The hydrolyses of naphthalene diimides (NDIs) bearing aliphatic side chains with N-methylpyrrolidinium groups placed two (1) and three (5) atoms from the central core were studied. The Ka values for the first and second hydrolyses for 1 were 2.5 ± 0.2 x 105 M-1 and 2.0 ± 0.1 x 102 M-1, respectively; for 5 they were 1.4 ± 0.1 x 105 M-1 and 44 ± 2 M-1, respectively. NDI 1 hydrolyzed 6.8 times faster than did 5. The rates for the first and second hydrolyses of 1 at 100 mM hydroxide measured by stopped-flow were 17.0 ± 0.2 s-1 and 53.0 ± 0.1 x 10-2 s-1, respectively. NMR showed both the syn and anti isomers of the diamide species. Syntheses of other derivatives are reported. Overall, this study shows that the rate of hydrolysis of NDIs is increased when the cationic charge is moved closer to the NDI core.

No description available.

Diimide generated from the hydrazine/hydrogen peroxide/catalyst system can be used to hydrogenate unsaturated polymers in latex form. As an economical and environmentally benign alternative to the commercial processes based on hydrogen/transition metal catalysts, this method is of special interest to industry. This thesis provides a detailed description of the diimide hydrogenation process. Reaction kinetics, catalysts and gel formation mechanism have been investigated. <br /> <br /> Four main reactions and a mass transfer process form three parallel processes in this system: diimide is generated at the interface of the latex particles; diimide diffuses into the organic phase to saturate carbon-carbon double bonds; diimide may be consumed at the interface by hydrogen peroxide, and may also be consumed by the disproportionation reaction in the organic phase. The two side reactions contribute to the low hydrogenation efficiency of hydrogen peroxide. Slowing down hydrogen peroxide addition and using stable interfacial catalysts may totally suppress the side reaction in the aqueous phase. The actual catalytic activity of metal ions in the latex depends on the hydrogen peroxide concentration and the addition procedure of reactants. Cupric ion provides better selectivity for hydrogenation than ferric ion and silver ion do. Boric acid as a promoter provides improved selectivity for hydrogenation and faster diimide generation rate. The side reaction in the rubber phase results in low efficiency and gel formation. The rate constants of the four reactions in this system are estimated. <br /> <br />It is shown that the hydrogenation of nitrile rubber latex with an average particle diameter of 72 nm is mainly a reaction-controlled process. Diimide diffusion presents limitation upon hydrogenation at high hydrogenation degree range. Antioxidants can not effectively inhibit gel formation during hydrogenation. Hydrogenation of a core-shell latex with NBR as the shell layer should be able to achieve a higher efficiency, a higher degree of hydrogenation and a lower level of crosslinking.

Diimide generated from the hydrazine/hydrogen peroxide/catalyst system can be used to hydrogenate unsaturated polymers in latex form. As an economical and environmentally benign alternative to the commercial processes based on hydrogen/transition metal catalysts, this method is of special interest to industry. This thesis provides a detailed description of the diimide hydrogenation process. Reaction kinetics, catalysts and gel formation mechanism have been investigated. <br /> <br /> Four main reactions and a mass transfer process form three parallel processes in this system: diimide is generated at the interface of the latex particles; diimide diffuses into the organic phase to saturate carbon-carbon double bonds; diimide may be consumed at the interface by hydrogen peroxide, and may also be consumed by the disproportionation reaction in the organic phase. The two side reactions contribute to the low hydrogenation efficiency of hydrogen peroxide. Slowing down hydrogen peroxide addition and using stable interfacial catalysts may totally suppress the side reaction in the aqueous phase. The actual catalytic activity of metal ions in the latex depends on the hydrogen peroxide concentration and the addition procedure of reactants. Cupric ion provides better selectivity for hydrogenation than ferric ion and silver ion do. Boric acid as a promoter provides improved selectivity for hydrogenation and faster diimide generation rate. The side reaction in the rubber phase results in low efficiency and gel formation. The rate constants of the four reactions in this system are estimated. <br /> <br />It is shown that the hydrogenation of nitrile rubber latex with an average particle diameter of 72 nm is mainly a reaction-controlled process. Diimide diffusion presents limitation upon hydrogenation at high hydrogenation degree range. Antioxidants can not effectively inhibit gel formation during hydrogenation. Hydrogenation of a core-shell latex with NBR as the shell layer should be able to achieve a higher efficiency, a higher degree of hydrogenation and a lower level of crosslinking.

Doctor of Philosophy / Department of Chemistry / Daniel A. Higgins / This doctoral thesis covers the synthesis, preparation, and characterization of a series of four perylene diimide derivatives, and the nanofibrous composite materials formed by these perylene diimides when complexed with oppositely charged polyelectrolytes. The perylene diimides include a symmetric dication (TAPDI2+), a symmetric dianion (PDISO32-), and two singly charged asymmetric varieties (C11OPDI+ and C7OPDI+) that contain a hydrophilic head group and hydrophobic ether tail. For all studies presented in the following chapters, poly(acrylate) (PA-) or poly(diallyldimethylammonium) chloride (PDDA+) are used as the polyelectrolytes (PEs). The patterned deposition of sheer aligned, nanofibrous material within a fluidic device is conclusively demonstrated. Thin films of the nanofibrous composite are prepared from aqueous solutions of the semiconducting perylene diimides and oppositely charged polyelectrolyte precursors. By sequentially exposing a clean glass substrate to the cationic and anionic precursor solutions, a thin film of composite material is deposited in a layer-by-layer fashion. By utilizing electrostatic self-assembly (ESA) and layer-by-layer (LbL) procedures, precise control of film thickness and optical density are obtained. The effect of perylene diimide structure and charge on resultant composite film morphology is explored. Through spectroscopic and microscopic studies of bulk perylene diimide solutions and composite thin films, it was determined that the formation of these fibrous materials is dependent on the aggregation of the PDI within the precursor solutions. The molecular orientation of the perylene diimide within the composite nanofiber was determined to be perpendicular to the fiber long axis. For the special case of C7OPDI+/PA- composite, flow induced fiber alignment was observed for both dip coated and flow coated samples. The influence of solution flow profile, PE molecular weight (MW), and PDI structure on deposition efficiency, macroscopic and microscopic morphology, and the potential for nanofiber alignment are investigated. Film formation mechanisms involving two unique routes are also presented.

La gestion des sources renouvelables est probablement l'un des enjeux majeurs du 21ème siècle. La part croissante de ces ressources intermittentes et fluctuantes telles que les énergies solaires, éoliennes et marines connectées au réseau électrique requiert des systèmes de stockage efficaces pour sécuriser et réguler l'approvisionnement électrique. L'objectif principal de cette thèse est donc la création de batteries aqueuses écologiques et durables à base de matériaux organiques à faible coût. En particulier, ce projet avait pour but d’identifier des stratégies pour synthétiser, comprendre et modifier des matériaux redox idoines pour en optimiser les réactions électrochimiques et chimiques. De plus, cette technologie a nécessité une mise en oeuvre particulière de ces matériaux mettant en jeu des électrodes millimétriques jamais réalisées à ce jour. Une nouvelle famille de molécules redox de type p/n a été identifiée. Leur comportement électrochimique, rationalisés par de nombreuses caractérisations physiques, a mis en évidence l’échange simultané de cations et d’anions ce qui n’a jamais été montré dans le domaine des batteries. En outre ce matériau permet une cyclabilité remarquable notamment dans l’eau de mer. La synthèse et le comportement électrochimique de différents dérivés du TEMPO en tant que matériaux actifs d'électrode positive ont également été évalués. Sur la base de ces découvertes des résultats très encourageants ont été obtenus avec les batteries aqueuses organiques complètes composées d'électrodes millimétriques. / The management of renewable sources is probably one of the major issues of the 21st century. The increasing share of these intermittent and fluctuating sources such as solar, wind and marine energies connected to the electrical grid pushes towards the need for efficient storage systems to secure and regulate the supply of electricity. The main target of this thesis is therefore the creation of a low cost and sustainable full-organic aqueous cell. In particular, this project consisted in identifying strategies for synthesizing, understanding and modifying various organic redox materials to optimize their electrochemical and chemical behavior. In addition, the economic viability of this (new) technology required a particular implementation of organic materials according to industrially scalable processes, in millimeter thick electrodes ever made to date. As a result, a new p-/n-type redox active molecule and its electrochemical behavior in aqueous electrolyte has been presented. Further improvements have been achieved by modifying the previous compound into an oligomeric p-/n-type assembly which shows remarkable performance as cutting-edge negative electrode active material. This is the first redox material in the field of batteries able to exchange both anions and cations simultaneously. Extended cycling has been obtained in various electrolytes, including ocean water. The synthesis and the electrochemical behavior of different TEMPO derivatives as possible positive electrode active materials have been also evaluated. Finally, very encouraging results have been obtained by assembling full organic aqueous batteries composed of millimeter thick electrodes.

Les travaux décris dans cette thèse rapportent la conception de Metal-Organic Frameworks (MOFs) photoactifs et leur immobilisation sur surface dans le but d’obtenir et d’étudier des SurMOFs (Surface anchored Metal-Organic Frameworks) propices aux processus photoinduits dans le cadre de la photosynthèse artificielle. Pour accomplir cela, nous avons synthétisé différents ligands photoactifs et réalisé leur immobilisation sur surface à l’aide de la croissance épitaxiale en phase liquide. Ainsi, différents SurMOFs à base de zinc(II), présentant tous une structure de type SurMOF-2, ont été préparés avec succès. Les premiers matériaux obtenus à base de ligands rylènes (naphtalène dimide : NDI et pérylène diimide : PDI) ont mis en avant de fortes interactions  entre les chromophores au sein du SURMOF, causant une perte de la luminescence. Une deuxième génération de ligands plus encombrés a été synthétisée. Ils ont conduit à des SurMOFs luminescents et siège de transferts d’énergie interligands. Ces premiers travaux ont mis en avant l’impact de la disposition des ligands dans le matériau sur les propriétés photoniques. Par ailleurs, des SurMOFs constitués de ligands dicétopyrrolopyrrole (DPP) et d’anthracène (ADP) ont été synthétisés. L’étude de leurs propriétés photoniques alliée à des calculs théoriques ont montré que le transfert d’énergie au sein de ce SurMOF ne se fait pas de manière isotrope. Enfin, un SurMOF à partir de ligand DPP portant des fonctions réactives (azoture) a été synthétisé et nous avons pu greffer différentes molécules par réaction de cyclo-addition de type Huisgen, dont un accepteur d’électron, à sa périphérie par modification post-synthétique. / The aim of this thesis was the development of photoactive Metal-Organic Frameworks (MOFs) and their immobilizations on surface to obtain and study SurMOFs (Surface anchored Metal-Organic Frameworks) to investigate photoinduced processes in the context of the artificial photosynthesis. Towards this goal, we have synthesized photoactive ligands and immobilized them on surfaces using liquid phase epitaxy (LPE) in a layer-by-layer (LbL) fashion. Thus, different zinc (II) based SurMOFs, featuring a SurMOF-2 structure, were successfully prepared. The first rylene- (naphthalene diimide: NDI and perylene diimide: PDI) based SurMOFs described in this thesis showed strong  interactions between the chromophores within the MOF, causing the quenching of the luminescence. A second generation of ligands, sterically hindered, was then synthesized. They lead to luminescent SurMOFs showing efficient ligand-to-ligand energy transfer. These first results highlight the impact of linker arrangement within the material on its photonic properties. Furthermore, diketopyrrolopyrrole (DPP) and anthracene (DPA) based SurMOFs were prepared. The study of their photonic properties coupled with theoretical calculations showed that energy transfers, occurring within SurMOF-2 type materials, were not isotropic. Finally, a SurMOF, made out of a DPP ligand bearing reactive moieties (azide), was synthesized and was functionalized with different kinds of molecules, including an electron acceptor, at the periphery by post-synthetic modification using the Huisgen cycloaddtion reaction.

This doctoral dissertation described herein will be comprised of two parts. The first portion will address our efforts towards the synthesis of [alpha]-amino carbonyls from silyl enol ethers and the second portion will describe our unrelated efforts towards the synthesis of proaporphine alkaloids. A full discussion of the relevant literature, experiments and development of the methodologies will be provided along with all relevant experimental data. Part I: The [alpha]-amino carbonyl moiety has great potential for being a very useful synthetic intermediate for the incorporation of nitrogen owing to the synthetic utility and versatility of the carbonyl functional group. Despite this potential the synthesis has long been problematic owing to their tendency to undergo condensation reactions. We aimed to synthesize them utilizing a protected carbonyl in the form of a triisopropylsilyl enol ether and an electrophilic nitrogen source that could incorporate the nitrogen via an ene-[2,3] sigmatropic reaction sequence. To this end we used an N-sulfinyl carbamate as an electrophilic source of nitrogen that could be utilized for a regiospecific allylic amination of alkenes or could be used to form a highly reactive sulfur diimide that could be used for the allylic amination of alkenes or silyl enol ethers. Part II: Many pharmacologically important and synthetically interesting alkaloids have been formed in nature by the o,p oxidative phenolic coupling of various benzyl-tetrahydroisoquinoline alkaloids. One major class of alkaloids derived from this generalized oxidation is the proaporphine alkaloids and they possess an acid labile spirocyclic-dienone system obtained from this coupling. These compounds have great potential for being used for their anesthetic properties. Despite the relative ease of synthesizing the benzylisoquinoline alkaloids the application of the biomimetic oxidative coupling to make the quaternary center of these compounds gives very poor yields. We opted to form this spiro-dienone system by using a two step Suzuki coupling-para phenolate alkylation methodology that had been used to synthesize the related alkaloids codeine and narwedeine. In doing this we opted to extend the practical application of this methodology by the displacement of an alcohol derived leaving group. / text

Chemistry / Although molecules that bind DNA have the potential to modify gene expression, the reality of targeting DNA in a sequence-specific manner is still a problematic but worthwhile goal. The Iverson lab has been exploring DNA recognition through a motif known as threading polyintercalation based on connecting intercalating naphthalene diimide (NDI) units, which are molecules that insert themselves between DNA base pairs, together with peptide linkers. These polyintercalators interact with both DNA grooves by “threading” or winding through the DNA, like a snake might climb a ladder. Initially, two different bisintercalator modules with altered sequence specificities and different groove binding topologies were discovered and used to inspire the design of a hybrid NDI tetraintercalator. Surprisingly enough, this tetraintercalator bound sequence-specifically with a dissociation half-life of 16 days to its preferred 14 bp site, a record at the time it was reported for a synthetic DNA-binding molecule. The work reported here expands on the capabilities of this modular threading polyintercalation motif. Chapter 2 describes the ability of a new hybrid NDI tetraintercalator, where the bisintercalator modules are connected together in a different way compared to the previously studied tetraintercalator, to subtly discriminate between similar binding sites. Chapter 3 offers a structural understanding, through NMR analysis, for the sequence recognition abilities of this new tetraintercalator. Chapter 4 analyzes the binding abilities of an un-optimized NDI octaintercalator and proposes how to approach the second-generation design of longer polyintercalators. Chapter 5 describes the optimization of the originally designed NDI tetraintercalator by serially lengthening one of the linkers to produce a tetraintercalator with a 57 day dissociation half-life from its 14 bp sequence, a new record for a synthetic DNA-binding molecule. Using the optimized linker in the context of an NDI hexaintercalator allows for binding to a 22 bp designed site, a record for a synthetic non-nucleic acid molecule. Chapter 6 recounts a focused library screening to search for bisintercalators with new sequence specificities. These efforts have laid the groundwork to progress toward studies aimed at understanding how these molecules might function to prevent transcription in a sequence-dependent manner in vivo. / text

Le contrôle de la morphologie de la couche active en optoélectronique organique représente un objectif majeur du fait de son impact sur la stabilité et les performances des dispositifs. En particulier, le degré d'autoorganisation d'un mélange de deux composés à caractère donneur (D) et accepteur (A) d’électrons, ainsi que leurs orientations sont déterminants pour obtenir à la fois un de transfert de charges efficace et des chemins de percolation continus jusqu'aux électrodes. Durant ce travail de thèse, nous avons synthétisé plusieurs séries de co-oligomères à blocs donneur-accepteur capables de s’auto-organiser pour former des lamelles alternées D/A à longue distance. Les co-oligomères présentent une architecture moléculaire de type diade (DA) ou triade (DAD ou ADA), et sont constitués d’une longueur de bloc D variable. Les molécules sont toutes composées d'un bloc A à base de perylène diimide et d'un bloc D contenant les motifs thiophène, fluorène et benzothiadiazole. Une attention particulière a été portée sur l'étude des propriétés optiques, électrochimiques, photophysiques, structurales ou encore opto-électroniques de nos matériaux. En particulier, nous nous avons montré que l’organisation lamellaire était très fortement dépendante de l’architecture moléculaire, puisque seuls les systèmes AD et ADA conduisent à une structuration à longue distance. Par ailleurs, en ajustant la densité électronique au sein du bloc D, nous avons montré qu’il était possible de contrôler à la fois le temps de formation et la durée de vie des états à transfert de charges. Enfin,les premiers résultats de caractérisation du transport de charges et des propriétés photovoltaïques démontrent l’intérêt de ces matériaux dans la réalisation de dispositifs photovoltaïques organiques mono-composants. / In the field of organic opto-electronics, the good control of the active layer morphology in devices represents a major objective to improve the stability and the photovoltaic performances. Especially when blends of selforganizing electron donor (D) and acceptor (A) moieties are combined, their mutual orientation and the degree of supramolecular ordering are determinant in controlling the fundamental energy, the electron transfer processes and the existence of continuous percolation pathways for charge carriers. In this work, we have designed and synthesized different series of donor-acceptor block co-oligomers able toself-assemble in a lamellar structure at very long range. The co-oligomers are made of a dyad (AD) or triad (DAD, or ADA) molecular architecture, and have a variable length of the D block. The A block is constituted of a perylene diimide unit, and the D block of benzothiadiazole, thiophene and fluorene segments. A particular attention was paid on the studies of optical, electrochemical, photophysical, structural and opto-electronical properties. In particular, we showed that the lamellar organization was strongly dependent on the molecular architecture, since only the AD and ADA systems lead to long-range organization. Moreover, by tuning the electronic density along the D block, it has been possible to control both the formation and lifetime of the charge transfer states. Finally, the first results on charge transport and photovoltaic properties demonstrate the high interest of these materials for the elaboration of single component organic photovoltaic devices.