M.Sc. / Lewis acids play an important role in catalysis; they are associated with mild conditions, high selectivities and unique reactivities. Traditional Lewis acids such as AlCb and BF3 successfully catalyse such well known reactions as the Friedel-Crafts acylation reaction, Aldol condensation reactions and many more. These catalysts, however, must be used in a stoichiometric amount and are destroyed during the aqueous workup procedures. Lately, there has been a lot of interest in the role of metal triflate as Lewis acid catalysts. They were found to be effective in a wide range of reactions when used in catalytic amounts. They were also found to be recyclable and reusable without the loss of activity. Most of this research has been centred around the lanthanide triflates as well as scandium, bismuth and yttrium triflates. Very little research has been done using aluminium triflate and this triflate forms the focus ofthis study. The work contained in this dissertation demonstrates that Al(OTf)3 is an efficient catalyst for the ring opening of a variety of epoxides by alcohols when present in only ppm amounts. These reactions provided products in very high yields and selectivities. Simple acyclic and cyclic epoxides readily underwent ring opening reactions with a range of alcohols, typically providing the monoglycol ethers as single compounds (from the cyclic epoxides) or as mixtures of the two possible glycol monoethers (from the acyclic epoxides). In the case of styrene oxide, essentially a single compound was isolated. In contrast, the glycidyl ethers required slightly higher catalyst loadings before similar rates and conversions to product were observed. Additionally, an interesting selectivity was observed in the orientation of the attack of the alcohol onto the epoxide, which appeared to be chelation controlled. Similarly, the Al(OTf)3 also catalysed the aminolysis of a variety of epoxides. These reactions proceeded smoothly with catalytic amounts of the triflate present, and served to nicely highlight the role that steric and electronic factors played in these reactions. A preliminary study was carried out into the efficacy of Al(OTf)3 as a catalyst for Friedel-Crafts acylation and aromatic nitration reactions. From these studies it is evident that the Al(OTf)3 is indeed an effective catalyst for these reactions when present in substoichiometric levels and further studies will be carried out in this area in the future.

No description available.

The possibility of inducing intramolecular SRN! reactions in two 2-(o-halobenzyl)- amides, 2-(o-iodobenzyl)-N,N,N’N’-tetramethylsuccinamide (77) and 2-(o-iodobenzyl)- N,N,N’N’-tetramethylglutaramide (80), and three 3-(o-halobenzyl)imides, 3-(oiodobenzyl)succinimide (99), 3-(α-cyano-o-bromobenzyl)succinimide (82) and 3-(oiodobenzyl)glutarimide (108), was investigated. All of these substrates were prepared during the course of the investigation. Treatment of 77 and 80 with excess potassium amide in liquid ammonia under photostimulated conditions afforded reasonably good yields of the expected cyclized products, 1,2-bis-(N,N-dimethylcarboxamido)indane (78) and 1,3-bis-(N,N-dimethylcarboxamido)-1,2,3,4-tetrahydronaphthalene (81), respectively. When imide 99 was subjected to similar conditions, it also underwent the expected cyclization, affording succinimido[3,4-b]indane (61) in acceptable yield. Mechanistic investigations revealed that all of the above reactions appear to occur via intramolecular S_RN1 processes. Attempts to induce similar cyclization reactions with 3-(α-cyano-o-bromobenzyl)- succinimide (82) and 3-(o-iodobenzyl)glutarimide (108) proved unsatisfactory. Substrate 82 failed to undergo cyclization to give the desired succinimido[3,4-b]indane-8-carbonitrile (83). Instead, 3-(α-cyano-α-phenylmethyleno)succinimide (107) was formed as the sole isolable product, presumably via an intramolecular β-hydrogen atom abstraction process. 3-(o-Iodobenzyl)glutarimide (108) did not undergo the desired cyclization to give 1,2,3,4,5,6-hexahydro- 1,5-methano-3-benzazocine-2,4-dione (62) either, presumably because of steric hindrance. This study was undertaken with the objective of investigating the possibility of inducing intramolecular S_RN1 reactions in appropriately substituted amide and imide derivatives. The specific substrates, 77, 80, 82, 99 and 108, were selected for the study because it appeared that intramolecular S_RN1 reactions with these substrates would result in the formation of products that might be useful in the development of new anticonvulsant agents. In this context, the preparation of succinimido[3,4-b]indane (61), which seemed likely to possess antiepileptic properties, fulfilled our proposed objective of applying novel chemistry to the preparation of a new potential anticonvulsant agent. The successful cyclization of 77 and 80 into the expected products, 1,2-bis-(N,Ndimethylcarboxamido)indane (78) and 1,3-bis-(N,N-dimethylcarboxamido)-1,2,3,4- tetrahydronaphthalene (81), respectively, also represented the application of novel chemistry to the formation of two other benzo-fused systems. The synthetic and mechanistic investigations undertaken during this study are expected to extend the scope of the synthetic utility of intramolecular S_RN1 chemistry. / Ph. D.

Halogenated heterocycles are common in pharmaceutical and natural products and there is a need to develop a better understanding of processes used to synthesize them. Although the halogenation of simple aromatic molecules is well understood, the mechanisms behind the halogenation of aromatic heterocycles have been more problematic to elucidate because multiple pathways are possible. Recently, new, radical-based mechanisms have been proposed for heterocycle halogenation. In this study, we examine and test the viability of possible nucleophilic substitution, SN2@X, mechanisms in the halogenation of anions derived from the deprotonation of aromatic heterocycles. All the experiments were done in a modified Thermo LCQ Plus equipped with ESI. The modifications allow a neutral reagent to be added to the helium buffer gas in the 3D ion trap. In this system, it is possible to monitor ion/molecule reactions over time periods up to 10 seconds. A variety of aromatic heterocyclic nucleophiles were chosen based on their inclusion of nitrogen and or sulfur as the heteroatoms. In addition to this, the halogenating molecules chosen included traditional halobenzenes and a new class of perfluorinated alkyl iodides. It was found that, experimentally, the SN2@X path is the likely mechanism in the halogenation of deprotonated heterocycles. With computational modeling, we have additional support for this substitution mechanism. From this original study, two more studies were developed to look at the competing nucleophilic aromatic substitution reaction, SNAr. In the first of these studies, the focus was to look at how electron withdrawing substituents about an aromatic ring affect the ratio of SN2@X verses SNAr. As nucleophiles, 2-thiophenide and 5-thiazolide were used. The neutral reagents focus on trifluorobromobenzene derivatives along with pentafluorobromo- and -iodobenzene, and a two trifluoroiodobenzenes. What was found was that the ratio of the reactions depends on where the fluorines, or electron withdrawing substituents are in relation to the bromine or iodine on the ring. If the fluorines are in a close location to stabilize the resulting ionic product, SN2@X proceeds easily. However, the fluorines directly adjacent to the bromine or iodine also provide steric hinderance in the SNAr reaction. In the final project, arylation and benzylation of bromopyridines was examined. The nucleophiles used were benzyl and phenyl anions as well as 5-thiazolide, and the neutral reagents were bromopyridines, with fluorines used as an electron withdrawing groups to help stabilize the transition state. In these experiments, steric hinderance highly affected the results between the phenyl and benzyl nucleophiles. With benzylic anions, the nucleophile is able to reach the aromatic ring with less steric interference and therefore can proceed with an SNAr reaction. In addition to this, with mono and difluorinated pyridine substrates, the nitrogen in the ring activated the ring yielding nucleophilic aromatic substitution losing fluoride rather than bromide in many cases.

Nucleophilic additions are an important class of reactions in the preparation of several organic compounds. Metals facilitate nucleophilic additions in many cases. The present work Mechanistic Investigation of Metal Promoted Nucleophilic additions is an attempt to understand the mechanism of nucleophilic additions to imines and carbonyl compounds mediated by the transition metal complexes. Understanding the mechanism of metal promoted nucleophilic additions can facilitate the design and synthesis of more efficient catalysts. Chapter 1 provides a brief introduction to nucleophilic addition. A few named reactions that involve nucleophilic addition are described. An overview of the metal promoted nucleophilic addition reactions and their mechanisms are presented. A short note on the importance of understanding the mechanism of metal promoted nucleophilic addition is included. This section ends with the scope of the present work. Chapter 2 “Mechanistic Investigation of Titanium Mediated Reactions of Imines” deals with two reactions. The first reaction is the formation of reduced amines on reduction of imines. Amines and diamines are synthesized often from imines. A convenient route to such nitrogen containing compounds is through reduction of imines and through reductive coupling of imines respectively. Since both reactions occur in a parallel fashion, during the synthesis of diamines, amines are obtained as side products and vice versa. This problem is acute in the case of titanium based reducing agents. These reducing agents are called low valent titanium reagents because low valent titanium species are generated in situ either from titanium(IV) or titanium(III) reagents. There is no clear understanding of the nature of the low valent titanium involved in the reaction. To rectify this, a mechanistic understanding of this reaction is essential. An attempt was made to probe the mechanism of formation of amines using low valent titanium formed by using two different reducing agents namely phenylsilane and zinc. With the help of isotopic labelling studies, it was found that the mechanism of formation of an amine with phenylsilane involves a direct hydrogen transfer from phenylsilane to an imine. This was verified using deuterium labelled phenylsilane. With zinc, it follows a traditional titanacycle pathway which was verified by quenching with the deuterium oxide. A second reaction that has been probed is the alkylation of imines by Grignard reagents using chiral titanium complexes. Alkylation of imines is one of the suitable routes to prepare chiral amines. Alkylation of imines employing a Grignard reagent with Ti(OiPr)4 can proceed through two different pathways depending on the amount of the Grignard reagent used. Alkylation reaction with one equivalent of Grignard reagent can proceed through a Ti(IV) species and the alkylation reaction with two equivalents of the Grignard reagent can proceed through a Ti(II) species. The reaction proceeding through Ti(IV) is less wasteful as it only requires one equivalent of the Grignard reagent. The two pathways differ from each other in the nature of the transition state where the C-C bond is formed. To verify the favourable pathway, chiral titanium complexes were prepared and alkylation carried out. The alkylation results suggest that one equivalent of Grignard is sufficient to give good yields of the alkylated product and the reaction may proceed through a Ti(IV) promoted path. It was reported in the literature that at least three equivalents of Grignard reagent are required to get good yields of the alkylated product with zirconium complexes. This work suggests a greener alternate to alkylation of imines. Chapter 3 “Asymmetric Transfer Hydrogenation Reaction of Ketones in Water” deals with the synthesis of chiral ruthenium half-sandwich complexes employing a proline diamine ligand which has phenyl, ethyl, benzyl, or hydrogen as a substituent. These complexes were characterized by X-ray diffraction. In addition, all these complexes were obtained as single diastereoisomers. These complexes were used as catalysts for the reduction of a variety of ketones to chiral alcohols in water using sodium formate as a hydride source. Stoichiometric reaction between sodium formate and the catalysts showed the formation of hydride complexes as the active species. Based on the electronic effects observed, the key step is found to be a nucleophilic attack of hydride on the carbonyl carbon of ketones. In the transfer hydrogenation reaction with DCOONa, more of 1-phenylethanol- 1-2H1 was observed with all the ruthenium catalysts suggesting that the hydrogen from sodium formate is transformed into a metal hydride which is subsequently transferred to the ketones to form chiral alcohols. The catalysts were optimized with acetophenone as a model substrate. Only in the case of a catalyst which has a phenyl substituent, silver nitrate was found to enhance the formation of aqua complex which in turn resulted in good yields of the chiral alcohols. Among all the complexes studied, the catalyst bearing a phenyl group induces greatest enantioselectivity. It can also be recycled. Chapter 4 “On the Formation of a Ruthenium-PPh2H Complex Using 1- Phenylethane-1,2-diol” deals with the mechanism of formation of PPh2H from PPh2Cl. This unique transformation involves a ruthenium-cymene dimer, PPh2Cl and 1-phenylethane-1,2- diol. In the attempted synthesis of a ruthenium bisphosphinite complex, using the ruthenium-cymene dimer, chlorodiphenylphosphine and 1-phenylethane-1,2-diol, the formation of [Ru(η6-cymene)Cl2PPh2H] was observed in good yield. Formation of the expected ruthenium bisphosphinite complex was not observed. The reaction was carried out in the absence of 1-phenylethane-1,2-diol resulted in the formation of [Ru(η6- cymene)Cl2PPh2Cl] suggests that the diol acts as a reducing agent. To verify the source of hydrogen in the 1-phenylethane-1,2-diol, deuterated diols were prepared. The reactions with the deuterated diols revealed several interesting aspects of the formation of the Ru-PPh2H complex. Chapter 5 “Mechanistic Studies on the Diazo Transfer Reaction” deals with the synthesis of labelled azides and the labelled azidating reagent to probe the mechanism of the diazo transfer reaction. Azides are important precursors used for a variety of chemical transformations including the celebrated Cu(I) catalyzed click reaction. Azides are also used as protecting groups for amines as they can be conveniently reduced to amines. Azidation of amines usually yield azides, with retention of stereochemistry. There is a possibility that the azide formation can occur through the SNi mechanism with retention of configuration where nitrogen in the starting material will not be retained after forming an azide. The reaction was carried out with 13C and 15N labelled L-valine and L-isoleucine to probe this possibility. The resultant labelled azide has 15N retained in its position. This excluded the SNi pathway. To show where the nucleophilic amine group is attacking the azide, labelled imidazole-1¬sulfonyl azide was synthesized from NaN215N. Reactions were carried out with L-valine (labelled and unlabelled) in the presence of a metal catalyst and with unlabelled L-valine in the absence of catalyst. These results confirm the postulated pathways described in the literature.

Numerous organisms produce ornately detailed inorganic structures (often known as shells) with features on length scales from 50 nm to several centimeters. One class of such organisms are the diatoms; microscopic algae that form silica frustules. Another group of algae, the coccolithophorids, produce similar calcium carbonate structures. Over 100,000 species comprise these two classes of algae, every one of which is endowed with a unique cytoskeleton structure. Using various types of displacement reactions, the chemistry of the original structure can be modified to produce a new material. Magnesium vapor has been found to displace the silicon in diatom frustules to yield an MgO structure. The conversion has been reported at temperatures from 650°C to 900°C. In the current work, the conversion and processing of silica frustules to MgO was examined in depth. The effect of reaction temperature on grain size and extent of conversion was evaluated. With the goal of obtaining high purity MgO structures, various methods for removing the silicon products of reaction were investigated. Wet chemistry and high temperature vapor etches were evaluated. The MgO reaction served as an intermediate step in the production of magnesium tungstate diatoms, which were imbued with photoluminescent properties. Reactions were identified to allow the conversion of calcium carbonate (calcite) structures to alternative chemistries. Calcite sand-dollars were converted to calcium tungstate or calcium molybdate by aqueous solution chemistry. In this process, sand dollar tests (shells) and coccolithophore frustules were reacted with ammonium para-molybdate or ammonium para-tungstate. The reactions were evaluated for shape preservation, phase purity, and photoluminescence of the structures.

The chemical bond – a corner stone in science and a prerequisite for life – is the focus of this thesis. Fundamental and applied aspects of chemical bonding are covered including the development of new computational methods for the characterization and rationalization of chemical interactions. The thesis also covers the study of corrosion of copper-based materials. The latter is motivated by the proposed use of copper as encapsulating material for spent nuclear fuel in Sweden. In close collaboration with experimental groups, state-of-the-art computational methods were employed for the study of chemistry at the atomic scale. First, oxidation of nanoparticulate copper was examined in anoxic aqueous media in order to better understand the copper-water thermodynamics in relation to the corrosion of copper material under oxygen free conditions. With a similar ambition, the water-cuprite interface was investigated with regards to its chemical composition and reactivity. This was compared to the behavior of methanol and hydrogen sulfide at the cuprite surface. An overall ambition during the development of computational methods for the analysis of chemical bonding was to bridge the gap between molecular and materials chemistry. Theory and results are thus presented and applied in both a molecular and a solid-state framework. A new property, the local electron attachment energy, for the characterization of a compound’s local electrophilicity was introduced. Together with the surface electrostatic potential, the new property predicts and rationalizes regioselectivity and trends of molecular reactions, and interactions on metal and oxide nanoparticles and extended surfaces. Detailed atomistic understanding of chemical processes is a prerequisite for the efficient development of chemistry. We therefore envisage that the results of this thesis will find widespread use in areas such as heterogeneous catalysis, drug discovery, and nanotechnology. / Den kemiska bindningen – en hörnsten inom naturvetenskapen och oumbärlig för allt liv – är det centrala temat i den här avhandlingen. Både grundläggande och tillämpade aspekter behandlas. Detta inkluderar utvecklingen av nya beräkningsmetoder för förståelse och karaktärisering av kemiska interaktioner. Dessutom behandlas korrosion av kopparbaserade material. Det sistnämnda är motiverat av förslaget att använda koppar som inkapslingsmaterial för hanteringen av kärnavfall i Sverige. Kvantkemiska beräkningsmetoder enligt state-of-the-art har använts för att studera kemi på atomnivå, detta i nära sammabete med experimentella grupper. Initialt studerades oxidation av kopparnanopartiklar under syrgasfria och vattenrika förhållanden. Detta för att bättre kartlägga koppar-vattensystemets termodynamik. Av samma orsak detaljstuderades även gränsskiktet mellan vatten och kuprit med fokus på dess kemiska sammansättning och reaktivitet. Resultaten har jämförts med metanols och vätesulfids kemiska beteende på ytan av kuprit. En övergripande målsättningen under arbetet med att utveckla nya beräkningsbaserade analysverktyg för kemiska bindningar har varit att överbrygga gapet mellan molekylär- och materialkemi. Därför presenteras teoretiska aspekter samt tillämpningar från både ett molekylärt samt ett fast-fas perspektiv. En ny deskriptor för karaktärisering av föreningars lokala elektrofilicitet har introducerats – den lokala elektronadditionsenergin. Tillsammans med den elektrostatiska potentialen uppvisar den nya deskriptorn förmåga att förutsäga samt förklara regioselektivitet och trender för molekylära reaktioner, och för interaktioner på metal- och oxidbaserade nanopartiklar och ytor. En detaljerad förståelse av kemiska processer på atomnivå är en nödvändighet för ett effektivt utvecklande av kemivetenskapen. Vi förutspår därför att resultaten från den här avhandlingen kommer att få omfattande användning inom områden som heterogen katalys, läkemedelsdesign och nanoteknologi. / <p>QC 20170829</p>