Gap crossing is a regular locomotor activity for arboreal animals. The distance between branches likely plays a role in determining whether an animal is capable of crossing a given gap, and what locomotor behavior it uses to do so. Yet, despite the importance of gap distance as a physical parameter influencing gap crossing behavior, the precise relationships between gap distance and movement kinematics have been explored in only a very small number of species. One particularly interesting group of arboreal inhabitants are the flying snakes (Chrysopelea). This species is able to use a dynamic "J-loop" movement to launch its glides, but it is not known whether it is also capable of using such jumps to cross smaller gaps between tree branches. This dissertation addresses this knowledge gap, and investigates the influence of gap distance on crossing behavior and kinematics in three closely-related species of snake: Chrysopelea paradisi, a species of flying snake, and two species from the sister genus, Dendrelaphis, neither of which can glide. Chapter 2 is a literature review of the biomechanics of gap crossing, specifically focusing on the role played by gap distance, and establishes the context for the rest of the work. Chapter 3 presents a detailed study of how increasing gap size influences the behavior and kinematics of gap crossing in C. paradisi, showing that this species uses increasingly dynamic movements to cross gaps of increasing size. Chapter 4 explores the same relationships between gap size and kinematics in D. punctulatus and D. calligastra, revealing remarkable similarities between the three species, suggesting the possibility that dynamic gap crossing may have evolved prior to gliding in this clade. Finally, chapter 5 addresses the role played by gap distance in limiting the non-dynamic, cantilever movements used by these species to cross small gaps, comparing observed stopping distances to those predicted by various torque-related limitations. / Doctor of Philosophy / To successfully cross a gap, an animal must be able to reach or jump from one side to the other. Animals who live in trees must do this quite frequently, as they live among the branches and there are often not connected paths from one place to another. But we don't know very much about how the distance between two structures (the "gap distance") affects the ways an animal moves between them. In this dissertation, I explore how gap distance changes the way a few special species of snakes cross a gap. The species I am studying are special because one species, the paradise tree snake, can glide. Because this 'flying' snake launches its glides by doing a big jump, it is possible that the snake can also jump between tree branches, but this question has never been examined before. We also don't know how the ability to do big jumps evolved, so I studied how distance affects the way two very closely related species of snake, the common tree snake and the northern tree snake, cross gaps. By looking at all of these species, we can understand more about what kinds of behavior are specific to the flying snakes, and which are present in related species. Finally, I also explore how gap distance limits the way the snakes cross gaps when they are not jumping. When the snakes do not jump, they have to hold themselves out straight off the end of a branch. This requires a lot of muscular effort, which means they can't go as far. The fact that the non-jumping behavior is distance-limited might help explain why the snakes need to jump. Altogether, the projects in this study help us understand how gap distance influences what behavior an animal chooses to cross the gap, and increases our knowledge of how flying snakes and their relatives cross gaps in particular.

Habitat loss and fragmentation occur at unprecedented rates, especially in tropical countries where human activities have deforested or degraded around 80% of tropical rainforests. Tropical forest fragmentation is considered the main cause of extinction of tropical forest avifauna, yet the mechanisms by which fragmentation affects bird populations are poorly understood. The present study investigates the pattern of bird species distribution in a fragmented landscape in tropical southeastern Mexico and the relation of bird community and species distribution patterns to landscape and fragment characteristics. Area and isolation of forest fragments were the main determinant of species richness and abundance in fragments, especially for forest-dependent species. The significant effect of isolation on species persistence in forest fragments suggests that limitation of dispersal is one potential mechanism by which fragmentation affects species distribution in the landscape. To understand how fragmentation can affect bird dispersal in a fragmented landscape, the effect of open areas and corridors on movement patterns of forest birds was investigated. The evidence presented in this study supports the idea that bird movement is restricted by open areas, especially for forest-restricted birds. Forested corridors had a positive effect on movement rates of forest birds, potentially acting to preserve movement and dispersal processes, and ultimately species persistence, in heavily fragmented landscapes.

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This study investigated bird distributions in relation to local habitat and landscape pattern and the implications which habitat fragmentation may have for woodland birds. There were two sections to the research: an experimental study investigating bird gap crossing behaviour across distances of five to 120m; and an observational study modelling woodland bird distributions in relation to local habitat and landscape scale variables in two study areas (East Loch Lomond and the Central Scotland Forest). In the experimental study it was hypothesised that bird willingness to cross gaps will decrease with increasing gap distance even at home-range scales and that the rate of decline will vary interspecifically in relation to bird morphology. Song thrush mobbing calls played at woodland edges in the West of Scotland were used to attract birds across gaps and results were compared with the response along woodland edges. Data were obtained for four species: chaffinch, coal tit, robin and goldcrest. The decline in response with distance across gaps and along woodland edge was modelled for each species using generalized linear modelling. Maximum gap crossing distances ranged from 46m (goldcrest) to 150m (extrapolated value for the chaffinch). Goldcrests responded more readily through woodlands. There was no difference between woodland edge and gap response for the coal tit. Robins and chaffinches however responded more readily across gaps than through woodland. When different response indices were plotted against bird mass and wing area, results suggested that larger birds with bigger wings responded more readily across gaps than through woodland. It is suggested that this relates to differences in bird manoeuvrability within woodlands and ability to evade a predator in gaps. Fragmentation indices were calculated for an area of the Central Scotland Forest to show how willingness to cross different gap distances influences perception of how fragmented the woodlands are in a region. Results are discussed in the context of the creation of Forest Habitat Networks. The data for the observational section of the work was from bird point counts for 200 sample points at East Loch Lomond in 1998 and 2000 and 267 sample points in the Central Scotland Forest in 1999. In addition a time series of point count data was available for 30 sample points at East Loch Lomond. Additional data was gathered for ten sample points (1998) and two sample points (2000) at East Loch Lomond to investigate effects of observer, time and weather on count data. Generalized linear and generalized additive modelling was carried out on these additional data. Results indicated that biases due to the variation in time and weather conditions between counts existed in the pure count data but that these were eliminated by reducing data to presence and absence form for analysis. Species accumulation curves indicated that two counts per sample point were insufficient to determine species richness. However a sufficiently large proportion of the species was being detected consistently in two counts of ten minutes duration for it to be valid to model them in relation to habitat and landscape variables. Point count data for East Loch Lomond in 1998 (ELL98) and the Central Scotland Forest in 1999 (CSF99) for the wren, treecreeper, garden warbler, robin, blue tit, blackbird, willow warbler, coal tit, goldcrest, great tit, and song thrush were analysed using generalized additive modelling. In addition models were built for the blackcap (CSF99) and the siskin, redstart and wood warbler (ELL98). Where all relationships were identified as linear, models were rebuilt as GLMs. Models were evaluated using the Area Under the Curve (AUC) of Receiver Operating Characteristic (ROC) plots. AUC values ranged from 0.84-0.99 for ELL98 and from 0.76-0.93 for CSF99 indicating high predictive accuracy. Habitat variables accounted for the largest proportion of explained variation in all models and could be interpreted in terms of bird nesting and feeding behaviour. However additional variation was explained by landscape scale and fragmentation related (especially edge) variables. ELL98 models were used to predict bird distributions for Loch Lomond in 2000 (ELL00) and for the CSF99. Likewise the CSF99 models were used to predict distributions for ELL98 and ELL00. Predicted distributions had useful application in many cases within the ELL site between years. Fewer cases of useful application arose for predicting distributions between sites. Results are discussed in the context of the generality of bird environment relationships and reasons for low predictive accuracy when models are applied between sites and years. Models which had useful application for ELL00 were used to predict bird distributions for 2025 and 2050 at East Loch Lomond. Habitat and landscape changes were projected based on the proposed management for the site. Since woodland regeneration rates are difficult to predict, two scenarios were modelled, one assuming a modest amount of regeneration and one assuming no regeneration. Predictions derived from the ELL98 models showed broad-leaved species increasing in distribution while coniferous species declined. This was in keeping with the expected changes in the relative extent of broad-leaved and coniferous habitat. However, predictions from the CSF99 models were often less readily explicable. The value of the modelling approach is discussed and suggestions are made for further study to improve confidence in the predictions.