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Regiospecific Synthesis of Ortho Substituted PhenolsBalasainath, Ravindra Kotha 01 August 2011 (has links)
Phenol is highly reactive toward electrophilic aromatic substitution. By this general approach, many groups can be appended to the ring, via halogenation, acylation, sulfonation, and other processes. Phenol contains the hydroxyl group (–OH), which is a strongly activating ortho/para directing group in aromatic electrophilic substitution (AES). AES gives a mixture of ortho-and para isomers, which must be separated.
The strong directing ability of phenol can also result in multiple substitutions on the aromatic ring which could be a major concern in the regiospecific synthesis of phenols. AES and Directed ortho--Metalation (DoM) are the only ways to directly substitute a proton on an aromatic ring and to synthesize regiospecifically substituted phenols. Phenol is a versatile precursor to a large collection of drugs, most notably aspirin, but also many herbicides and pharmaceuticals. AES reactions are useful in regiospecific synthesis as a way of introducing many reactive groups on the benzene ring and also help us to design a suitable method for synthesizing compounds in an efficient manner.
Dimethylbenzylamine products are obtained as a result of the reaction of phenols with Eschenmoser’s salt (N,N-Dimethylmethyleneiminium iodide). This approach enables us to prepare regiospecifically ortho substituted phenols by using the AES protocol. We have discovered that Eschenmoser’s salt has the ability in basic medium containing triethylamine (TEA) to remove the proton and bond to the aromatic ring exclusively in ortho position to the –OH substituent.
Our research work focused on efforts to render isolated products with minimum impurities, greener and more atom economical by use of limiting reagent in the reactions. For the purpose of evaluation of the obtained compounds and intermediates we use Gas Chromatography (GC), Gas Chromatography coupled with Mass Spectrometry (GC-MS) and Nuclear Magnetic Resonance (NMR).
Our future work is to synthesize novel benzoheterocyclic compounds from the ortho-derivatised phenols as well as multi-substituted aromatic compounds. The dimethylamino methyl group can act as a directing group in the ortho-lithiation process; subsequent ortho--metalation and treatment with electrophiles generates 1,2,3- trisubstituted phenolic derivatives. Thus, phenolic precursors can be transformed into numerous derivatives which can be used in the chemical, agricultural and pharmaceutical industries.
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Approche théorique de la réactivité des isonitriles en chimie organique / Theoretical aspects of the reactivity of isocyanides in organic chemistryChéron, Nicolas 18 November 2011 (has links)
Les isonitriles sont des espèces connues depuis longtemps, mais étudiées depuis peu. Une approche théorique a permis de s'intéresser en détails aux réactions de Nef et de Ugi. Nous nous sommes tout d'abord focalisés sur la première. Après en avoir élucidé le mécanisme, nous avons étudié l'effet du solvant et nous avons proposé de nouvelles conditions expérimentales. Nous avons ensuite étudié l'influence des groupements de l'acyl, de l'isonitrile et du groupe partant. L'ensemble des variations considérées a pu être rationalisé en reliant l'énergie d'activation au pKa du groupe partant. En parallèle, nous avons étudié la réaction de Ugi. Le mécanisme proposé par Ugi pour cette réaction complexe n'avait toujours pas été vérifié 50 ans après sa découverte. Une étude quasi-exhaustive des différents mécanismes possibles a été menée, en utilisant une approche originale mêlant théorie et expériences. Le mécanisme de cette réaction a ainsi été démontré, tant dans le méthanol que dans le toluène. Les étapes cinétiquement déterminantes et les forces motrices ont été mises en lumière et diffèrent de celles proposées par Ugi. Une variation de la réaction de Ugi est le couplage Ugi-Smiles pour lequel de nombreux résultats expérimentaux n'ont toujours pas trouvé d'explications. Nous nous sommes donc intéressés au réarrangement de Smiles. Nous avons montré l'importance d'une liaison hydrogène intramoléculaire sur la faisabilité de la réaction, et nous avons étendu cette observation aux réactions intermoléculaires. Nous avons également étudié l'influence des substituants des quatre réactifs sur les barrières afin de construire un modèle prédictif. / Isocyanides are known for a long time, but have been studied only recently. A theoretical approach allowed us to investigate in details the Nef and the Ugi reactions. We first focused on the former. After elucidating its mechanism, we studied solvent effects and proposed new experimental conditions. We then studied the acyl moiety and isocyanide influences, such as the leaving group one. All the variations were rationalized by linking the activation energy to the leaving group pKa. Simultaneously, we studied the Ugi reaction. The mechanism proposed by Ugi for this complex reaction was still unverified 50 years after its discovery. A thorough and quasi-complete study of all the possible mechanisms were lead, using a mixed theoretical and experimental approach. The mechanism of this reaction was demonstrated, in both methanol and toluene. Rate determining steps and driving forces were highlighted and differ from those proposed by Ugi. A variation of the Ugi reaction is the Ugi-Smiles coupling, for which numerous experimental results are still unexplained. We thus studied the Smiles rearrangement. We showed the key-role of an intramolecular hydrogen bond on the reaction feasibility, and extended this observation to intermolecular reactions. We also studied the four substituent influence on the barrier, aiming to build a predictive model.
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Deciphering the Catalytic Mechanism of the Zn Enzyme Glutaminyl Cyclase and the Deduction of Transition-State Analog InhibitorsPiontek, Alexander 25 April 2014 (has links)
No description available.
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Modèles prédictifs pour les paramètres cinétiques et thermodynamiques des réactions chimiques / Predictive models for kinetic and thermodynamic parameters of reactionsGimadiev, Timur 11 July 2018 (has links)
Ce travail est consacré à la modélisation QSPR des propriétés cinétiques et thermodynamiques des réactions chimiques à l'aide de l'approche Graphe Condensé de Réaction (CGR). Le CGR permet de coder des structures de réactifs et de produits en un seul graphe moléculaire pour lequel des descripteurs moléculaires peuvent être générés.Une base de données contenant plus de 11000 réactions collectées manuellement a été développée puis utilisée dans la modélisation. Les modèles prédictifs ont été construits pour les constantes de vitesse de réactions Diels-Alder, SN2 et E2 ainsi que pour les constantes d'équilibre des transformations tautomères. Ils sont rendus publics via un portail WEB. Une partie de la thèse concerne une étude de mécanique quantique des réactions entre des sydnones et des alcynes contraints pour lesquels la taille du jeux de données n'était pas suffisante pour produire des modèles statistiquement significatifs. / This work is devoted to QSPR modeling of kinetic and thermodynamic properties of chemical reactions using the Condensed Graph of Reaction (CGR) approach. CGR allows encoding structures of reactants and products into one sole molecular graph for which molecular descriptors can be generated. A comprehensive database containing some 11000 manually collected reactions has been developed then used in the modeling. Predictive models were built for rate constants of Diels-Alder, SN2 and E2 reaction as well as for equilibrium constants of tautomeric transformations. They are available for the users via WEB portal. A part of the thesis concerned quantum mechanics studies of reactions between sydnones and strained alkynes for which the size of the dataset was not sufficient to produce statistically meaningful models.
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Molekulové modelování - struktura a vlastnosti katalyzátorů na bázi karbenů / Molecular modelling - Structure and Properties of carbene-based catalystKulovaná, Eva January 2012 (has links)
Pomocí molekulového modelování je možné předpovídat chování nových látek a napomáhá při jinak obtížné interpretaci experimentálních dat. Cílem práce byla predikce vybraných vlastností polymeračních katalyzátorů na bázi karbenů, predikce jejich struktur a spektrálních charakteristik a studie mechanismu polymerace za otevření kruhu laktidu. K ověření chování karbenů a jejich prekurzorů ve formě chloridů byly studovány vybrané charakteristiky molekuly. Byl proveden výpočet vybraných molekulových orbitalů a elektrostatických map. Následně pomocí počítačových programů byly získány teoretické vazebné délky a úhly vybraných imidazolových a imidazolinových sloučenin, karbenů a jejich možných produktů hydrolýzy. Data strukturně podobných, již charakterizovaných sloučenin, byla získána z CCDC (Cambridge Crystallographic Data Centre) a následně byla konfrontována s vypočítanými daty. Byla změřena infračervená a Ramanova spektra imidazolové soli a infračervené spektrum příslušného karbenu. Tato spektra byla konfrontována s napredikovanými. Pro lepší interpretaci spekter byla spočítána spektra možných produktů hydrolýzy. Následně byl studován mechanismus polymerace za otevření kruhu laktidu. Na základě spočítaných energií stacionárních bodů byl navržen nový mechanismus polymerace.
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Análise químico-computacional de sistemas catalíticos a base de paládio contendo ligantes do tipo Brookhart-Guan modificados. / Chemical computational analysis of palladium based catalytic systems containing Brookhart-Guan type liganos.Ferreira, Daví Alexsandro Cardoso 07 March 2008 (has links)
We were accomplished modeling employing chemical-computational tools in order to
foreknow the influence of a chiral environment on the active center of catalytic diimina
Brookhart-Guan modified systems proposed by our Group. These complexes are used to
produce branched or linear chains of polyethylene, having ethene as the single monomer.
In this study, a computational design of a cyclophane diiminie chiral ligand,
Brookhart-Guan modified type, and its respective palladium complex have been attained.
Also, a computational studied related to the microstructure of the polyethylene obtained have
been achieve. For that, growing chains have been simulated bearing branches that must be
correctly oriented due to the esteric and chiral (using the FTFT like ligand) environments
present at the active center also, modeling for possibilities of transition state in the insertion
step for desired complex. This work can lead to a suitable design of a catalyst, besides to
forecast the structural characteristics of the polymers obtained from this type of catalytic
system. At the same way, those simulations allow to understand the effect observed in those
type of Pd-diimine catalytic complexes for ethane polymerization. / Coordenação de Aperfeiçoamento de Pessoal de Nível Superior / Neste trabalho foram realizadas modelagens empregando ferramentas químicocomputacionais,
com o objetivo de prever a influência que um ambiente quiral em torno do
centro de atividade de sistemas catalíticos Pd-diimínicos do tipo Brookhart-Guan
modificados, proposto pelo nosso Grupo. Estes complexos catalíticos podem ser utilizados
para a obtenção de cadeias lineares ou ramificadas de polietileno, tendo-se como único
monômero o eteno.
Neste estudo foi realizado o design computacional de um pré-ligante do tipo ciclofano
diimínico quiral, do tipo Brookhart-Guan modificado, e de seu respectivo complexo de
paládio. Além disso, foi realizado o estudo computacional relativo à microestrutura do
polímero a ser obtido empregando eteno como único monômero. Para tanto, foram modeladas
cadeias em crescimento apresentando ramificações que devem ser orientadas em função do
ambiente estéreo e assimétrico (usando o ligante FTFT) em torno do centro catalítico, além de
modelagens para os possíveis estados de transição na etapa de inserção para o complexo
desejado. Este trabalho de poderá proporcionar o adequado design do catalisador, além de
prever as características estruturais do polímero obtido com este sistema catalítico. Da mesma
forma, as simulações permitem compreender os efeitos observados para catalisadores a base
de Pd-diimina na polimerização do eteno.
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Catalytic Consequences of Active Site Environments in Brønsted Acid Aluminosilicates on Toluene MethylationSopuruchukwu A Ezenwa (18498339) 03 May 2024 (has links)
<p dir="ltr">Zeolites are microporous crystalline aluminosilicates that are widely used as catalysts for upgrading hydrocarbons and oxygenates to higher value chemicals and fuels. The substitution of tetrahedral Si<sup>4+</sup> with Al<sup>3+</sup> in a charge-neutral silica framework ([SiO<sub>4/2</sub>]) generates anionic centers ([AlO<sub>4/2</sub>]<sup>-</sup>), which charge-compensate Brønsted acid protons (H<sup>+</sup>) that serve as active sites for catalysis. Brønsted acid sites in aluminosilicates of diverse topologies have similar acid strength, but can be located within varying intracrystalline (or internal) microporous environments (0.4‒2 nm diameter) or at extracrystalline (or external) surfaces and mesoporous environments (>2 nm diameter); yet, catalytic diversity exists, <i>even</i> for a fixed zeolite framework topology, because micropores impose constraints on molecular access to and from intracrystalline active sites and provide van der Waals contacts that influence the stabilities of reactive intermediates and transition states. Tailoring the material properties of a given zeolite framework for targeted catalytic applications requires strategies to design both the bulk crystallite properties (e.g., morphology, active site density) that influence intracrystalline diffusion and the secondary environments that surround active sites and influence intrinsic kinetics, and further necessitates molecular-level insights to elucidate the influences of bulk and active site properties on catalysis. In this work, we provide synthetic and post-synthetic strategies to respectively tune active site environments within varying micropore voids and at external surfaces of zeolites, and develop gas-phase toluene methylation and liquid-phase mesitylene benzylation as probe reactions to quantify the catalytic consequences of active site environments on aromatic alkylation catalysis.</p><p dir="ltr">The MFI framework (orthorhombic phase) consists of 12 crystallographic distinct tetrahedral-sites and 26 unique framework oxygen atoms located around channels (~0.55 nm diameter) or channel intersections (~0.70 nm diameter). The synthesis of MFI zeolites using the conventional tetra-<i>n</i>-propylammonium (TPA<sup>+</sup>) organic structure directing agent (OSDA) is known to place framework Al and their attendant H<sup>+</sup> sites within the larger intersection environments, because electrostatic interactions are favorable between such locations of [AlO<sub>4/2</sub>]<sup>-</sup> and the quaternary N<sup>+</sup> center in TPA<sup>+</sup> that becomes positioned rigidly within channel intersections during crystallization. The methylation of toluene by dimethyl ether (DME; 403 K) on MFI-TPA zeolites of fixed active site densities (~2 Al per unit cell) result in <i>ortho</i>-xylene (<i>o</i>-X; ~65%) as the major product over <i>para</i>-xylene (<i>p</i>-X; ~27%) and <i>meta</i>-xylene (<i>m</i>-X; ~8%). In contrast, toluene methylation on MFI zeolites (~2 Al per unit cell) synthesized using non-conventional OSDAs, such as ethylenediamine (EDA) or 1,4-diazabicyclo[2.2.2]octane (DABCO), predominantly forms <i>p</i>-X (~75%) over <i>o</i>-X (~23%) and <i>m</i>-X (~2%). Within the subsets of MFI-TPA and MFI-EDA/DABCO zeolites, measured xylene formation rates and isomer selectivities are independent of crystallite sizes (0.1‒13 µm), toluene conversions (0.02‒2.0%) and external H<sup>+</sup> content (up to 9% external H<sup>+</sup> per total Al), indicating negligible effects of diffusion-enhanced secondary xylene isomerization reactions at intracrystalline or extracrystalline domains. The invariance of xylene isomer selectivity with reactant pressures (0.2‒9 kPa toluene, 25‒66 kPa DME) or methylating agent (1‒4 kPa methanol) indicate that differences in reactivity of toluene to form each xylene isomer reflects differences in the stabilities of their respective kinetically relevant transition states that share the same reactive intermediate. Measured xylene isomer formation rate constants and rate constant ratios, obtained from mechanism-derived rate expressions and interpreted using transition state theory formalisms, are used alongside density functional theory (DFT) calculations to reveal that intersection void environments (~0.70 nm diameter) similarly stabilize all three xylene transition states over unconfined surfaces (>2 nm diameter) without altering the established aromatic substitution patterns, while channel void environments (~0.55 nm diameter) preferentially destabilize bulkier <i>o</i>-X and <i>m</i>-X transition states thereby resulting in high intrinsic <i>p</i>-X selectivity. DFT calculations reveal that the ability of protonated DABCO complexes to reorient within MFI intersections and participate in additional hydrogen-bonding interactions with anionic Al centers during synthesis, facilitates the placement of Al in smaller channel environments that are less favored by TPA<sup>+</sup>. These molecular-level details, enabled by combining synthesis, characterization, kinetics and DFT, establish a mechanistic link between OSDA structure, active site placement and transition state stability, and provide active site design strategies orthogonal to crystallite design approaches that rely on complex reaction-diffusion phenomena.</p><p dir="ltr">For various reactions including toluene methylation at higher reaction temperatures (573‒773 K) and toluene conversions (>10%), extracrystalline H<sup>+</sup> sites in MFI zeolites are reported to influence reactivity, selectivity, and deactivation behavior during catalysis in undesired ways. Post-synthetic chemical treatments to passivate external H<sup>+</sup> sites on MFI zeolites result in unintended (but not always undesirable) changes to bulk structural properties and Al and H<sup>+</sup> contents. The number of extracrystalline H<sup>+</sup> sites is difficult to quantify using conventional spectroscopic or titrimetric methods, especially when present in dilute amounts on samples whose surfaces have been passivated. The systematic treatment of MFI zeolites (2.4, 5.7 and 7.1 Al per unit cell) using ammonium hexafluorosilicate (AHFS) at varying treatment duration times, AHFS concentrations and number of successive treatments resulted in MFI zeolites that retain their bulk structural properties and total Al and H<sup>+</sup> contents, except for one parent MFI sample containing a significant amount of non-framework Al species. The benzylation of mesitylene by dibenzyl ether (363 K) occurs exclusively at external H<sup>+</sup> sites because the bulky 1,3,5-trimethyl-2-benzylbenzene product is sterically prevented from forming at intracrystalline H<sup>+</sup> sites. The intrinsic zero-order rate constant (per external H<sup>+</sup>) for mesitylene benzylation is extracted from rate measurements (per total Al) on a suite of untreated MFI samples with known amounts of external H<sup>+</sup> sites (1‒15% external H<sup>+</sup> per total Al) quantified using bulky 2,6-di-<i>tert</i>-butylpyridine base titrants. Measured zero-order rate constants on AHFS-treated MFI zeolites are used to quantify the extent to which AHFS treatments passivate external H<sup>+</sup> sites, revealing efficacies that depend on the specific treatment conditions and the parent sample used. The developed kinetic methods demonstrate the utility of catalytic probes, when compared to stoichiometric probes based on spectroscopic or titration methods, in amplifying and quantifying dilute concentrations of external H<sup>+</sup> sites on zeolites. The methods enable comparisons of the efficacy of various post-synthetic passivation strategies and permit rigorous assessments of the influence of external H<sup>+</sup> during acid catalysis.</p><p dir="ltr">Overall, this work provides (post-)synthetic strategies to tune active site environments within intracrystalline micropores or at extracrystalline surfaces and develops quantitative kinetic probes that enable a molecular-level understanding of catalytic consequences of active site environments on aromatic alkylation reactions. Taken together, the methodology and findings of this study have broader implications in zeolite catalyst design for selectively upgrading traditional fossil feedstocks (crude oil and shale gas) and emerging feedstocks (biomass and waste plastics).</p>
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Mechanistic insights into enzymatic and homogeneous transition metal catalysis from quantum-chemical calculationsCrawford, Luke January 2015 (has links)
Catalysis is a key area of chemistry. Through catalysis it is possible to achieve better synthetic routes, exploit molecules normally considered to be inactive and also attain novel chemical transformations. The development of new catalysts is crucial to furthering chemistry as a field. Computational chemistry, arising from applying the equations of quantum and classical mechanics to solving chemical problems, offers an essential route to investigating the underlying atomistic detail of catalysis. In this thesis calculations have been applied towards studying a number of different catalytic processes. The processing of renewable chemical sources via homogeneous reactions, specifically cardanol from cashew nuts, is discussed. All routes examined for monoreduction of a diene model by [Ru(H)(iPrOH)(Cl)(C₆H₆)] and [Ru(H)(iPrOH)(C₆H₆)]⁺ are energetically costly and would allow for total reduction of the diene if they were operating. While this accounts for the need of high temperatures, further work is required to elucidate the true mechanism of this small but surprisingly complex system. Gold-mediated protodecarboxylation was examined in tandem with experiment to find the subtle steric and electronic effects that dictate CO₂ extrusion from gold N-heterocyclic carbene activated benzene-derived carboxylic acids. The origin of a switch in the rate limiting step from decarboxylation to protodeauration with less activated substrates was also clearly demonstrated. Studies of gold systems are closed with examinations of 1,2-difluorobenzene C–H activation and CO₂ insertion by [Au(IPr)(OH)]. Calculations highlight that the proposed mechanism for oxazole-derived substrates cannot be extended to 1,2-difluorobenzene and instead a digold complex offers more congruent predicted kinetics. The lens of quantum chemistry was turned upon palladium-mediated methoxycarbonylation reactions. An extensive study was undertaken to attempt to understand the bidentate diphosphine ligand dependency on forming either methylpropanoate (MePro) or copolymers. Mechanisms currently suggested in literature are shown to be incongruous with the formation of MePro by Pd(OAc)₂ and bulky diphosphines. A possible alternative route is proposed in this thesis. Four mechanisms for methoxycarbonylation with Pd(2-PyPPh₂)ₙ are detailed. The most accessible route is found to be congruent with experimental reports of selectivity, acid dependency and slight steric modifications. A modification of 2-PyPPh₂ to 2-(4-NMe₂-6-Me)PyPPh₂ is shown to improve both selectivity and turnover, the latter by four orders of magnitude (highest transition state from 22.9 kcal/mol to 16.7 kcal/mol ∆G), and this new second generation in silico designed ligand is studied for its applicability to wider substrate scope and different solvents. The final chapter of this thesis is a mixed quantum mechanics and molecular mechanics (QM/MM) examination of an enzymatic reaction, discussing the need for certain conditions and the role of particular amino acid residues in an S[sub]N2 hydrolysis reaction.
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Growth of unsaturated, cyclic, and polycyclic aromatic hydrocarbons: Reactions under the conditions of the interstellar medium / Wachstum ungesättigter, zyklischer und polyzyklischer aromatischer Kohlenwasserstoffe: Reaktionen unter den Bedingungen des interstellaren RaumesBarthel, Robert 26 March 2009 (has links) (PDF)
Hydrocarbons, in particular polycyclic aromatic hydrocarbons (PAHs), have been long discussed to be carriers of interstellar infrared (IR) emission and ultraviolet (UV) absorption features. Yet, their origin in dense phases of the interstellar medium (ISM), such as molecular clouds, remains unclear. In this work, growth mechanisms based on ion-molecule reactions between cationic PAHs/hydrocarbons and methyne (CH) were investigated. The reaction type and the precursor were derived and selected from known chemical and physical properties of the ISM. These chemical reactions were characterised by calculating branching ratios (based on cross sections) and capture rate coefficients, minimum reaction paths, reaction enthalpies, thermal equilibrium constants, and microcanonic isomerisation and radiative deactivation rate coefficients. In order to cope with the variety of reaction parameters, a hierarchic workflow scheme was set up. First, the reaction potential energy surface was sampled by molecular dynamics simulations. Then, minimum energy paths of the most probable reaction channels were investigated. Finally, molecular and kinetic properties of stationary points were calculated. The quantum chemical level of theory was increased at each step from DFTB (tight-binding density-functional), to DFT, and finally to post-Hartree-Fock methods. Results on CH based hydrocarbon growth showed the transition from non-cyclic hydrocarbons to cyclic and aromatic structures and from cyclic to polycyclic aromatic hydrocarbons. Additionally, the reactive collisions between hydrocarbons and CH were found to produce sufficient energy for isomerisation and fragmentation processes even at ultra low temperatures. In all, the results indicate that methyne might be a proper precursor for the formation of large interstellar PAHs. / Kohlenwasserstoffe, insbesondere polyzyklische Kohlenwasserstoffe (engl. PAHs), werden seit einigen Jahren als Mitverursacher interstellar IR-Emissions- und UV-Absorptionsbanden angesehen und diskutiert. Dabei ist die Herkunft dieser Moleküle in den dichten Phasen des interstellaren Mediums (ISM) aber noch nicht aufgeklärt. In dieser Arbeit wurden daher die Bildungsmechanismen, welche auf Ion-Molekül-Reaktionen zwischen kationischen PAHs und Kohlenwasserstoffen und dem Molekül CH beruhen, untersucht. Sowohl der Reaktionstyp als auch der Präkursor wurden anhand von bekannten physikalischen und chemischen Eigenschaften des ISM abgeleitet und ausgewählt. Die Analyse der chemischen Reaktionen basierte auf Berechnungen zur Produktzusammensetzung und Einfangsratenkoeffizienten (welche wiederum aus berechneten Reaktionsquerschnitten hervorgingen) Minimumenergiepfade (MEP), Reaktionsenthalpien, thermische Gleichgewichtskonstanten und mikrokanonische Isomerisierungs- und Strahlungsdeaktivierungs-Ratenkoeffizienten. Um der Vielzahl an Reaktionsparameter gerecht zu werden, wurden die Berechnungsmethoden entsprechend eines hierarischen Fließschemas kombiniert. Hierzu wurden zuerst durch Molekulardynamik-Simulationen die Reaktionspotentialenergieflächen abgerastert. Auf der nächsten Stufe wurden statistisch bedeutsame Reaktionskanäle bezüglich ihrer Minimumenergiepfade untersucht. Den Abschluss bildete die Berechnung molekularer und kinetischer Charakteristika stationärer Punkte auf einem MEP. Entsprechend dieses Schemas wurde die quantenchemische Genauigkeit auf jeder Stufe von approximativer DFT über DFT zu post-Hartree-Fock verändert. Die Ergebnisse des CH-basierten Kohlenwasserstoffwachstums zeigten einen Übergang von nichtzyklischen zu zyklischen and aromatischen Strukturen, sowie von zyklischen zu polyzyklischen Kohlenwasserstoffen. Außerdem zeigte sich, dass reaktive Kollisionen zwischen Kohlenwasserstoffen und CH auch bei Tiefsttemperaturen immer ausreichend Energie für Isomerisierungs- und Fragmentationsprozesse liefert. Die Ergebnisse dieser Arbeit lassen den Schluss zu, dass CH ein geeigneter Präkursor für die Bildung großer interstellarer PAH ist.
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Growth of unsaturated, cyclic, and polycyclic aromatic hydrocarbons: Reactions under the conditions of the interstellar mediumBarthel, Robert 02 October 2008 (has links)
Hydrocarbons, in particular polycyclic aromatic hydrocarbons (PAHs), have been long discussed to be carriers of interstellar infrared (IR) emission and ultraviolet (UV) absorption features. Yet, their origin in dense phases of the interstellar medium (ISM), such as molecular clouds, remains unclear. In this work, growth mechanisms based on ion-molecule reactions between cationic PAHs/hydrocarbons and methyne (CH) were investigated. The reaction type and the precursor were derived and selected from known chemical and physical properties of the ISM. These chemical reactions were characterised by calculating branching ratios (based on cross sections) and capture rate coefficients, minimum reaction paths, reaction enthalpies, thermal equilibrium constants, and microcanonic isomerisation and radiative deactivation rate coefficients. In order to cope with the variety of reaction parameters, a hierarchic workflow scheme was set up. First, the reaction potential energy surface was sampled by molecular dynamics simulations. Then, minimum energy paths of the most probable reaction channels were investigated. Finally, molecular and kinetic properties of stationary points were calculated. The quantum chemical level of theory was increased at each step from DFTB (tight-binding density-functional), to DFT, and finally to post-Hartree-Fock methods. Results on CH based hydrocarbon growth showed the transition from non-cyclic hydrocarbons to cyclic and aromatic structures and from cyclic to polycyclic aromatic hydrocarbons. Additionally, the reactive collisions between hydrocarbons and CH were found to produce sufficient energy for isomerisation and fragmentation processes even at ultra low temperatures. In all, the results indicate that methyne might be a proper precursor for the formation of large interstellar PAHs. / Kohlenwasserstoffe, insbesondere polyzyklische Kohlenwasserstoffe (engl. PAHs), werden seit einigen Jahren als Mitverursacher interstellar IR-Emissions- und UV-Absorptionsbanden angesehen und diskutiert. Dabei ist die Herkunft dieser Moleküle in den dichten Phasen des interstellaren Mediums (ISM) aber noch nicht aufgeklärt. In dieser Arbeit wurden daher die Bildungsmechanismen, welche auf Ion-Molekül-Reaktionen zwischen kationischen PAHs und Kohlenwasserstoffen und dem Molekül CH beruhen, untersucht. Sowohl der Reaktionstyp als auch der Präkursor wurden anhand von bekannten physikalischen und chemischen Eigenschaften des ISM abgeleitet und ausgewählt. Die Analyse der chemischen Reaktionen basierte auf Berechnungen zur Produktzusammensetzung und Einfangsratenkoeffizienten (welche wiederum aus berechneten Reaktionsquerschnitten hervorgingen) Minimumenergiepfade (MEP), Reaktionsenthalpien, thermische Gleichgewichtskonstanten und mikrokanonische Isomerisierungs- und Strahlungsdeaktivierungs-Ratenkoeffizienten. Um der Vielzahl an Reaktionsparameter gerecht zu werden, wurden die Berechnungsmethoden entsprechend eines hierarischen Fließschemas kombiniert. Hierzu wurden zuerst durch Molekulardynamik-Simulationen die Reaktionspotentialenergieflächen abgerastert. Auf der nächsten Stufe wurden statistisch bedeutsame Reaktionskanäle bezüglich ihrer Minimumenergiepfade untersucht. Den Abschluss bildete die Berechnung molekularer und kinetischer Charakteristika stationärer Punkte auf einem MEP. Entsprechend dieses Schemas wurde die quantenchemische Genauigkeit auf jeder Stufe von approximativer DFT über DFT zu post-Hartree-Fock verändert. Die Ergebnisse des CH-basierten Kohlenwasserstoffwachstums zeigten einen Übergang von nichtzyklischen zu zyklischen and aromatischen Strukturen, sowie von zyklischen zu polyzyklischen Kohlenwasserstoffen. Außerdem zeigte sich, dass reaktive Kollisionen zwischen Kohlenwasserstoffen und CH auch bei Tiefsttemperaturen immer ausreichend Energie für Isomerisierungs- und Fragmentationsprozesse liefert. Die Ergebnisse dieser Arbeit lassen den Schluss zu, dass CH ein geeigneter Präkursor für die Bildung großer interstellarer PAH ist.
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