Breeding of coniferous trees in the Czech Republic is undergoing an important development during last decades, especially thanks to molecular-genetic methods, which refine and simplify mapping of tree genotypes and the selection of superior genotypes. Recently, in the Czech Republic superior genotypes are selected based on forestry parameters (tree height, trunk diameter, and timber quality) what does not always correlate with the ability of a tree to resist abiotic and biotic stresses. Recently, there is an effort to include in the breeding also physiological parameters and select superior genotypes using nonspecific stress indicators, which are able to correspond better to tree fitness than the forestry growth parameters. The present thesis deals with genotypes of Scots pine (Pinus sylvestris L.) growing in seed orchards Doubrava and Silov in the Pilsen region in the Czech Republic. Seed orchards are tree plantations, which serve as a reserve of the genetically valuable reproduction material, they are parts of breeding programs. Pine needles were collected in July 2015 and analyzed for non-specific stress indicators - photosynthetic pigments, phenolics, lignin, cellulose and proline contents and leaf reflectance and fast chlorophyll fluorescence measurements. First objective of the present thesis...

Title Identifying of genetic predisposition affecting sports performance focusing on anaerobic activity of skeletal muscle activity Problem Inborn predispositions of every individual are mainly influenced by the inherited genetic information in their DNA with the addition of external environmental factors. Based on the high variability of the inborn predictions in the form of phenotypic differences in the anatomy or physiology of an individual, it can be deduced on the connection between genetics and a specific sport talent. According to current scientific knowledge, anaerobic performance of the skeletal muscle tissue seems to be more genetically influenced. Anatomic and functional properties of the skeletal muscle are mainly influenced by genes, which have effect on the muscle fibre structure, blood storage, metabolism, neurotransmission, and muscle regeneration, etc. Fencing is a complex sport discipline where predispositions to speed and dynamic force play a key role. The sport performance in fencing, regardless of the type of weapon, is directly dependent on the interactions between the reaction of the fencer to the surrounding stimuli (visual, tactile), accuracy, tactical and technical skills, level of anticipation and overall physical a psychological readiness of the fencer. This work is...

Title Identifying of genetic predisposition affecting sports performance focusing on anaerobic activity of skeletal muscle activity Problem Inborn predispositions of every individual are mainly influenced by the inherited genetic information in their DNA with the addition of external environmental factors. Based on the high variability of the inborn predictions in the form of phenotypic differences in the anatomy or physiology of an individual, it can be deduced on the connection between genetics and a specific sport talent. According to current scientific knowledge, anaerobic performance of the skeletal muscle tissue seems to be more genetically influenced. Anatomic and functional properties of the skeletal muscle are mainly influenced by genes, which have effect on the muscle fibre structure, blood storage, metabolism, neurotransmission, and muscle regeneration, etc. Fencing is a complex sport discipline where predispositions to speed and dynamic force play a key role. The sport performance in fencing, regardless of the type of weapon, is directly dependent on the interactions between the reaction of the fencer to the surrounding stimuli (visual, tactile), accuracy, tactical and technical skills, level of anticipation and overall physical a psychological readiness of the fencer. This work is...

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Text in English / Potato is an important source of energy to most micronutrient malnourished affected population in South Africa. Improvements through bio-fortification can therefore enhance access to essential micronutrients. The study was aimed at determining the level of variability of iron and zinc concentration among 20 potato genotypes as a preliminary step for future breeding program. The materials were evaluated using inductively coupled plasma optical emission spectrometry. Statistical analysis indicated significant (P<0.001) variation of Fe and Zn among the genotypes. The average concentration ranges from 34.67 to 76.67 mg kg-1 and 12.88 to 66.1 mg kg-1 for iron and zinc respectively. The best performing genotypes were cultivar Mnandi, Hertha, Buffelspoort and breeding lines-N105-1, 00-S100-33 and 03-627-50. Iron concentration was positively correlated with Zinc concentration. The study showed that enough variability of Fe and Zn concentration exist among the evaluated genotypes, which can be exploited for use in potato bio-fortification breeding programme. / Agriculture, Animal Health and Human Ecology / M.Sc. (Agriculture)

Thesis (PhD (Viticulture and Oenology. Wine Biotechnology))--Stellenbosch University, 2008. / Although bananas are widely grown worldwide in many tropical and a few subtropical countries, banana beverages are still among the fruit beverages processed by use of rudimentary methods such as the use of feet or/and spear grass to extract juice. Because banana juice and beer remained on a home made basis, there is a research drive to come up with modern technologies to more effectively process bananas and to make acceptable banana juices and wines. One of the main hindrances in the production of highly desirable beverages is the pectinaceous nature of the banana fruit, which makes juice extraction and clarification very difficult. Commercial enzyme applications seem to be the major way forward in solving processing problems in order to improve banana juice and wine quality. The particular pectinolytic enzymes that were selected for this study are Rapidase CB, Rapidase TF, Rapidase X-press and OE-Lallzyme. In addition this study, investigate the applicability of recombinant yeast strains with pectinolytic, xylanolytic, glucanolytic and amylolytic activities in degrading the banana polysaccharides (pectin, xylan, glucan starch) for juice and wine extraction and product clarification. The overall objective of this research was to improve banana juice and wine by enzymatic processing techniques and to improve alcoholic fermentation and to produce limpid and shelf-stable products of clarified juice and wine. The focus was on applying the selected commercial enzyme preparations specifically for the production of better clarified banana juice and wine. This is because the turbid banana juice and beer, which contain suspended solids that are characterised by a very intense banana flavour, require a holistic approach to address challenges and opportunities in order to process pure banana beverages with desirable organoleptic qualities. The specific objectives of applying commercial enzymes in the processing of banana juice and wine, comparing with grape winemaking practices, use of recombinant yeast and analyses of various parameters in the juices and wines made have enabled generation of information that could be of help to prospective banana juice and wine processors. The research findings obtained could be used to establish a pilot plant or small-scale industry in the banana processing beverages producing large quantities,and finally the overall objective of obtaining limpid and shelf stable products would be achieved.

This work is part of a project focused on the study of the variability of human cytomegalovirus (HCMV) among clinical isolates with the aim to map the geographical distribution of HCMV genotypes, reveal the relationships between genotypes and the severity of HCMV-associated diseases, and identify regions in the HCMV genome with a potential for use as diagnostic and therapeutic targets. Attention was paid to the development of the methodology for the preparation of the material for next-generation sequencing (NGS) from HCMV clinical isolates and evaluation of the obtained sequencing data. Blood and urine samples collected from hematopoietic stem cell transplantat recipients and congenitally infected children were analyzed. Samples suitable for NGS were sequenced by the Illumina platform and sequences were created by de novo assembly followed by mapping assembly. Urine samples in comparison to blood samples had higher yield of material for NGS. Of the samples positive for HCMV DNA (7 of 50) after amplification in the cell cultures, only one sample had high purity of the viral DNA (98%) while six samples had purity of less than 7%. The sample containing 98% of the viral DNA was fully sequenced and the sequence was compared to the sequences of other clinical isolates from Belgium in 11 polymorphic...

Plant-soil feedback is an important mechanism in plant communities affecting their species composition. Understanding plant-soil feedback is crucial for describing the interactions between plant communities and their soil communities. The effects of plant-soil feedback can be positive, negative or neutral and because of these changes plants are either coexisting or competing. Plant-soil feedback is often studied within plant succession, plant invasion and plant dominance in a plant community. In these cases, the nature and strength of influence of each species is studied. Despite the large number of previous studies on plant-soil feedback, very little is known about the temporal and spatial changes of the intensity of plant-soil feedback and the intraspecific variability in plant-soil feedback. The aim of my work was to observe the temporal changes in the plant-soil feedback of a species growing in soil which was conditioned by the same or other plant species. Another goal was to explore spatial changes in plant-soil feedback. The last objective was to test differences in the intensity of plant-soil feedback among different genotypes of one species. The results of my work demonstrated that the intensity of intraspecific plant-soil feedback of Rorippa austriaca is negative and increases with...

Brassinosteroids (BRs) have been recognized to alleviate damages caused by drought stress and to enhance tolerance to water deficit. Soaking of maize kernels before the sowing in solution with different 24-epibrassinolide concentrations (especially the 10-8 M) had a positive effect on growth of plants before and after the stress period, although it did not affected relative water content and photosynthetic parameters. After the recovery under optimal conditions there were no differences among the treatments. When compared to spraying, soaking of maize kernels was not proved to have any advantages, though its positive effect on plants germination under water deficit conditions could be possible. Based on the results of the second season experiment it is not possible to deduce the role of exogenous BRs application (spraying with 24-epibrassinolide) or endogenous BRs biosynthesis (spraying with biosynthesis inhibitor - brassinazole) in maize plants subjected to water deficit. However, decrease in relative water content in contrast to chlorophylls content increase during the days following after drought stress onset in both cultivars (contrastive in drought sensitivity) challenges for further investigation of this problem. Understanding the role of BRs in plant drought tolerance and resistance is...

O nematóide das lesões Pratylenchus coffeae é um dos principais parasitos do cafeeiro e de outras culturas e sua variabilidade biológica, que dificulta a adoção de métodos de controle, contribui para aumentar a sua importância no Brasil. Pela importância da cafeicultura e a falta de estudos com esse nematóide no Brasil, foram realizados experimentos com dois de seus isolados (K5 e M2), com os objetivos de correlacionar densidades populacionais do nematóide aos danos causados e estabelecer possíveis fontes de resistência de cafeeiros ao isolado K5. Foram testadas diferentes densidades populacionais iniciais do isolado M2 em plantas (seis pares de folhas) e plântulas (dois pares de folhas) do cafeeiro arábico ‘Catuaí Vermelho’. As densidades populacionais utilizadas foram de 0, 333, 1.000, 3.000 e 9.000 nematóides por plântula ou planta. A avaliação ocorreu aproximadamente cinco (plântulas) e sete (plantas) meses após a inoculação. Os resultados mostraram que houve uma acentuada redução do crescimento das plântulas, bem como massa fresca das raízes e massa seca da parte aérea, já a partir das densidades mais baixas. A variação populacional (Pf/Pi) foi menor que um (1,0) para todas as densidades de inóculo, indicando que esta cultivar, no estágio de plântulas com dois pares de folhas, mostrou-se intolerante ao parasitismo. Em relação à inoculação das plantas, já com seis pares de folhas, não houve diferenças significativas nas variáveis analisadas e ocorreram decréscimos populacionais do nematóide, indicando que, nessas condições, ‘Catuaí Vermelho’ mostrou-se resistente ao isolado M2. Em relação ao isolado K5, foram realizados cinco experimentos, visando caracterizar as reações de genótipos de Coffea canephora ('Robusta' e 'Conilon'), além de C. arabica ‘Mundo Novo’, comparado às reações frente ao nematóide de galhas Meloidogyne incognita raça 2. No Experimento 1, foram utilizadas plantas de C. arabica ‘Mundo Novo’, inoculadas com 1.480 nematóides por planta (isolado K5 e M. incognita). Após sete meses da inoculação foi feita a avaliação, mostrando que o crescimento populacional dos nematóides foi alto e a reação de suscetibilidade. Mesmo em mudas desenvolvidas de cafeeiro ‘Mundo Novo’, o isolado K5 destacou-se como tão agressivo quanto M. incognita. Os outros genótipos testados, de C. canephora, foram inoculados com 3.000 nematóides por planta. Nos Experimentos 2 e 3, as linhagens IAC 4804 e IAC 4810 de ‘Robusta’ foram suscetíveis ao isolado K5, mas em um deles (IAC 4804) ocorreu grande variação entre as repetições em relação à M. incognita. Apenas o isolado K5 promoveu redução do crescimento do cafeeiro, evidenciado na variável massa fresca das raízes, em ambas as linhagens, sendo que IAC 4810 comportou-se como resistente a M. incognita. No caso de C. canephora ‘Conilon’, ambas as linhagens testadas (IAC 4764 e IAC 4765) foram resistentes ao isolado K5 e suscetíveis a M. incognita. / The lesion-nematode Pratylenchus coffeae is a major pest of coffee and other economic crops and its biological variability, which often makes difficult the adoption of control methods, contributes to increase the importance of this parasite in Brazil. Due to the importance of coffee production and the lack of studies involving this nematode species in Brazil, experiments were set with two of its available isolates (K5 and M2) to correlate initial population densities with the damage caused on coffee plants and to establish possible resistance sources in relation to the isolate K5. Different population densities of isolate M2 were tested in plants (six pairs of leaves) and seedlings (two pairs of leaves) of Coffea arabica ‘Catuaí Vermelho’. The population densities (Pi) were: 0, 333, 1.000, 3.000 and 9.000 nematodes per seedling or plant. The evaluation was done at approximately five (seedlings) and seven (plants) months after inoculation. The results showed that there was a marked reduction of the height, as well as root fresh weight and shoot dry weight of the seedlings, starting from the lower Pi values. The nematode population decreased (Pf/Pi < 1), indicating that this cultivar, at the seedling stage, was intolerant to parasitism. In relation to the inoculation of older plants, there were no significant differences in the growth parameters and the nematode population also decreased allowing ‘Catuaí Vermelho’ to be rated as resistant to the isolate M2. In relation to isolate K5, five experiments (referred to as 1, 2, 3, 4, and 5) were set to characterize the reaction of different genotypes of Coffea canephora ('Robusta' and 'Conilon') and C. arabica ‘Mundo Novo', as compared with their reaction to the root-knot nematode Meloidogyne incognita race 2. In Experiment 1, plants of C. arabica ‘Mundo Novo’ were inoculated with 1,480 nematodes per plant (K5 and M. incognita). The final evaluation after seven months of the inoculation showed a high populational increase of the nematodes and that both were pathogenic at a same extent. The other genotypes tested, belonging to C. canephora, were inoculated with 3,000 nematodes per plant. The genotypes (IAC 4804 and IAC 4810) of ‘Robusta’ were susceptible to isolate K5, but in one of them (IAC 4804) there was great variation among the repetitions in relation to M. incognita. The isolate K5 caused marked reduction in the growth of coffee Robusta plants as evidenced particularly through the root fresh weight values in both tested genotypes; in addition, IAC 4810 was rated as resistant to M. incognita. With regard to C. canephora 'Conilon', both tested genotypes (IAC 4764 and IAC 4765) were resistant to isolate K5 and susceptible to M. incognita.