Fused glass beads as a sample preparation method for X-ray Fluorescence spectroscopy (XRF) were introduced in 1957 by Claisse; it soon became the preferred method to introduce oxide samples to the spectrometer, because heterogeneity, mineralogical and particle size effects are eliminated during the fusion process. Matrix effects are largely reduced by the resulting dilution. With the recent advances in XRF spectrometers, instruments with enhanced generator and temperature stability, improved sensitivity (even for light elements), and effective matrix correction software are available. Consequently, the largest proportion of analytical error results from the sample preparation step. Sampling error will always contribute the largest overall error but that is not the topic of this discussion. After more than 50 years of fused bead use in XRF analysis, certain matrices remain problematic. Although many fusion methods for chromite-, sulphide- and cassiterite-rich materials have been published, easily reproduced, routine methods for these still elude analytical chemists. Lengthy fusions at temperatures higher than 1100ºC are often prescribed for refractory materials and ores, and until recently one of the biggest challenges was a metal-bearing sample e.g. contained in slags or certain refractory materials. This study was conducted to identify and elucidate the reactions occurring in the formation of a lithium borate glass, but also between the lithium borate and oxides during glass formation. Different analytical techniques were used to investigate the reactions occurring during the fusion process based on theoretical glass-making principles. As a starting point, Thermo Gravimetric Analysis (TGA) and Differential Thermal Analysis (DTA) were used jointly to evaluate the reactions occurring during the fusion of lithium borate glasses, and at a later stage, oxide/flux mixtures. When a different TGA instrument was used, Differential Scanning Calorimetry (DSC) was used in conjunction with the TGA. Observed reactions were modelled in a muffle furnace to produce identical material in larger quantities, and this material was then investigated using X-ray Powder Diffractometry (XRD), Raman Spectroscopy and Electron Microprobe Analysis (EPMA). The most enlightening result from the TGA/DSC results was the large mass loss above 1050 ºC. Literature often prescribes prolonged fusions at elevated temperatures for certain fusions, but it was proved beyond reasonable doubt that this practise causes volatilisation of the flux and leads to erroneous analytical results. The next analytical technique applied to the flux and flux/oxide samples was XRD. Where pre-fused fluxes were investigated, the XRD data served as confirmation of the glassy state of the pre-fused flux as a broad humpy scan indicative of an amorphous material was seen in stead of a diffractogram with sharp, well defined peaks. After heating to above the temperature of re-crystallisation, the phases present could be identified from the diffractogram. Provisional results using the in-situ, high temperature stage point towards the possibility of using this technique to great effect to investigate the presence of different phases formed at high temperatures. Flux-oxide mixtures were measured on the high temperature stage and after cooling a new phase was observed indicating that new phases formed during a fusion reaction. As the heating stage is slow-cooled, the chance of crystallisation in the glass is good, providing the possibility for investigating this formation of new phases at elevated temperatures further with a more suitable heating element that will contain the material. Raman spectroscopy was subsequently used to gain information about the bonds within the flux. Pure lithium tetraborate and lithium metaborate fluxes were analysed as well as flux oxide mixtures. The vibrations could not be predicted from first principles as band broadening occurs in glasses that makes theoretical predictions very difficult. The data obtained was compared to similar studies in literature and good agreement was found. In oxide-flux mixtures definite new bands were observed that was not part of the flux or oxide spectrum. EPMA results allowed calculation of the maximum solubilities of an oxide in a specific flux. It was done using Cr2O3 and ZrO2 and compared well with experimental values obtained from literature. The microscope images revealed some new insights into the theory of XRF fusions. It could clearly be seen that dissociation of the minerals in the sample occurred, thus proving that no mineralogical effects exist in a fused glass bead, and it could be observed that the flux oxide mixture devitrify when over saturated. / Dissertation (MSc)--University of Pretoria, 2010. / Chemistry / unrestricted

Unfolded protein response (UPR) is a complex cellular mechanism induced upon ER stress caused by various environmental factors. Single spanning signal transducers of UPR were reported to recognise also lipid-induced ER stress. Studies of these transducers, namely PERK and IRE1 uncovered that they can sense change in membrane properties and activate themselves by clustering. Moreover, signal transducer IRE1 retained ability to sense changes in the membrane properties with TMD exchanged for a polyLeu α-helix. It was thus unclear what mechanism drives lipid-induced UPR via IRE1. We employed model membrane system in form of LUVs, where properties of membranes can be readily altered by specific lipid composition. As a simplified model of the UPR signal transducers in the ER, synthetic transmembrane peptides with polyLeu core were used. Dynamic light scattering (DLS) has been used for qualitative and semi-quantitative analysis of LUVs. Clustering of synthetic peptides was determined by time resolved anisotropy of fluorescence. DLS results demonstrate successful formation of vesicles with a desired size in all planned composition. On the contrary to the studies in living cells, the presence of cholesterol or palmitic acid in model membranes did not induce the aggregation of transmembrane peptides....

Thermal instability in the toxin catalytic subunit may be a common property of toxins that exit the endoplasmic reticulum (ER) by exploiting the mechanism of ER-associated degradation (ERAD). The Haemophilus ducreyi cytolethal distending toxin (HdCDT) does not utilize ERAD to exit the ER, so we predicted the structural properties of its catalytic subunit (HdCdtB) would differ from other ER-translocating toxins. Here, we document the heat-stable properties of HdCdtB which distinguish it from other ER-translocating toxins. Cell-based assays further suggested that HdCdtB does not unfold before exiting the ER and that it may move directly from the ER lumen to the nucleoplasm. These observations suggest a novel mode of ER exit for HdCdtB.

As one of the natural polyphenols, resveratrol possesses hydroxyl substituted trans-stilbene structure and exerts impact on health by inhibiting multiple human enzymes, such as cyclooxygenase, F1 ATPase, and tyrosinase. Resveratrol has to be bound by human serum albumin (HSA) to keep a high concentration in serum, since its solubility is low in water. To improve water solubility and bioavailability, two resveratrol aliphatic acids and their esters have been designed and synthesized. The solubilities of the resveratrol and its derivatives have been measured using a standard procedure. The two aliphatic acids showed better solubilities in pure water and phosphate buffer (pH 7). The binding affinities of resveratrol derivatives for HSA were also measured, and the drug-protein interaction mechanism was investigated using fluorescence, UV-vis, and NMR spectroscopies. Interestingly, resveratrol hexanoic acid (5) was found to be a much better ligand (Ka = (6.70 ± 0.10) × 106 M-1) for HSA than resveratrol (Ka = (1.64 ± 0.07) × 105 M-1), and there was 41-fold improvement for the binding affinity. It was the first time that the increase of fluorescence of resveratrol moiety was observed during the binding to HSA, suggesting that 5 should be bound tightly by HSA. The UV-vis absorption spectroscopy revealed a maximum absorption shift from 318 to 311 nm with decreasing intensity by 20% upon complexation, suggesting that the π-π conjugation of the stilbene structure was impaired during the binding. Although HSA was reported to have only one binding site for resveratrol, the Job's and molar ratio plots suggested that HSA should bind two molecules of 5. NMR study suggested that phenyl group (B ring) in the center of the molecule of 5 should be involved in the π-π stacking interactions with HSA aromatic amino acid residues. Molecular geometry calculation of 5 with Spartan software showed that the stilbene structure had two conformers, orthogonal and planar ones. The former (E = -1.432 KJ/mol) was more stable than the latter (E = -0.128 KJ/mol), suggesting that the former should be the conformer of 5 in the complexation with HSA.

Human RPA (replication protein A), a single-stranded DNA-binding protein, is required for many cellular pathways including DNA repair, recombination and replication. However, the role of RPA in nucleotide excision repair remains elusive. In the present study, we have systematically examined the binding of RPA to a battery of well-defined ssDNA (single-stranded DNA) substrates using fluorescence spectroscopy. These substrates contain adducts of (6-4) photoproducts, N-acetyl-2-aminofluorene-, 1-amino-pyrene-, BPDE (benzo[a]pyrene diol epoxide)- and fluorescein that are different in many aspects such as molecular structure and size, DNA disruption mode (e.g. base stacking or non-stacking), as well as chemical properties. Our results showed that RPA has a lower binding affinity for damaged ssDNA than for non-damaged ssDNA and that the affinity of RPA for damaged ssDNA depends on the type of adduct. Interestingly, the bulkier lesions have a greater effect. With a fluorescent base-stacking bulky adduct, (+)-cis-anti-BPDE-dG, we demonstrated that, on binding of RPA. the fluorescence of BPDE-ssDNA was significantly enhanced by up to 8-9-fold. This indicated that the stacking between the BPDE adduct and its neighbouring ssDNA bases had been disrupted and there was a lack of substantial direct contacts between the protein residues and the lesion itself. For RPA interaction with short damaged ssDNA, we propose that, on RPA binding, the modified base of ssDNA is looped out from the surface of the protein, permitting proper contacts of RPA with the remaining unmodified bases.

Influence of the preparing of a biopolymer-surfactant system on its solubilization properties and stability was investigated by using fluorescence spectroscopy and dynamic light scattering methods. Investigation was made on complex of native hyaluronan with cationic surfactant cetyltrimethylammonium bromide (CTAB). System has been studied in aqueous and in saline solutions. The effect of temperature of stock solutions and freezing effect on subsequent properties were investigated. Further was examinated, what effect has a way of introducing fluorescent probe into the system on subsequent solubilization properties. It was found that the conditions of preparing of biopolymer-surfactant system have a significant effect on the solubilization properies and stability of complex.

京都大学 / 0048 / 新制・課程博士 / 博士(工学) / 甲第18587号 / 工博第3948号 / 新制||工||1607(附属図書館) / 31487 / 京都大学大学院工学研究科機械理工学専攻 / (主査)教授 北條 正樹, 教授 北村 隆行, 教授 琵琶 志朗 / 学位規則第4条第1項該当 / Doctor of Philosophy (Engineering) / Kyoto University / DFAM

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