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Current analysis of the life and death cycles of in vitro cellular systems is based on visual observation methods relying upon morphological changes monitored using a microscope. Data collected from these techniques are not as precise as scientists desire them to be. The methods are discontinuous, indirect, costly, and time and labor intensive. The human element plays a significant part in error propagation as individual style of the researcher lends to skewing the data. Experimental results will differ greatly from laboratory to laboratory just because the methods of monitoring cellular activity are not standardized. The researcher uses experience to determine the best way to collect data quickly and "accurately" according to his or her definition. There is a great need not only to standardize data collection processes, but also to eliminate human error induced by lack of experience or fatigue. This research proposes a fiber optic based monitoring system as a possible solution to eliminate a number of problems with current cellular data collection methods and to increase the data collection rate tremendously since the process could be automated. / Master of Science

<p> Mre11 and Rad50 form a complex with Nbs1 (MRN) in mammals and Xrs2 (MRX) in yeast. The MRN complex plays a role in many cellular processes, such as DNA damage sensing, DNA repair, cell cycle checkpoint and telomere maintenance. Rad50 contains a conserved ATP binding motif and its ATPase activity is essential for ATM activation in vitro. Using a tethering approach, I have shown that Rad50 can be targeted to telomeres through its fusion to hRap1. The fusion of hRap1 to Rad50 did not alter the property of Rad50. The fused wild-type Rad50 promoted telomerase-dependent telomere lengthening. However, the fusion proteins containing loss-of-function mutations in Rad50 (K42E and S1202R) did not. I have also shown that the fused wild-type Rad50 was able to form irradiation-induced foci in a manner similar to unfused Rad50. In contrast, the two defective mutants of Rad50 failed to accumulate irradiation-induced foci. Expression of the fusion proteins containing Rad50 mutants also interfered with the ability of endogenous Mre11 protein to form foci post irradiation. Thus our data suggest that the Rad50 mutants may function as dominant-negative alleles in cells.</p> / Thesis / Master of Science (MSc)

Cell homeostasis is maintained via strictly regulated processes. One of the important regulation systems is ubiquitin-proteasome proteolytic pathway. Proteins to be degraded are posttranslationally modified with polyubiquitin chains and targeted to the proteasome for degradation. Ubiquitin-proteasome system consists of several processes: ubiquitination of target substrates via set of enzymes, substrate transfer and degradation in the 26S proteasome. There are two ways of ubiquitinated substrate recognition via proteasome. It is either directly by proteasomal receptors or by protein shuttles. Shuttling factors bind polyubiquitinated target substrate and transfer it to the entrance of proteasomal cavity thanks to their typical domain architecture. The N-terminal ubiquitin-like domain binds to regulatory particle of the proteasome and the C-terminal ubiquitin-associated domain binds polyubiqitinated chains on substrates. This thesis focuses on the human DNA damage-inducible protein homolog 2 (Ddi2), a potential member of protein shuttles of humans, and on the interaction of its ubiquitin-like domain with its putative interaction partner, a proteasomal subunit PSMD2. PSMD2 has been cloned, expressed and purified in sufficient yields for further experiments. "Cold" as well as isotopically labeled UBL domain of...

Im Verlauf der Knochenbildung und Frakturheilung kommt es zu einem Zusammenwirken verschiedener Zell- und Gewebearten. Die beteiligten Zellen unterliegen dabei der Regulation von Wachstumsfaktoren (WF), Zytokinen und Hormonen, die den regelhaften Ablauf kontrollieren und steuernd in Proliferation und Differenzierung von Zellen und deren Matrixsynthese eingreifen. Neben einer optimalen Osteosynthese zur Frakturstabilisation stellt die biologische Beeinflussung der Knochenheilung ein großes Forschungsfeld dar. In Vorarbeiten wurde ein Applikationssystem entwickelt, das mittels einer biodegradierbaren Polymerbeschichtung auf Osteosynthesematerialien die lokale Applikation von WF in biologisch aktiver Form ermöglicht. In vivo wurde an Ratten- und Schweinemodellen erfolgreich die Stimulation der Knochenheilung durch lokal applizierte Wachstumsfaktoren IGF-I, TGF-ß1 und BMP-2 gezeigt. Ziel dieser Arbeit war die Untersuchung zellulärer Prozesse während der beeinflussten und unbeeinflussten Knochenheilung sowie des Effektes der lokalen Applikation von Wachstumsfaktoren von beschichteten Osteosyntheseplatten. Anhand histologischer und immunhistochemischer Untersuchungen, der in situ Hybridisierung an Knochenschnitten und der ELISA-Methode konnte ein früherer Reifungsbeginn des Kallus durch die Wachstumsfaktorenapplikation gezeigt werden, ohne dass es zu Veränderungen der physiologischen Gewebszusammensetzung und der endogenen Wachstumsfaktoren-Expression kam. Durch Zellkulturstudien an primären Osteoblasten und Osteoklasten wurde an isolierten Zelltypen die Wirkung der applizierten WF untersucht und ihr Effekt auf die Zelltypen dargestellt. Die Bildung ektoper Ossifikation im Weichgewebe durch die Wachstumsfaktoren wurde im Schafsmodell ausgeschlossen. Dies stellt einen wichtigen Sicherheitsaspekt beim Einsatz von Wachstumsfaktoren zur Stimulation der Knochenheilung dar. Die lokale Applikation der Wachstumsfaktoren von einer Plattenosteosynthese zur Osteotomiestabilsierung im Rattenmodell zeigte eine signifikante Verbesserung der biomechanischen Stabilität und der Kallusheilung 42 Tage nach Osteotomie Die aus diesen Studien gewonnenen Erkenntnisse liefern Aufschluss zur Weiterentwicklung biologischer Einflussmöglichkeiten auf den Knochenstoffwechsel und die Rolle von WF während der Frakturheilung. / In the process of bone formation and healing, different cell- and tissue types are formed. The cells involved are regulated by growth factors (GF), cytokines and hormones, which control the healing and affect the proliferation and differentiation of cells and their matrix synthesis. Besides the use of the optimal osteosynthesis for fracture stabilization, the biological influence of the bone healing represents a large research field. In previous work an application system for local application of GF in biologically active form was developed. In vivo studies revealed a stimulating effect of locally applied IGF-I and TGF-ß1 in a rat and a pig model. Goal of this work was the investigation of cellular processes during the influenced and uninfluenced bone healing. A further aim was the transfer of the local application method to further stabilization systems (plate osteosynthesis). On the basis of the histology, the immunohistology, in situ hybridizing and ELISA methods an earlier beginning of maturing of the callus by the growth factors could be shown, without changes of the physiological callus composition and the endogenous growth factors expression. In further cell culture studies on primary osteoblasts and osteoclasts the effect of the applied growth factors was examined and their effect on the cell types analyzed. The avoidance of ectopic ossification, an important safety aspect with the use of growth factors to stimulate bone healing, was investigated in a sheep model. It was also possible to proof the efficacy of locally applied growth factors delivered extramedullary from plates. The results of these studies provide further explanations for the action of the used growth factors and are necessary for the ongoing development of the application of growth factors for a clinical use.