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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
41

Nucleosídeo trifosfato difosfohidrolase e ecto-5'-nucleotidase de Trichomonas vaginalis : metabolismo dos nucleotídeos e nucleosídeo de guanina, efeito na citotoxicidade e modulação da atividade anti-T. vaginalis de floroglucinois

Menezes, Camila Braz January 2016 (has links)
Trichomonas vaginalis é o protozoário flagelado que parasita o sistema urogenital humano causando a tricomoníase, a doença sexualmente transmissível não viral mais comum no mundo, sendo registrados aproximadamente 276 milhões de novos casos a cada ano. O sucesso da colonização das células hospedeiras e desenvolvimento da infecção envolve um complexo processo que culmina em citoaderência e citotoxicidade. Nucleotídeos e nucleosídeos são liberados para o espaço extracelular por células em situações de estresse ou lesão tecidual e desencadeiam seus efeitos sinalizadores através da ativação de purinoceptores. Ainda, a hidrólise sequencial de nucleotídeos pelas ectonucleotidases, nucleosídeo trifosfato difosfoidrolase (NTPDase) e ecto-5’-nucleotidase leva à formação de nucleosídeos que são essenciais para o metabolismo de purinas do parasito. Efeitos antagônicos são desencadeados por nucleotídeos e nucleosídeos, respectivamente próinflamatórios e anti-inflamatórios, na mediação de respostas imunes. A atividade dessas enzimas sobre os nucleotídeos da guanina e o efeito de restrição metabólica sobre a hidrólise de nucleotídeos foi avaliada. Além disso, a participação da sinalização mediada pelos nucleotídeos e nucleosídeos também foi avaliada em um modelo de citotoxicidade. Os resultados demonstram que os nucleotídeos GTP, GDP e GMP são substratos para as ectonucleotidases de T. vaginalis com parâmetros cinéticos compatíveis para enzimas dessa família. A condição de restrição de soro aumentou a atividade da NTPDase e da ecto-5’-nucleotidase e o aumento da expressão gênica das TvNTPDase 2 e 4 pode justificar o aumento da atividade. A recaptação de guanosina extracelular foi menor do que a recaptação de adenosina, demonstrada pela razão isotópica C12/C13 no nucleosídeo detectada no DNA dos parasitos. A fim de investigar um possível papel biológico para o acúmulo de guanosina extracelular, bem como avaliar o envolvimento da sinalização purinérgica na citotoxicidade mediada pelo parasito, diferentes isolados de T. vaginalis foram testados frente à capacidade de promover citólise. Todos os isolados foram capazes de promover efeito citolítico em alguma proporção, com destaque para o isolado TV-LACM6, que apresenta um perfil de hidrólise ATP, GTP > AMP > GMP. Quando nucleotídeos e nucleosídeos foram testados, o efeito citotóxico produzido pelo isolado foi potencializado na presença de ATP e GTP. Por outro lado, o efeito foi revertido na presença de eritro-9-(2-hidroxi-3-nonil) adenina (EHNA), um inibidor da adenosina deaminase. Importante, guanosina não foi capaz de reverter o efeito citotóxico produzido pelos trofozoítos, resultado que corrobora com o perfil de hidrólise de nucleotídeos e acúmulo de guanosina exracelular, sendo uma vantagem para o parasito. A possível participação dos receptores de adenosina foi avaliada, entretando os receptores ADORA1 e ADORA2A não parecem estar envolvidos no efeito protetor mediado pela adenosina. Considerando o potencial farmacológico desempenhado por essas enzimas no metabolismo de purinas em protozoários bem como no controle de respostas imunes, a modulação da hidrólise de nucleotídeos pode ser um alvo terapêutico importante e representar um mecanismo sinérgico na atividade antiparasiária de compostos ativos. Nesse sentido, o estudo demonstrou a atividade anti-T. vaginalis de três compostos, e em especial o isoaustrobrasilol B, com IC50 de 38 μM. O composto não apresentou efeitos hemolíticos frente a eritrócitos humanos e apesar de ter demonstrado efeito citotóxico in vitro frente à linhagem de células epiteliais vaginais humanas (HMVII), nenhuma citotoxicidade foi demonstrada no modelo in vivo. Isoaustrobrasilol B foi o único composto que inibiu significativamente as atividades da NTPDase e ecto-5’-nucleotidase e o efeito imune atribuído ao acúmulo extracelular de nucleotídeos foi avaliado. A produção de espécies reativas de oxigênio e interelucina-6 (IL-6) por neutrófilos estimulados por T.vaginalis não foi afetada pelo tratamento com o composto. Por outro lado, a liberação de interleucina-8 (IL-8), a principal interleucina produzida por neutrófilos na tricomoníase, foi aumentada. O efeito sinérgico de redução de viabilidade de trofozoítos e modulação da NTPDase e ecto-5’-nucleotidase pode aumentar a suscetibilidade do T. vaginalis frente à resposta imune do hospedeiro e consequentemente, sua eliminação do sítio de infecção. / Trichomonas vaginalis is a flagellate protozoan that parasitizes the human urogenital tract causing trichomoniasis, the most common non-viral sexually transmitted disease, infecting approximately 276 million people worldwide annually. To achieve success in parasitism trichomonads develop a complex process against the host cells that culminate in cytoadherence and cytotoxicity. Nucleotides and nucleosides are released into the extracellular space by cells under stress or injury and they exert their signaling effects through activation of the purinoceptors. Moreover, the ectonucleotidases, nucleoside triphosphate diphosphohydrolase (NTPDase) and ecto-5'-nucleotidase, are capable of hydrolyzing the nucleotides producing nucleosides that are essential to the parasite purine metabolism. The enzymatic cascade mediated by ectonucleotidases is relevant in controlling nucleotides and nucleosides levels as these molecules play antagonistic roles in inflammation, as proinflamatory and anti-inflammatory mediators, respectively. This study investigated the hydrolysis profile of guanine nucleotides in T. vaginalis as the effect of serum limitation condition in the enzymatic cascade. Furthermore, we investigated the influence of extracellular nucleotides and nucleosides on the modulation of the host cell cytotoxicity mediated by T. vaginalis. Results show that guanine nucleotides GTP, GDP, GMP are substrates for T. vaginalis ectonucleotidases, with expected kinetic parameters for this enzyme family. The metabolic restriction condition enhanced NTPDase and ecto-5’-nucleotidase activities and the highest gene expressions found for TvNTPDase 2 and 4 which may explain the enzymatic activity enhance. The extracellular guanosine uptake was lower than that observed for adenosine into parasite DNA measured by isotopic ratio C12/C13 of the nucleosides. In order to investigate the possible biological role for extracellular guanosine accumulation as well as to evaluate the involvment of purinergic signaling in the citotoxicity promoted by the parasite, a collection of T. vaginalis isolates were tested against a human epithelial vaginal cell line (HMVII). Fresh clinical T. vaginalis isolates produced cytolytic effect against human vaginal epithelial cells in a heterogeneous profile. The most cytotoxic isolate, TV-LACM6, presents the hydrolysis profile ATP, GTP > AMP > GMP. When the nucleotides and nucleosides were tested, the cytotoxic effect elicited by TV-LACM6 was increased in presence of nucleotides ATP and GTP. In contrast, the cytotoxicity was reversed by adenosine in presence of erythro-9-(2-hydroxy-3-nonyl) adenine (EHNA), but not by guanosine, which is in agreement with the accumulation of extracellular guanosine and the hydrolysis profile, acting as an advantage for the parasite. ADORA1 and ADORA2A are not involved in the protective mechanism of adenosine. Considering the pharmacological potential that ectonucleotidases play in the context of purine metabolism and in the imune response modulation, nucleotide hydrolysis may represent a therapeutic target as an additional mechanism in association with anti T.vaginalis compounds. The study demonstrated promissing activities for three derivatvies with isoaustrobrasilol B the most activity compound with IC50 38 μM. The compound did not demonstrate any hemolytic activity and although induced cytotoxicity against human epithelial vaginal cells (HMVII), absence of toxicity was obtained when in vivo model was studied. Isoaustrobrasilol B was the only compound that significantly inhibited NTPDase and ecto-5’-nucleotidase activities and the immune modulation attributed to extracellular nucleotide accumulation was evaluated. Reactive oxygen species production and interleukin-6 (IL-6) release by T.vaginalis stimulated neutrophils were not affected by phloroglucinol treatment. On the other hand, interleukin-8 (IL-8), the primarily cytokine produced by neutrophils during trichomoniasis, was significantly enhanced. The associative mechanism of trophozoites death and NTPDase and ecto-5’-nucleotidase modulation may increase the susceptibility of T. vaginalis to host immune responses and, consequently, the elimination from the infection site.
42

Nucleosídeo trifosfato difosfohidrolase e ecto-5'-nucleotidase de Trichomonas vaginalis : metabolismo dos nucleotídeos e nucleosídeo de guanina, efeito na citotoxicidade e modulação da atividade anti-T. vaginalis de floroglucinois

Menezes, Camila Braz January 2016 (has links)
Trichomonas vaginalis é o protozoário flagelado que parasita o sistema urogenital humano causando a tricomoníase, a doença sexualmente transmissível não viral mais comum no mundo, sendo registrados aproximadamente 276 milhões de novos casos a cada ano. O sucesso da colonização das células hospedeiras e desenvolvimento da infecção envolve um complexo processo que culmina em citoaderência e citotoxicidade. Nucleotídeos e nucleosídeos são liberados para o espaço extracelular por células em situações de estresse ou lesão tecidual e desencadeiam seus efeitos sinalizadores através da ativação de purinoceptores. Ainda, a hidrólise sequencial de nucleotídeos pelas ectonucleotidases, nucleosídeo trifosfato difosfoidrolase (NTPDase) e ecto-5’-nucleotidase leva à formação de nucleosídeos que são essenciais para o metabolismo de purinas do parasito. Efeitos antagônicos são desencadeados por nucleotídeos e nucleosídeos, respectivamente próinflamatórios e anti-inflamatórios, na mediação de respostas imunes. A atividade dessas enzimas sobre os nucleotídeos da guanina e o efeito de restrição metabólica sobre a hidrólise de nucleotídeos foi avaliada. Além disso, a participação da sinalização mediada pelos nucleotídeos e nucleosídeos também foi avaliada em um modelo de citotoxicidade. Os resultados demonstram que os nucleotídeos GTP, GDP e GMP são substratos para as ectonucleotidases de T. vaginalis com parâmetros cinéticos compatíveis para enzimas dessa família. A condição de restrição de soro aumentou a atividade da NTPDase e da ecto-5’-nucleotidase e o aumento da expressão gênica das TvNTPDase 2 e 4 pode justificar o aumento da atividade. A recaptação de guanosina extracelular foi menor do que a recaptação de adenosina, demonstrada pela razão isotópica C12/C13 no nucleosídeo detectada no DNA dos parasitos. A fim de investigar um possível papel biológico para o acúmulo de guanosina extracelular, bem como avaliar o envolvimento da sinalização purinérgica na citotoxicidade mediada pelo parasito, diferentes isolados de T. vaginalis foram testados frente à capacidade de promover citólise. Todos os isolados foram capazes de promover efeito citolítico em alguma proporção, com destaque para o isolado TV-LACM6, que apresenta um perfil de hidrólise ATP, GTP > AMP > GMP. Quando nucleotídeos e nucleosídeos foram testados, o efeito citotóxico produzido pelo isolado foi potencializado na presença de ATP e GTP. Por outro lado, o efeito foi revertido na presença de eritro-9-(2-hidroxi-3-nonil) adenina (EHNA), um inibidor da adenosina deaminase. Importante, guanosina não foi capaz de reverter o efeito citotóxico produzido pelos trofozoítos, resultado que corrobora com o perfil de hidrólise de nucleotídeos e acúmulo de guanosina exracelular, sendo uma vantagem para o parasito. A possível participação dos receptores de adenosina foi avaliada, entretando os receptores ADORA1 e ADORA2A não parecem estar envolvidos no efeito protetor mediado pela adenosina. Considerando o potencial farmacológico desempenhado por essas enzimas no metabolismo de purinas em protozoários bem como no controle de respostas imunes, a modulação da hidrólise de nucleotídeos pode ser um alvo terapêutico importante e representar um mecanismo sinérgico na atividade antiparasiária de compostos ativos. Nesse sentido, o estudo demonstrou a atividade anti-T. vaginalis de três compostos, e em especial o isoaustrobrasilol B, com IC50 de 38 μM. O composto não apresentou efeitos hemolíticos frente a eritrócitos humanos e apesar de ter demonstrado efeito citotóxico in vitro frente à linhagem de células epiteliais vaginais humanas (HMVII), nenhuma citotoxicidade foi demonstrada no modelo in vivo. Isoaustrobrasilol B foi o único composto que inibiu significativamente as atividades da NTPDase e ecto-5’-nucleotidase e o efeito imune atribuído ao acúmulo extracelular de nucleotídeos foi avaliado. A produção de espécies reativas de oxigênio e interelucina-6 (IL-6) por neutrófilos estimulados por T.vaginalis não foi afetada pelo tratamento com o composto. Por outro lado, a liberação de interleucina-8 (IL-8), a principal interleucina produzida por neutrófilos na tricomoníase, foi aumentada. O efeito sinérgico de redução de viabilidade de trofozoítos e modulação da NTPDase e ecto-5’-nucleotidase pode aumentar a suscetibilidade do T. vaginalis frente à resposta imune do hospedeiro e consequentemente, sua eliminação do sítio de infecção. / Trichomonas vaginalis is a flagellate protozoan that parasitizes the human urogenital tract causing trichomoniasis, the most common non-viral sexually transmitted disease, infecting approximately 276 million people worldwide annually. To achieve success in parasitism trichomonads develop a complex process against the host cells that culminate in cytoadherence and cytotoxicity. Nucleotides and nucleosides are released into the extracellular space by cells under stress or injury and they exert their signaling effects through activation of the purinoceptors. Moreover, the ectonucleotidases, nucleoside triphosphate diphosphohydrolase (NTPDase) and ecto-5'-nucleotidase, are capable of hydrolyzing the nucleotides producing nucleosides that are essential to the parasite purine metabolism. The enzymatic cascade mediated by ectonucleotidases is relevant in controlling nucleotides and nucleosides levels as these molecules play antagonistic roles in inflammation, as proinflamatory and anti-inflammatory mediators, respectively. This study investigated the hydrolysis profile of guanine nucleotides in T. vaginalis as the effect of serum limitation condition in the enzymatic cascade. Furthermore, we investigated the influence of extracellular nucleotides and nucleosides on the modulation of the host cell cytotoxicity mediated by T. vaginalis. Results show that guanine nucleotides GTP, GDP, GMP are substrates for T. vaginalis ectonucleotidases, with expected kinetic parameters for this enzyme family. The metabolic restriction condition enhanced NTPDase and ecto-5’-nucleotidase activities and the highest gene expressions found for TvNTPDase 2 and 4 which may explain the enzymatic activity enhance. The extracellular guanosine uptake was lower than that observed for adenosine into parasite DNA measured by isotopic ratio C12/C13 of the nucleosides. In order to investigate the possible biological role for extracellular guanosine accumulation as well as to evaluate the involvment of purinergic signaling in the citotoxicity promoted by the parasite, a collection of T. vaginalis isolates were tested against a human epithelial vaginal cell line (HMVII). Fresh clinical T. vaginalis isolates produced cytolytic effect against human vaginal epithelial cells in a heterogeneous profile. The most cytotoxic isolate, TV-LACM6, presents the hydrolysis profile ATP, GTP > AMP > GMP. When the nucleotides and nucleosides were tested, the cytotoxic effect elicited by TV-LACM6 was increased in presence of nucleotides ATP and GTP. In contrast, the cytotoxicity was reversed by adenosine in presence of erythro-9-(2-hydroxy-3-nonyl) adenine (EHNA), but not by guanosine, which is in agreement with the accumulation of extracellular guanosine and the hydrolysis profile, acting as an advantage for the parasite. ADORA1 and ADORA2A are not involved in the protective mechanism of adenosine. Considering the pharmacological potential that ectonucleotidases play in the context of purine metabolism and in the imune response modulation, nucleotide hydrolysis may represent a therapeutic target as an additional mechanism in association with anti T.vaginalis compounds. The study demonstrated promissing activities for three derivatvies with isoaustrobrasilol B the most activity compound with IC50 38 μM. The compound did not demonstrate any hemolytic activity and although induced cytotoxicity against human epithelial vaginal cells (HMVII), absence of toxicity was obtained when in vivo model was studied. Isoaustrobrasilol B was the only compound that significantly inhibited NTPDase and ecto-5’-nucleotidase activities and the immune modulation attributed to extracellular nucleotide accumulation was evaluated. Reactive oxygen species production and interleukin-6 (IL-6) release by T.vaginalis stimulated neutrophils were not affected by phloroglucinol treatment. On the other hand, interleukin-8 (IL-8), the primarily cytokine produced by neutrophils during trichomoniasis, was significantly enhanced. The associative mechanism of trophozoites death and NTPDase and ecto-5’-nucleotidase modulation may increase the susceptibility of T. vaginalis to host immune responses and, consequently, the elimination from the infection site.
43

Efeitos da guanosina sobre a captação de glutamato em retinas de ratos Wistar submetidos a um modelo experimental de isquemia e reperfusão ocular

Bellini, Luciano Porto January 2012 (has links)
Objetivos: Desenvolver um modelo de isquemia e reperfusão (I-R) ocular baseado no aumento da pressão intraocular (PIO) em ratos Wistar, e utilizar este modelo para investigar o efeito da guanosina (GUA) na captação de glutamato (GLU) nas retinas destes ratos em condições de I-R. Métodos: Desenvolvemos um modelo de I-R ocular e utilizamos este modelo para investigar 30 ratos Wistar, divididos em 3 grupos de 10 animais. Em cada rato, o olho direito foi submetido à elevação da PIO, gerando isquemia retiniana por 45 minutos, sem nenhuma intervenção no olho esquerdo (controle). No grupo 1, os animais não receberam GUA. No grupo 2, os animais receberam injeção intraperitoneal de GUA 30 minutos antes da isquemia e, no grupo 3, os animais receberam GUA na água durante 1 semana antes e 1 semana após a isquemia. Todos os animais foram mortos 7 dias após a isquemia e suas retinas foram coletadas para quantificar a captação de GLU. Resultados: As captações de GLU nas retinas controle foram semelhantes em todos os grupos. No grupo 1, a captação de GLU foi reduzida pela I-R. Esta redução foi abolida pela GUA administrada na água (grupo 3) e, no grupo 2, a captação de GLU aumentou com a administração intraperitoneal de GUA (P<0.001; ANOVA). Conclusões: Estes resultados sugerem que a I-R ocular gerada em nosso modelo experimental diminuiu a captação de GLU nas retinas de ratos Wistar e que a GUA aboliu tal redução ou, até mesmo, aumentou a captação de GLU. Este efeito da GUA está de acordo com estudos prévios que revelaram comportamento neuroprotetor da GUA no sistema nervoso central, por estimular a captação de GLU por astrócitos. Na retina, este efeito pode ser devido à ação da GUA estimulando a captação de GLU pelas células de Müller. / Purpose: To devise an experimental model of ocular ischemia-reperfusion (I-R) based on intraocular pressure (IOP) elevation in Wistar rats, and use this model to investigate the effect of guanosine (GUA) on glutamate (GLU) uptake in retinas of Wistar rats submitted to such ocular I-R injuries. Methods: We devised an experimental model of ocular I-R and applied this model to investigate 30 Wistar rats, divided in 3 groups of 10 rats. Each rat was submitted to IOP elevation in the right eye generating retinal ischemia during 45 minutes with no intervention in the left eye (control retina). In group 1, animals did not receive any GUA. In group 2, animals received an intraperitoneal injection of GUA 30 minutes before ischemia and, in group 3, animals received GUA in water during 1 week before and 1 week after ischemia. All animals were killed 7 days after ischemia and retina samples were obtained. Glutamate uptakes were performed from these retina samples. Results: GLU uptake in control retina was similar in all groups. In group 1, GLU uptake was significantly reduced by I-R; this reduction was abolished by GUA administration in water (group 3) and GLU uptake increased with intraperitoneal GUA (group 2).(P<0.001; ANOVA) Conclusions: These results point that I-R generated by our experimental model decreased GLU uptake in retinas of Wistar rats and that GUA abolished or even overcomed this decrease. These GUA effects are in agreement to previous results, which show that GUA administration presents neuroprotection in central nervous system by stimulating GLU uptake, mainly by astrocytes. In retina, this effect may be due to GUA stimulation of GLU uptake exerted mainly by Müller cells.
44

Efeitos da guanosina sobre a captação de glutamato em retinas de ratos Wistar submetidos a um modelo experimental de isquemia e reperfusão ocular

Bellini, Luciano Porto January 2012 (has links)
Objetivos: Desenvolver um modelo de isquemia e reperfusão (I-R) ocular baseado no aumento da pressão intraocular (PIO) em ratos Wistar, e utilizar este modelo para investigar o efeito da guanosina (GUA) na captação de glutamato (GLU) nas retinas destes ratos em condições de I-R. Métodos: Desenvolvemos um modelo de I-R ocular e utilizamos este modelo para investigar 30 ratos Wistar, divididos em 3 grupos de 10 animais. Em cada rato, o olho direito foi submetido à elevação da PIO, gerando isquemia retiniana por 45 minutos, sem nenhuma intervenção no olho esquerdo (controle). No grupo 1, os animais não receberam GUA. No grupo 2, os animais receberam injeção intraperitoneal de GUA 30 minutos antes da isquemia e, no grupo 3, os animais receberam GUA na água durante 1 semana antes e 1 semana após a isquemia. Todos os animais foram mortos 7 dias após a isquemia e suas retinas foram coletadas para quantificar a captação de GLU. Resultados: As captações de GLU nas retinas controle foram semelhantes em todos os grupos. No grupo 1, a captação de GLU foi reduzida pela I-R. Esta redução foi abolida pela GUA administrada na água (grupo 3) e, no grupo 2, a captação de GLU aumentou com a administração intraperitoneal de GUA (P<0.001; ANOVA). Conclusões: Estes resultados sugerem que a I-R ocular gerada em nosso modelo experimental diminuiu a captação de GLU nas retinas de ratos Wistar e que a GUA aboliu tal redução ou, até mesmo, aumentou a captação de GLU. Este efeito da GUA está de acordo com estudos prévios que revelaram comportamento neuroprotetor da GUA no sistema nervoso central, por estimular a captação de GLU por astrócitos. Na retina, este efeito pode ser devido à ação da GUA estimulando a captação de GLU pelas células de Müller. / Purpose: To devise an experimental model of ocular ischemia-reperfusion (I-R) based on intraocular pressure (IOP) elevation in Wistar rats, and use this model to investigate the effect of guanosine (GUA) on glutamate (GLU) uptake in retinas of Wistar rats submitted to such ocular I-R injuries. Methods: We devised an experimental model of ocular I-R and applied this model to investigate 30 Wistar rats, divided in 3 groups of 10 rats. Each rat was submitted to IOP elevation in the right eye generating retinal ischemia during 45 minutes with no intervention in the left eye (control retina). In group 1, animals did not receive any GUA. In group 2, animals received an intraperitoneal injection of GUA 30 minutes before ischemia and, in group 3, animals received GUA in water during 1 week before and 1 week after ischemia. All animals were killed 7 days after ischemia and retina samples were obtained. Glutamate uptakes were performed from these retina samples. Results: GLU uptake in control retina was similar in all groups. In group 1, GLU uptake was significantly reduced by I-R; this reduction was abolished by GUA administration in water (group 3) and GLU uptake increased with intraperitoneal GUA (group 2).(P<0.001; ANOVA) Conclusions: These results point that I-R generated by our experimental model decreased GLU uptake in retinas of Wistar rats and that GUA abolished or even overcomed this decrease. These GUA effects are in agreement to previous results, which show that GUA administration presents neuroprotection in central nervous system by stimulating GLU uptake, mainly by astrocytes. In retina, this effect may be due to GUA stimulation of GLU uptake exerted mainly by Müller cells.
45

Studies towards a general method for attachment of a nuclear import signal. Stabilization of the m3G-Cap.

Lindvall, Mattias January 2010 (has links)
A synthetic pathway towards the cap-structure of 2,2,7-trimethylguanosine containing a methylene modified triphosphate bridge have been investigated. The modification to the triphosphate bridge is hoped to slow down cap degradation and give the connected  oligunucleotide an increased lifetime. This could result in an better understanding of nuclear transport of oligonucleotides and could thereby helping to develop new treatments for different diseases. The synthesis relies on a coupling reaction between the 2,2,7-trimethylguanosine 5’phosphate and 2’-O-methyladenosine with a 5’-pyrophosphate where the central oxygen has been replaced by a methylene group. The reaction pathway consists of 9 steps of which 8 steps have been successfully performed. The last step, which includes a coupling reaction, was attempted but without successful identification and isolation of the cap-structure, and will need further attention. The reaction has been performed in a milligram scale with various yields. / Presentation utförd
46

Allosteric Regulation Of Proteins In The Cyclic GMP Signal Transduction Pathway

Biswas, Kabir Hassan 05 1900 (has links) (PDF)
No description available.
47

A Laser Raman spectroscopic study of the pH induced structural changes in Guanosine-5’ monophosphate and its derivatives

Pambi, Daniel 01 December 1988 (has links)
The purpose of this study was to determine the protonation sites in guanosine-5'-monophosphate (5'-GMP), and to correlate the ease of protonation with the chemical nature and composition of substituent groups. The laser Raman spectra of 5'-GMP, 7-methyl-guanosine-5'-monophosphate (m7-GMP), and 8-bromoguanosine-5'-monophosphate (8-Br-GMP) at various pH and pD values were recorded with a Spex Ramalog-6 spectrometer. Based on the spectral changes observed in these studies, the preferred order of protonation sites for 5'-GMP and 8-Br-GMP is N7, 06 and N3. In the case of m7-GMP, the preferred sites are 06 and N3. The opening of the imidazole ring in m7-GMP is observed at pH value of about 9.4. It appears that the presence of the methyl group has a stabilizing effect on the protonated (keto) species. As expected, the vibrational modes of the phosphate group are unaffected by substituents on the guanine part of 5'-GMP. The complete spectra and vibrational assignments for 5'-GMP, m7- GMP and 8-Br-GMP are presented in this thesis.
48

Leaving Ligand Effects on Reactivity and Solubility of Monofunctional Platinum(II) Anticancer Complexes

Millay, Heidi Linn Hruska 01 October 2019 (has links)
Monofunctional platinum(II) complexes, such as phenanthriplatin and pyriplatin, have notably different characteristics from the bifunctional anticancer complexes, such as cisplatin and oxaliplatin, which have detrimental toxicities and resistance associated with them. The unique properties of the monofunctional complexes may be exploited to target cancer cells without producing the toxic side effects associated with the current FDA-approved platinum-based anticancer drugs. To advance the understanding of these monofunctional platinum(II) complexes, this study replaced the chloride leaving ligand with an acetate group, which should increase solubility and alter the rate of reactivity with key amino acid and nucleotide targets. Phenanthriplatin and pyriplatin compounds were reacted with silver acetate to form insoluble silver chloride and the desired complex. Proton nuclear magnetic resonance (1H NMR) spectroscopy was used to characterize the new complexes and conduct kinetic assays with guanosine 5'-monophosphate (5’-GMP). A rate constant of 2.9 (± 0.7) x 10-2 M-1s-1 was determined for the reaction between pyriplatin and 5’-GMP, previously. A preliminary rate constant of 1.8 (± 0.1) x 10-2 M-1s-1 was determined for the newly synthesized cis-[Pt(NH3)2(py)OAc]+ complex with 5’-GMP. Ligand exchange kinetics directly influences the anticancer activity and toxicity of platinum drugs. Initial results indicate that the solubility is increased, and the rate of reaction is decreased by the acetate ligand.
49

Elucidation of the Signal Transduction Pathways Activated by the Plant Natriuretic Peptide AtPNP-A

Turek, Ilona 11 1900 (has links)
Plant natriuretic peptides (PNPs) comprise a novel class of hormones that share some sequence similarity in the active site with their animal analogues that function as regulators of salt and water balance. A PNP present in Arabidopsis thaliana (AtPNP-A) has been assigned a role in abiotic and biotic stress responses, and the recombinant protein has been demonstrated to elicit cyclic guanosine monophosphate (cGMP)-dependent stomatal guard cell opening, regulate ion movements, and induce osmoticum-dependent water uptake. Although the importance of the hormone in maintaining ion and fluid homeostasis has been established, key components of the AtPNP-A-dependent signal transduction pathway remain unknown. Since identification of the binding partners of AtPNP-A, including its receptor(s), is fundamental to understanding the mode of its action at the molecular level, comprehensive protein-protein interaction studies, involving yeast two-hybrid screening, affinity-based assays, protein cross-linking and co-immunoprecipitation followed by mass spectrometric (MS) analyses have been performed. Several candidate binding partners of AtPNP-A identified with at least two independent methods were subsequently expressed as recombinant proteins, purified, and the specificity of their interactions with the recombinant AtPNP-A was verified using surface plasmon resonance. Several specific binary interactants of AtPNP-A were subjected to functional assays aimed at unraveling the consequences of the interactions in planta. These experiments have revealed that reactive oxygen species (ROS) are novel secondary messengers involved in the transduction of AtPNP-A signal in suspension-cultured cells of A. thaliana (Col-0). Further insight into the AtPNP-A dependent signalling events occurring in suspension-cultured cells in ROS-dependent or ROS-independent manner have been obtained from the large-scale proteomics study employing tandem mass tag (TMT) labelling followed by MS analysis to identify and relatively quantify proteins that are differentially expressed upon the treatment with nano- and picomolar concentrations of the biologically active AtPNP-A peptide at different time-points post-treatment. Characterization of both the AtPNP-A interactome and AtPNP-A dependent proteome afforded novel insights into the signal transduction pathways altered by PNPs and shed new light on the mechanisms by which these candidate interactants operate. Taken together, indications are that PNP dependent mechanisms can be harnessed for possible biotechnological applications.
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Optimization of the heterologous expression of folate metabolic enzymes of Plasmodium falciparum

Goolab, Shivani 30 March 2011 (has links)
Malaria is a fatal tropical disease affecting billions of people in impoverished countries world-wide. An alarming fact is that a child in Africa dies of malaria every 30 seconds that amounts to 2500 children per day (www.who.int/features/factfiles). Malaria is caused by the intraerythrocytic forms of Plasmodium species, notably P. falciparum, P. vivax, P. ovale and P. malariae (Hyde 2007). The spread of drug-resistant strains, failure of vector control programs, rapid growth rate of the parasite, and lack of a vaccine have further exacerbated the effects of malaria on economic development and human health. It is therefore imperative that novel drug targets are developed or current antimalarial drugs optimized (Foley and Tilley 1998). One such target is folate biosynthesis, given that folates and their derivatives are required for the survival of organisms (Muller et al. 2009). DHFR and DHPS are currently the only folate targets exploited however, their antifolate drugs are almost useless against parasite resistant strains. As such, guanosine-5’triphosphate cyclohydrolase I (GTPCHl) among other antifolate candidates are considered for intervention (Lee et al. 2001). Knock-out studies (of P. falciparum gtpchI) resulted in the suppression of DHPS activity (Nzila et al. 2005). Additionally, gtpchI amplified 11-fold in P. falciparum strains resistant to antifolates due to mutations in dhps and dhfr and this may be a mechanism for the compensation of reduced flux of folate intermediates (Kidgell et al. 2006; Nair et al. 2008). Over-expression of P. falciparum proteins in E. coli remains a challenge mainly due to the A+T rich Plasmodium genome resulting in a codon bias. This results in the expression of recombinant proteins as insoluble proteins sequestered in inclusion bodies (Carrio and Villaverde 2002; Mehlin et al. 2006; Birkholtz et al. 2008a). Comparative expression studies were conducted of native GTPCHI (nGTPCHI), codon optimized GTPCHI (oGTPCHI) and codon harmonized (hGTPCHI) in various E. coli cell lines, using alternative media compositions and co-expression with Pfhsp70. The nGTPCHI protein did not express because the gene consisted of codons rarely used by E. coli (codon bias). The expression levels of purified hGTPCHI were a greater in comparison to oGTPCHI using the different expression conditions. This is because codon-harmonization involves substituting codons to replicate the codon frequency preference of the target gene in P. falciparum, as such the translation machinery matches that of Plasmodium (Angov et al. 2008). Furthermore, greater expression levels of GTPCHI were achieved in the absence of Pfhsp70 due to expression of a possible Nterminal deletion product or E. coli protein. Purification conditions could be improved to obtain homogenous GTPCHI and further analysis (mass spectrometry and enzyme activity assays) would be required to determine the nature of soluble GTPCHI obtained. To improve the expression of soluble proteins the wheat germ expression system was used as an alternate host. However, GTPCHI expression was not effective, possibly due to degradation of mRNA template or the absence of translation enhancer elements. / Dissertation (MSc)--University of Pretoria, 2010. / Biochemistry / unrestricted

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