria such as Escherichia coli, Pseudomonas aeruginosa, and Klebsiella pneumonia and Gram-positive bacteria such as Micrococcus luteus and, Staphylococcus aureus. After bulk extraction of this compound with ethyl acetate from agar plates, the material was partially purified through different chromatography processes.

Chapter 1 of this study explores research that has shown that the use of technology in the classroom can be beneficial to student learning. Additionally, a need for Environmental Site Assessment (ESA) instruction in university level core environmental science classrooms has been demonstrated. This study includes an investigation of the potential benefits of using a combination of pedagogies: web-based teaching tools and ESA instruction in a laboratory classroom. The research design included two class formats, one that employed web-based tools (PowerPoint and video) and ESA instruction, and one that did not, with four class sections. All classes were taught by the same instructor and teaching assistant. Weekly quizzes, labs, a final exam, informal interviews and a student survey were used to measure effectiveness of the teaching tools. Significant improvement was exhibited on application questions featured on the final exam with the experimental group scoring higher on 6 of the 15 questions. Additionally, students' preparation and enthusiasm was improved among the experimental groups. Student ratings and performance for the two different formats were similar. Success in the class may depend on the students' preparation and personal desire to succeed. In conclusion, these results suggest that a combination of pedagogies that employs web-based tools and ESA instruction in the laboratory classroom may improve student's preparation for class activities and acquisition of career skills, as well as their enjoyment and enthusiasm to participate in class activities. Chapter 2 represents a sample of the required application activity from the soil science class. It includes the background, test results, procedures, conclusions and recommendations for an Environmental Site Assessment (ESA). ESA instruction is arguably an important addition to soil science curriculum and as such is demonstrated here as an example of the skills displayed and information applied by students who are instructed in writing ESAs.

Strawberries are considered an important crop in California where in 2018 it was in the top 5 valued fruit and vegetable commodities valued at $2.84 billion accounting for 88% of the total U.S. production. Strawberry production can be severely impacted by soilborne pathogens that can affect strawberry roots, crowns and leaves which can result in plant mortality. As much as 50 to 60% mortality can occur in one field. Pathogens responsible for such losses include Colletotrichum acutatum (syn.C. nymphaeae), Macrophomina phaseolina and Verticillium dahliae. With the phaseout of methyl bromide, host resistance and an understanding of host-pathogen interactions can play an important role in control of these diseases. A two-year study was conducted in order to evaluate host resistance of anthracnose in 105 cultivars and elite breeding lines developed by six strawberry breeding programs. Cultivars and elite breeding lines were inoculated using three local isolates in both years. All breeding programs provided genotypes that had a wide range of anthracnose susceptibility ranging from 0 to 100% mortality during both years. In both years an average of 78% of all the plant mortality occurred by 1 January. From the 105 cultivars and elite breeding lines, 30 cultivars were common to both years. Of these 30 cultivars, nine of them differed in their disease susceptibility between experiments by more than 20%. This suggests that several years of field evaluation may be necessary to determine susceptibility to anthracnose. Popular cultivars that represent the spectrum of susceptibility are Monterey (susceptible), Festival (moderately resistant), and Sensation (resistant). A second study was conducted toevaluate pathogen colonization of resistant and susceptible strawberry cultivars, testing interactions among crown and root plant tissue and two sampling timings. These cultivars were challenged with two soilborne pathogens, Macrophomina phaseolinaand Verticillium dahliae,over two years. Existing qPCR protocols for M. phaseolina and V. dahliae were used in order to quantify how much pathogen DNA was detected in crown and root samples. For the 2016-2017 V. dahliae trial there were significant effects for cultivar. Cultivar Benicia had significantly higher pathogen DNA compared to resistant cultivars Marquis, UC-12 and Camino Real. Susceptible cultivar BG 1975 had significantly less pathogen DNA compared to resistant cultivars San Andreas and Petaluma. In the 2017-2018 V. dahliaetrial pathogen DNA amount was not significantly different based on cultivar, plant part colonization, or the sampling period. In the 2017-2018 M. phaseolina trial all three of the fixed factors, cultivars, plant part colonization and sampling period were statistically significant. Cultivar ‘Sweet Ann’ had a significantly higher level of M. phaseolinaDNA in the early vs. the late sampling.

Microbial-root associations are important to help plants cope with abiotic and biotic stressors. Managing these interactions offers an opportunity for improving the efficiency and sustainability of agricultural production. By characterizing the bacterial and archaeal community (via 16S rRNA sequencing) associated with the bulk and rhizosphere soil of sixteen strawberry cultivars in two controlled field studies, we explored the relationships between the soil microbiome and plant resistance to two soilborne fungal pathogens of strawberry (Verticillium dahliae and Macrophomina phaseolina). Overall, the plants had a distinctive rhizosphere microbiome relative to the bulk soil, with higher abundances of known beneficial bacteria such as Pseudomonads and Rhizobium. Plant genotype, biomass, leaf nutrient content and mortality were influenced differently by the rhizosphere microbiome in each of the two trials. In the V. dahliae trial, the rhizosphere microbiome was associated with plant biomass and leaf nutrient content and only indirectly to the disease resistance. In the M. phaseolina trial, the rhizosphere microbiome was associated to plant biomass, but not nutrient content; furthermore, resistant cultivars had larger abundances of Pseudomonas and Arthrobacter in their rhizosphere relative to susceptible cultivars. The mechanisms involved in these beneficial plant-microbial interactions and their plasticity in different environments should be studied further for the design of low-input disease management strategies.

ABSTRACT EFFECTS OF RECYCLED WATER ON LANDSCAPE PLANTS Casey Ray Miranda Recycled water is water that has been previously used, has suffered a loss of quality, and has been properly treated for redistribution (Wu et al. 2001). The use of recycled water as an alternative to fresh water in the landscape can have positive and negative effects. Experimentation on 40 different plant species during a 32 week period (2 phases of 16 weeks), was conducted to analyze the effects of recycled water irrigation on the appearance of landscape plants. Each species of plant was planted into 10 individual number 2 pots and irrigated with recycled water daily. Media and water were tested for nutrients and other constituents. In phase I there were four different species of grasses and grass-like plants, five different perennials, five species of shrubs, and four annuals tested; while phase II tested four species of herbaceous perennials, eight different species of shrubs, six species of groundcovers, and four species of annuals. All tests were conducted at the Paso Robles Waste Water Treatment Plant. Of the grasses and grass like species Yucca spp. and Buchloe spp. performed best. Osteospermum fruticosum, Lavandula angustifolia, Rosmarinus officinalis, Phormium tenax, and Pennisetum setaceum had the best appearance of the herbaceous perennials tested. For the shrubs, Coprosma repens, Cistus purpureus, Dodonea viscosa, Eleagnus pungens, Baccharis pilularis, Ceanothus thysiflorus, Thuja orientalis, and Nerium oleander had the best appearance when irrigated with recycled water. The best annuals were Senecio cineraria, Antirrhinum majus, Primula spp., Viola spp., and Calendula officinalis. Of the groundcovers Heuchera spp., Lonicera japonica, Vinca major, Hedera helix, and Ceanothus griseus had the best results. From the experiment a list of tolerant and non-tolerant plants was compiled (Appendices 1 and 2). While many plants were capable of developing and growing normally, other plants were sensitive to recycled water irrigation. In order to prevent salt damage to plants and expand the use of recycled water, salt tolerance of landscape plant material must be identified (Niu et.al, 2006).

No description available.

No description available.