1 examined the temporal and spatial distribution of total ammonia nitrogen (TAN) and un-ionized ammonia (NH,) in sediment pore water and compared the temporal and spatial patterns of TAN and NH, in overlying surface water with those in pore water, to determine if they were reaching concentrations known to be deleterious to fingernail clams. Pore water was obtained by core extraction and subsequent centrifugation. TAN and NI-I3 in pore water were measured from May through December 1994, at ninety two sites in pool 8, upper Mississippi River, to a depth of five centimeters below the sediment-water interface. TAN and NH3 in pore water were significantly different among sampling dates; with the greatest concentrations occurring in the summer months. Tan and N1-I3 in pore water was significantly greater in impounded open water and backwater side channel habitats and least in main channel border habitat. Tan and NH3 in surface water were significantly less than those in pore water from all of the habitats studied. Analysis of sediment substrate physical features, found that fingernail clam density and occupance were correlated to texture, with fingernail clams preferring silt loam and loam textures. Analysis of the data determined fingernail clams have a preference for particular water depths. It was found that a positive correlation exists between the occurrence and abundance of may flies and fingernail clams. Additionally, this study found a positive correlation between the density of dead fingernail clams (as per empty shells) and the abundance of live fingernail clams. Sites that contained a mean NI-I, concentration below 36 ug/L possessed the largest numbers of fingernail clams. When the mean un-ionized ammonia was above 36 ug/l, fingernail clam density declined precipitously-- 36 ug/L NH3 is the concentration demonstrated to inhibit growth of fingernail clams in laboratory studies. Mean concentrations of NH, in pore water at sites containing fingernail clams was 40 ug/L and ranged from 3 to 100 ug/L. At sites where fingernail clams were nonexistent, NH3 ranged from 3 to 375 ug/L with a mean of 57 ugfL. Mean un-ionized ammonia concentrations at sites containing fingernail clams were significantly different from and consistently lower than sites without fingernail clams. / Department of Natural Resources and Environmental Management

The local substrate composition of large rivers varies with local current velocity and high flow events. We evaluated effects of hydrology on local substrate variation for 28 Wabash River sites from 2005-08, and subsequent variation in fish assemblages using multivariate analyses. Sites were 500-m in length and fish were collected by boat electrofisher. Substrate collection methods were compared by way of habitat pole, developed by Ohio River Valley Sanitation Commission (ORSANCO), and substrate grabs. We characterized hydrologic variation with the Indicators of Hydrologic Alteration (IHA) software. We determined important driving variables of fish assemblages, substrates, and hydrology with Principle Components Analysis. Temporal effects of hydrology and substrate variation on taxonomic and functional fish assemblages were determined by repeated measures ANOVA. The analyses resulted in annual variation in fish assemblage structure, substrates and hydrologic variation. Significant relationships were found for fish assemblage structure, substrate variation, and hydrologic variation. . Our Mantel tests resulted in significant concordance among hydrology, local substrate variation, and fish assemblage structure variables in years 2005, 2006, and 2008, but not in 2007. These results demonstrated that Wabash River fish assemblages respond to substrate variation and substrate variation is controlled largely by hydrology. A comparison of substrate quantification approaches demonstrated that the habitat pole and substrate grabs are both effective ways to describe fish assemblages but the costs of grabs outweigh the cost of the pole method. / Department of Biology

There is no abstract available for this dissertation. / Department of Natural Resources and Environmental Management

Destruction of ecosystems and infrastructure can be caused by melting of massive ice within permafrost. To predict potential melting caused by natural and human disturbance, we need to know the nature and origin of massive ice deposits. The purpose of this research was to evaluate the nature of massive ice in coarse-grained sediments that accepted theories suggest should not occur. / Degradation of ice-rich granular resources is expensive and difficult to rehabilitate and can cause developmental thermokarst, overestimation of granular resources, disturbance of wildlife habitat and create conflicts with traditional land uses. / To locate massive ice we used a resistivity geophysical technique and to characterize the ice we used geochemical, petrographic and stratigraphic techniques. The resistivity technique detected bodies of massive ice and ice-rich sediments and coarse-grained sediments at high resolutions and laboratory analysis reveal that the ice was of glacial origin. / These findings indicate that massive ice of glacial origin occurs in coarse-grained sediments in permafrost. The techniques used in this study could form the basis of a predictive model of massive ice occurrence.

Biological invasions threaten the stability and biodiversity of freshwater ecosystems worldwide. The impacts of an invading species often vary across systems, making their prediction difficult. When data from multiple invaded sites are available, statistical models can be developed to correlate an invader's distribution and abundance with local environmental variables; such models could then provide managers with useful tools to help prioritize efforts to control the invader. The introduction of the zebra mussel (Dreissena polymorpha) and quagga mussel (D. bugensis) to North America ranks among the most ecologically and economically disruptive aquatic invasions ever documented. While some attempts have been made to predict zebra mussel occurrence and abundance, none have been made for quagga mussels. Furthermore, few studies have been based on river systems, which possess the bulk of North American freshwater biodiversity. I related zebra and quagga mussel occurrence and biomass to physical habitat variables (calcium concentration, substrate size and depth) in the St. Lawrence River. I then developed predictive models of abundance for each species from combinations of these variables. Each variable explained a significant amount of variation in mussel biomass, but different combinations of variables were obtained for each species. Although these models do not account for all of the variation in abundance, they do provide a useful basis for predicting dreissenid distribution and abundance in other invaded river systems.

Biological invasions are a global phenomenon that can threaten native species and disrupt ecosystem processes. Exotic species also impact ecosystems in less conspicuous ways by provoking native species to alter their foraging behaviour. Subtle impacts such as diet shifts are frequent, and can have consequences for food web dynamics and the fitness of native predators. Diet shifts involving the consumption of exotic species require native predators to recognize, capture and handle novel prey. In this thesis, I document a diet shift in the St. Lawrence River involving a common native fish and Eurasian mussels that invaded the river in the early 1990s. I conducted diet analysis of yellow perch (Perca flavescens) at multiple sites in the upper St. Lawrence River and discovered that they consumed substantial quantities of zebra and quagga mussels (Dreissena spp.) in the Soulanges Canal, an artificial waterway west of Montreal. This was unexpected because perch lack adaptations for crushing molluscs. This foraging innovation was not observed at the same site in the early 1990s or at other sites at any time. Mussel shells were weaker at this site, probably because of exposure to calcium-poor water. This suggests that water chemistry mediates yellow perch predation on mussels. This study provides an example of diet shifts involving exotic prey and illustrates the influence of abiotic factors on species interactions.

No description available.

No description available.

No description available.

Austroglanis gilli and A. barnardi are endemic to the Clanwilliam-Olifants System in the Western Cape, South Africa. The populations of each of these species are considered to be threatened by various anthropogenic activities, which include inappropriate agricultural practice and impacts of alien invasive fish species. The purpose of this thesis was to assess the life-history of these two endangered species in order to contribute to understanding their biology. Such information is vital for the development of strategies for their conservation. Marginal zone and marginal increment analyses from sectioned lapilliar otoliths of both A. gilli and A. barnardi showed a unimodal peak, suggesting a single annulus formation. The oldest specimens of A. gilli and A. barnardi were 12+ and 14+ years, respectively. The growth of A. gilli and A. barnardi was relatively slow and was best described by the von Bertalanffy growth curve as: L, = 131.56(1 - exp(- 0.27(t - 1.18 ))) for male and L, = 113.86(1 - exp(- 0.43(1- 0.74))) for female A. gilli from the Rondegat River. In the Noordhoeks River, growth was L, = 99.67(1 - exp(- 0.53(t - 0.35))) for male and L, = 96.60(1 - exp(- 0.64(t - 0.11 ))) for female A. gilli, and L, =71.02(1-exp(-0.26(1-3.07))) and L, = 69.50(1-exp(-0.36(1 - 1.88))) for male and female A. barnardi, respectively. The average natural mortality for the combined sexes was estimated using catch curve analysis at 0.37 ± 0.12 per year for A. gilli from the Rondegat River, and at 0.71 ± 0.05 and 0.39 ± 0.04 per year for A. gilli and A. barnardi from the Noordhoeks River, respectively. For A. gilli in the Rondegat River, the first maturity was estimated at 3.3 years (97.3 mm SL) for males and 3.1 years (94.3 mm SL) for females. In the Noordhoeks River, the first maturity for A. gilli was estimated at 2.0 years (71.9 mm SL) for males and 1.7 (66.4 mm SL) for females, and for A. barnardi at 2.0 (55.0 nun SL) for males and 2.9 years (58.9 mm SL) for females. Maturity corresponded closely to the asymptotic sizes from the von Bertalanffy curves, suggesting a shift in energy use from somatic growth to gonad development. Macroscopic assessment of the state of gonads, the Ganado-somatic index and histological examinations revealed that both A. gilli and A. barnardi have a single spawning season. The presence of oocytes in different stages of development in each of the ovaries of mature females collected between November and January suggested asynchronous, iteroperous serial spawning. The resorption of yolk was observed from ovaries collected between February and March and no vitellogenic oocyte was visible from ovaries collected between April and August. A similar trend was observed for males, with spermatozoa filling the lumen between November and January and some residual spermatozoa being present in the lumens soon after the breeding season. Spermatocytes and spermatids were dominant in the testes until October. An Index of Relative Importance revealed that A. gilli feeds predominantly on the benthic macroinvertebrate larvae of Ephemeroptera (particularly Baetidae), Diptera (particularly Chironomidae and Simuliidae) and Trichoptera. Austroglanis barnardi feeds predominantly on dipteran larvae (particularly Chironornidae and Simuliidae). Chi square contingency tables showed a significant difference in the dominant prey items of A. gilli and A. barnardi in the Noordhoeks River (X₂= 53.79, d.f. = 4, p > 0.001) and A. gilli between Rondegat and Noordhoeks rivers (x₂ = 34.74, d.f. = 4, p > 0.001). The Spearman's rank correlation test showed no shifts in the diet of A. barnardi from Noordhoeks River and A. gilli from Rondegat River with a change in size and season (p>O.OS). However, there was a shift in the diet of A. gilli from the Noordhoeks River which could suggest a distinct patchiness of benthic macroinvertebrates between the riffle feeding areas used by juveniles and other biotopes used by adults. The occurrence, in stomach contents, of other prey items from a wide variety of taxa and the presence of allochthonous material from the terrestrial environment could suggest an opportunistic feeding guild for both Austroglanis species. The life-history traits of A. gilli and A. barnardi, which are charaterized by slow growth, long life span and low relative fecundity, indicate that both species are relatively precocial and K-selected. The population of a precocial species is relatively stable and if population numbers were to be greatly reduced, they would require a long time to rebuild. An urgent conservation intervention is therefore recommended for Austroglanis spp. so as to maintain the diversity of populations within these species. The creation of protected river reserves and raising public conservation awareness may minimise activities that result in altered river hydrology and the destruction of complex benthic habitats.