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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
1

Fluctuations in mesoscopic phase-separating systems

Oltsch, Florian 14 June 2022 (has links)
For life to thrive, its fundamental units, i.e., the cells, need to reliably and robustly fulfill their function. However, cellular operability is challenged by the appearance of biological noise in the concentration of proteins and other cell components. This noise arises due to spontaneous fluctuations that are inherent to all chemical reactions. For small (mesoscopic) systems, like cells, these fluctuations can be significant and disturb cellular functions. Cells evolved mechanisms to control and reduce their internal noise. One way to reduce noise in eukaryotic cells is to exploit their internal structure and restrict noise to a particular organelle, thus reducing the noise in the rest of the cell. In recent years it was shown that many cell organelles could be formed by phase separation without the need for a membrane. Thus, it was suggested that phase separation could reduce concentration noise in cells. However, until now, any systematic investigation linking essential aspects of phase separation and concentration noise in cells has been lacking. This motivates the study of fluctuations in mesoscopic phase-separating systems. This thesis develops a generic theoretical model based on a thermodynamic description of phase separation. We consider a binary mixture that can phase separate into two phases - a liquid droplet surrounded by a phase, which we refer to as continuous phase. We merge this description with methods of stochastic chemical reactions in order to account for the active turnover of phase-separating material and, thus, for the non-equilibrium nature of living cells. The resulting framework allows us to study fluctuations due to chemical turnover and phase separation in and out of equilibrium of phase separation. We use this framework to investigate how a phase-separating system can reduce concentration noise for different reaction networks. We find that phase separation can reduce concentration noise in active mesoscopic systems like cells in both phases. When turnover dynamics are slow, concentration noise in the dilute phase can be lowered to the level of Poissonian fluctuations. For the dense phase, we find that noise can fall below the Poissonian threshold. When turnover rates become faster such that the system deviates from the equilibrium configuration, the noise reduction by phase separation becomes less efficient. We test our model on experimental data of an engineered protein expressed in living cells. We find a good agreement between the data and theory and demonstrate that phase separation is a viable mechanism for noise reduction in living cells. Thus, phase separation might play an essential part in ensuring the reliable control of cellular functions.
2

Capillary pore-size distribution and equilibrium moisture content of wood determined by means of pressure plate technique

Zauer, Mario, Meissner, Frank, Plagge, Rudolf, Wagenführ, André 23 June 2020 (has links)
This paper deals with the determination of the capillary pore-size distribution (CPSD) and equilibrium moisture content (EMC) of untreated and thermally modified (TM) Norway spruce [Picea abies (L.) Karst.] by means of the pressure plate technique (PPT). Desorption experiments were conducted at very high values of relative humidity (RH) in the range between 99.2% and 100%. The thermal modification of spruce results in an alteration of the CPSD, owing to the formation of intercellular cracks in the middle lamella, as a result of cell-wall compression. The desorption curves for both untreated and TM spruce show an extremely upward bend at 99.97% RH. This step reflects an EMC of 38.1% for untreated spruce and 33.8% for TM spruce. None of the samples shrunk during the PPT measurements. Following desorption experiments at 97.4% RH, all samples shrunk. This step reflects an EMC of 27.9% for untreated spruce and 21.7% for TM spruce.
3

Electronic Transport Properties of Copper and Gold at Atomic Scale / Elektronische Transporteigenschaften von Kupfer und Gold auf atomarer Skala

Mohammadzadeh, Saeideh 15 December 2010 (has links) (PDF)
The factors governing electronic transport properties of copper and gold atomic-size contacts are theoretically examined in the present work. A two-terminal conductor using crystalline electrodes is adopted. The non-equilibrium Green’s function combined with the density functional tight-binding method is employed via gDFTB simulation tool to calculate the transport at both equilibrium and non-equilibrium conditions. The crystalline orientation, length, and arrangement of electrodes have very weak influence on the electronic characteristics of the considered atomic wires. The wire width is found to be the most effective geometric aspect determining the number of conduction channels. The obtained conductance oscillation and linear current-voltage curves are interpreted. To analyze the conduction mechanism in detail, the transmission channels and their decomposition to the atomic orbitals are calculated in copper and gold single point contacts. The presented results offer a possible explanation for the relation between conduction and geometric structure. Furthermore, the results are in good agreement with available experimental and theoretical studies. / In der vorliegenden Arbeit werden die wesentlichen Faktoren, die die elektronischen Transporteigenschaften von Kontaktstrukturen atomarer Größe aus Kupfer bzw. Gold bestimmen, theoretisch untersucht. Untersuchungsgegenstand ist eine leitfähige Struktur zwischen zwei kristallinen Elektroden. Um Transportberechungen sowohl unter Gleichgewichts- als auch unter Nicht-Gleichgewichts-Bedingungen durchführen zu können, wird die Simulations-Software gDFTB, die auf dem Nicht-Gleichgewichts-Green-funktionenformalismus in Kombination mit der Dichtefunktional-Tight-Binding-Methode beruht, eingesetzt. Die elektronischen Eigenschaften der betrachteten atomaren Drähte werden nur sehr schwach von ihrer kristallinen Orientierung, ihrer Länge und der Elektrodenanordnung beeinflusst. Als effektivster geometrischer Faktor wurde der Leiterquerschnitt gefunden, weil dieser die Anzahl der Leitungskanäle bestimmt. Darüber hinaus werden die erhaltenen Leitfähigkeitsoszillationen und die linearen Strom-Spannungs-Kennlinien erklärt. Für eine detaillierte Analyse des Leitungsmechanismus werden bei den Ein-Atom-Kontakten aus Kupfer und Gold die Übertragungskanäle und ihre Aufspaltung in Atomorbitale betrachtet. Die präsentierten Ergebnisse bieten eine mögliche Erklärung für den Zusammenhang zwischen Leitfähigkeit und geometrischer Struktur. Die Resultate zeigen eine akzeptable Übereinstimmung mit den verfügbaren experimentellen und theoretischen Studien.
4

Electronic Transport Properties of Copper and Gold at Atomic Scale

Mohammadzadeh, Saeideh 23 November 2010 (has links)
The factors governing electronic transport properties of copper and gold atomic-size contacts are theoretically examined in the present work. A two-terminal conductor using crystalline electrodes is adopted. The non-equilibrium Green’s function combined with the density functional tight-binding method is employed via gDFTB simulation tool to calculate the transport at both equilibrium and non-equilibrium conditions. The crystalline orientation, length, and arrangement of electrodes have very weak influence on the electronic characteristics of the considered atomic wires. The wire width is found to be the most effective geometric aspect determining the number of conduction channels. The obtained conductance oscillation and linear current-voltage curves are interpreted. To analyze the conduction mechanism in detail, the transmission channels and their decomposition to the atomic orbitals are calculated in copper and gold single point contacts. The presented results offer a possible explanation for the relation between conduction and geometric structure. Furthermore, the results are in good agreement with available experimental and theoretical studies. / In der vorliegenden Arbeit werden die wesentlichen Faktoren, die die elektronischen Transporteigenschaften von Kontaktstrukturen atomarer Größe aus Kupfer bzw. Gold bestimmen, theoretisch untersucht. Untersuchungsgegenstand ist eine leitfähige Struktur zwischen zwei kristallinen Elektroden. Um Transportberechungen sowohl unter Gleichgewichts- als auch unter Nicht-Gleichgewichts-Bedingungen durchführen zu können, wird die Simulations-Software gDFTB, die auf dem Nicht-Gleichgewichts-Green-funktionenformalismus in Kombination mit der Dichtefunktional-Tight-Binding-Methode beruht, eingesetzt. Die elektronischen Eigenschaften der betrachteten atomaren Drähte werden nur sehr schwach von ihrer kristallinen Orientierung, ihrer Länge und der Elektrodenanordnung beeinflusst. Als effektivster geometrischer Faktor wurde der Leiterquerschnitt gefunden, weil dieser die Anzahl der Leitungskanäle bestimmt. Darüber hinaus werden die erhaltenen Leitfähigkeitsoszillationen und die linearen Strom-Spannungs-Kennlinien erklärt. Für eine detaillierte Analyse des Leitungsmechanismus werden bei den Ein-Atom-Kontakten aus Kupfer und Gold die Übertragungskanäle und ihre Aufspaltung in Atomorbitale betrachtet. Die präsentierten Ergebnisse bieten eine mögliche Erklärung für den Zusammenhang zwischen Leitfähigkeit und geometrischer Struktur. Die Resultate zeigen eine akzeptable Übereinstimmung mit den verfügbaren experimentellen und theoretischen Studien.

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