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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
31

Composite poly(dimethoxyaniline) electrochemical nanobiosensor for glufosinate and glyphosate herbicides

Songa, Everlyne Apiyo January 2008 (has links)
Philosophiae Doctor - PhD / In this thesis, I present a simple, sensitive and low cost electrochemical nanobiosensor for quantitative determination of the herbicides glufosinate, glyphosate and its metabolite aminomethylphosphonic acid (AMPA). Firstly, the nanostructured poly(2,5-dimethoxyaniline) (PDMA) materials were synthesized on gold electrode by the electrochemical "template"method using poly(4-styrenesulfonic acid) (PSS) as the dopant and structure-directing molecule. Fourier transform infrared (FTIR) spectroscopy, UV-Vis Spectroscopy, Transmission electron microscopy (TEM) and Scanning electron microscopy (SEM) studies inferred successful doping of the nanostructured PDMA film by PSS and that the template PSS directed the synthesis of both nanotubes and nanoparticles of PDMA with diameters less than 100 nm. / South Africa
32

Avalia??o da produ??o de esp?cies reativas de oxig?nio e da citotoxicidade in vitro mediada pelo sistema 2,4-pentanodiona/horseradish peroxidase/oxig?nio

Pinheiro, N?thale Rodrigues 28 March 2014 (has links)
Submitted by Nivaldo Melo (nivaldo.melo@ufvjm.edu.br) on 2015-11-30T17:13:26Z No. of bitstreams: 2 nathale_rodrigues_pinheiro.pdf: 3567634 bytes, checksum: 502f3816acde8f2f1b1ee7fe24e188f1 (MD5) license_rdf: 23898 bytes, checksum: e363e809996cf46ada20da1accfcd9c7 (MD5) / Approved for entry into archive by Rodrigo Martins Cruz (rodrigo.cruz@ufvjm.edu.br) on 2015-12-03T16:14:53Z (GMT) No. of bitstreams: 2 nathale_rodrigues_pinheiro.pdf: 3567634 bytes, checksum: 502f3816acde8f2f1b1ee7fe24e188f1 (MD5) license_rdf: 23898 bytes, checksum: e363e809996cf46ada20da1accfcd9c7 (MD5) / Made available in DSpace on 2015-12-03T16:14:53Z (GMT). No. of bitstreams: 2 nathale_rodrigues_pinheiro.pdf: 3567634 bytes, checksum: 502f3816acde8f2f1b1ee7fe24e188f1 (MD5) license_rdf: 23898 bytes, checksum: e363e809996cf46ada20da1accfcd9c7 (MD5) Previous issue date: 2014 / Funda??o de Amparo ? Pesquisa do estado de Minas Gerais (FAPEMIG) / O sistema ADEPT (antibody-directed enzyme prodrug therapy) ? uma terapia antitumoral que envolve a ativa??o catal?tica de um pr?-f?rmaco, nas proximidades do s?tio tumoral, por uma enzima conjugada a um anticorpo monoclonal com afinidade para ant?genos espec?ficos das c?lulas tumorais. O sistema composto pela enzima Horseradish peroxidase (HRP) e ?cido indol-3-ac?tico (IAA) tem sido estudado para o emprego na terapia ADEPT, e associado ? indu??o de apoptose de c?lulas tumorais. A 2,4-pentanodiona (PD) tamb?m atua como substrato da HRP sendo oxidada por ela atrav?s de uma rea??o cuja cin?tica ? semelhante ? da cat?lise do IAA e, portanto, pode representar uma alternativa para essa terapia. Este trabalho teve como objetivo realizar uma avalia??o da citotoxicidade mediada pelos produtos provenientes da oxida??o da PD pela HRP frente a diferentes linhagens celulares, utilizando para isso diferentes metodologias que determinam a viabilidade celular como o azul de Trypan, MTT e vermelho neutro assim, como a an?lise microsc?pica das altera??es celulares induzidas por esses sistemas; estabelecer uma compara??o com a citotoxicidade mediada pela oxida??o do IAA catalisada pela mesma enzima; verificar a incid?ncia de morte celular por apoptose mediada pelos sistemas IAA/HRP/O2 e PD/HRP/O2; al?m de verificar a produ??o e os tipos de esp?cies reativas de oxig?nio (ERO) produzidas pelos dois sistemas. Os experimentos permitiram evidenciar que as combina??es PD/HRP/O2 e IAA/HRP/O2 levam a forma??o de ERO, sendo as esp?cies provavelmente formadas pela oxida??o da PD o radical ?nion super?xido e o per?xido de hidrog?nio (H2O2) e pela oxida??o do IAA o H2O2. Foi observado, somente para o IAA, um aumento na forma??o de ERO com o uso de uma maior concentra??o do substrato. Quanto ao estudo de viabilidade celular, esse permitiu evidenciar, atrav?s das tr?s metodologias, o efeito citot?xico dos sistemas PD/HRP/O2 e IAA/HRP/O2, no entanto, o ensaio do MTT mostrou-se mais sens?vel para esse estudo. A oxida??o do IAA pela HRP induziu apoptose, contudo n?o foi poss?vel identificar o tipo de morte celular mediada pelo sistema PD/HRP/O2, provavelmente devido a um problema t?cnico durante algumas an?lises em citometria de fluxo, o Quenhcing. Apesar de o sistema IAA/HRP/O2 ter apresentado uma destrui??o celular mais expressiva, o substrato IAA quando testado na aus?ncia da enzima mostrou-se t?xico, o que n?o foi visto para a PD quando testada nas concentra??es de 1; 1,5 e 2 mM, o que a torna um bom substrato para o emprego na terapia ADEPT. / Disserta??o (Mestrado) ? Programa de P?s-gradua??o em Ci?ncias Farmac?uticas, Universidade Federal dos Vales do Jequitinhonha e Mucuri, 2014. / ABSTRACT The system ADEPT (antibody-directed enzyme prodrug therapy) is an antitumor therapy that involves catalytic activation of a prodrug near the tumor site by an enzyme conjugated to a monoclonal antibody with affinity for specific antigens of tumor cells. The system composed by horseradish peroxidase (HRP) enzyme and indole-3-acetic acid (IAA) has been studied for the use in ADEPT therapy, and associated with apoptosis induction on tumor cells. The 2,4-pentanedione (PD) also acts as a substrate for HRP and being oxidized through a reaction whose kinetics is similar to the catalysis of IAA and, therefore, might represent an alternative to this therapy. This study aimed to conduct a evaluation of the cytotoxicity mediated by products from the oxidation of PD by HRP against different cell lines, using different methodologies that determine cell viability as Trypan blue, MTT and Neutral Red, as well as morphologic changes of the cell induced by these systems; establish a comparison with the cytotoxicity mediated by the oxidation of IAA catalyzed by the same enzyme; verify the incidence of apoptosis mediated by IAA/HRP/O2 and PD/HRP/O2 systems; besides verifying the production and types of reactive species oxygen (ROS) produced by the two systems. The experiments allowed to show that PD/HRP/O2 and IAA/HRP/O2 combinations lead to the formation of ROS, being the species probably formed by oxidation of PD the radical superoxide anion and hydrogen peroxide (H2O2) and by the oxidation of IAA the H2O2. It was observed only for the IAA, an increase in ROS production using a higher concentration of the substrate. Regarding the study of cell viability, this allowed to evidence, through the three methodologies, the cytotoxic effect of PD/HRP/O2 and IAA/HRP/O2 systems, however, the MTT assay proved more sensitive for this study. The oxidation of the IAA by HRP induced apoptosis, but could not identify the type of cell death mediated by PD/HRP/O2 system, The oxidation of by HRP the IAA induced apoptosis, but could not identify the type of cell death mediated by PD/HRP/O2 system, probably due to a technical problem for a few flow cytometric analyzes, the Quenching. Although IAA/HRP/O2 system have presented a more significant cell destruction, the IAA substrate when tested in the absence of enzyme was toxic, what has not seen for PD when tested in the concentrations of 1, 1.5, and 2 mM, making it a good substrate for employment in ADEPT therapy.
33

Synthesis, electrodynamics and biosensor applications of novel sulphonated polyaniline nanocomposites

Michira, Immaculate Nyambura January 2007 (has links)
Philosophiae Doctor - PhD / The overall aim of this thesis was to prepare nanostructured more processable heteronuclear sulphonated polyanyline nanocomposites with electroconductive properties suitable for applications in biosensors. The sulphonated self-assembled polyaniline and derivatised polyaniline nanocomposites (SPAHs) were prepared by chemical oxidative polymerisation or electrical decomposition. The SPAHs prepared include those of polyaniline (PANi), poly-o-methoxyaniline (POMA) and poly-2.5 dimethoxyaniline (PDMA). Two types of sulphonic acids of heteronuclear aromatic hydrocarbons were used in the production of sulphonated SPAH composites. These were anthracene sulphonic acid (ASA) and naphthalene sulphonic acids (NSA) wich played both doping and surfactant roles. / South Africa
34

Estudo da interação da alga Prototheca zopfii com neutrófilos recuperados de leite bovino e ação do sistema AIA/HRP sobre este patógeno / Study of the interaction of the algae Prototheca zopfii with neutrophils recovered from bovine milk and action of the IAA/HRP on this pathogen

Cunha, Luciane Tavares da 02 July 2010 (has links)
Estudos têm mostrado a incidência de mastite bovina associada à alga Prototheca zopfii. O objetivo deste trabalho foi estudar a interação da P. zopfii com neutrófilos recuperados de leite bovino e avaliar o efeito do sistema ácido indol-3-acético/peroxidase de raiz forte (AIA/HRP) sobre a viabilidade deste microrganismo em experimentos in vitro. A P. zopfii foi recuperada de vacas com mastite clínica e, no laboratório, foram realizadas a caracterização molecular, morfológica e crescimento exponencial do microrganismo. Em seguida, neutrófilos recuperados de leite bovino foram incubados na ausência e na presença de P. zopfii opsonizada e foram avaliadas a produção de peróxido de hidrogênio, enzimas antioxidantes dos neutrófilos e microrganismo, e a capacidade fagocitária. Em outro estudo, a P. zopfii foi incubada com o sistema AIA/HRP e foram avaliadas a viabilidade por unidades formadoras de colônias (UFC), atividade de enzimas antioxidantes, integridade de membrana por exclusão com azul de Trypan e integridade do DNA. Os resultados foram analisados pela análise de variância com significância de 5% usando o teste Tukey. Foram observados diversos tamanhos celulares da P. zopfii, presença de autofluorescência, crescimento exponencial ao longo do tempo de incubação em que não foi possível determinar o início da fase de morte. Ainda, foram encontrados os genótipos 1, 2 e 3 nos isolados em estudo. A produção de peróxido de hidrogênio pelos neutrófilos na presença da alga foi estimulada 5 vezes em relação ao controle, estimulou a atividade das enzimas catalase (CAT) em 21% e glutationa redutase (GR) em 27% e não houve diferença significativa quanto à atividade de CAT, GR e superóxido dismutase (SOD) produzido pela P. zopfii. Também foi verificado que a P. zopfii não foi englobada pelo neutrófilo. O sistema AIA/HRP inibiu o crescimento do microrganismo em 45, 82 e 88% nos tempos de 4, 6 e 9 horas de incubação; a atividade da SOD, CAT, Glutationa Peroxidase (GPx) e GR aumentou respectivamente em 90, 120, 150% e 3,4 vezes; houve redução da viabilidade da P. zopfii em 10, 15, 20, 25 e 32% após os tempos de 4, 6, 8, 10 e 12 horas de incubação; e não afetou a integridade do DNA após 6 horas de incubação. Conclui-se que a P. zopfii é altamente resistente frente aos neutrófilos e demonstrou ser susceptível quanto ao efeito microbicida do sistema AIA/HRP. / Studies have shown the incidence of bovine mastitis associated with the algae Prototheca zopfii. The objective of this work was to study the interaction of P. zopfii with neutrophils recovered from bovine milk and to evaluate the effect of system indole-3-acetic acid/horseradish peroxidase (IAA/HRP) on the viability of this microorganism in vitro experiment. P. zopfii was recovered from cows with clinical mastitis and both the molecular and morphological characterization were performed besides the evaluation of exponential growth of the microorganism in the laboratory. Next, neutrophils recovered from bovine milk were incubated in the absence and presence of opsonized P. zopfii and were evaluated the production of hydrogen peroxide, antioxidant enzymes on neutrophils and microorganism, and phagocytic capacity. In another study, P. zopfii was incubated with the system IAA/HRP and the viability assessed by colony forming units (CFU), antioxidant enzymes activity, membrane integrity by exclusion with Trypan blue and DNA integrity. The results were analyzed by analysis of variance with a 5% significance using the Tukey test. Results from P. zopfii characterization showed various cellular sizes, presence of autofluorescence, exponential microorganism growth throughout the incubation time and was not possible to determine the beginning of the death. Moreover it was found genotypes 1, 2 and 3 in the isolates in study. The production of hydrogen peroxide by neutrophils in the presence of algae was stimulated 5 times compared to the control, increase the activity of catalase (CAT) in 21% and glutathione reductase (GR) in 27% was seen in neutrophils; and there was no significant difference in CAT, GR and superoxide dismutase (SOD) activity produced by P. zopfii. P. zopfii was not engulfment by neutrophils. The system IAA/HRP inhibited the growth of the microorganism in 45, 82 and 88% in the times of 4, 6 and 9 hours of incubation, the activity of SOD, CAT, glutathione peroxidase (GPx) and GR increased respectively by 90, 120, 150%, and 3.4 times, decreased the viability of P. zopfii 10, 15, 20, 25 and 32% after the times of 4, 6, 8, 10 and 12 hours of incubation, and did not affect the integrity of DNA after 6 hours of incubation. As a conclusion, P. zopfii is highly resistant to the neutrophils and demonstrated to be susceptible to the effect microbicidal of system IAA/HRP.
35

Enzymatically initiated synthesis of biomimetic receptors based on molecularly imprinted polymers by free radical polymerization / Synthèse de récepteurs biomimétiques basés sur les polymères à empreintes moléculaires par polymérisation radicalaire libre initiée par catalyse enzymatique

Daoud Attieh, Mira 01 April 2016 (has links)
Depuis de nombreuses années, l’utilisation d’enzyme pour la synthèse de polymères naturels ou synthétiques a largement été développée en tant que procédé alternatif plus vert et plus respectueux de l’environnement. En effet, comparée aux méthodes conventionnelles de synthèse, les enzymes offrent une sélectivité élevée, une capacité à réagir dans des conditions de réaction douces, ainsi que la possibilité de recyclage du biocatalyseur. D’autre part, les polymères à empreintes moléculaires (MIPs) sont des matériaux synthétiques avec des propriétés de reconnaissance moléculaire spécifique envers une molécule cible. Récemment, les MIPs ont été utilisés dans les applications environnementales et biomédicales de part leur propriétés de reconnaissance moléculaire, leur spécificité et sélectivité. Cependant, leur application reste limitée en raison de leur faible biocompatibilité et de la présence de résidu de polymérisation potentiellement nocif. Ce travail de thèse a pour objectif de proposer une méthode alternative pour la synthèse de MIPs basée sur le concept de chimie verte. La peroxydase de raifort (HRP) est utilisée pour initier la co-polymérisation en milieux aqueux de monomères fonctionnels méthacrylates et d’agents réticulants en catalysant la génération des radicaux libres. Différents hydrogels ont été synthétisés et caractérisés, en particulier une cytotoxicité plus faible a été obtenue comparée à celle des polymères synthétisés traditionnellement. La synthèse a été optimisée afin de pouvoir contrôler la taille des particules et le rendement de polymérisation. Des MIPs sous forme de nanoparticules ont été préparés en milieu aqueux pour plusieurs molécules de faible poids moléculaire ainsi que pour des protéines par polymérisation radicalaire libre initiée par HRP. L’effet de la méthode d’initiation a été évalué en comparant les propriétés de ces MIPs à ceux préparées par les méthodes traditionnellement. L’immobilisation de l’HRP a été aussi effectuée pour synthétiser des hydrogels et des MIPs. L’enzyme immobilisée a pu être réutilisée pour synthétiser des MIPs avec les mêmes performances en termes de morphologie, rendement, spécificité et sélectivité. Ces nouveaux matériaux offrent de nombreuses perspectives pour des applications environnementales et biomédicales. / Enzyme-catalyzed synthesis of natural and synthetic polymers has been developed since several decades, as an eco-friendly process. Compared to the conventional methods, enzymes offer high selectivity, ability to operate under mild conditions and to recycle the catalyst. On the other hand, molecularly imprinted polymers (MIPs) are synthetic materials with specific recognition properties for target molecules. They have recently attracted increasing attention in environmental and newly in biomedical applications for their specificity and selectivity. However, concerns about MIP toxicity for human and environment safety are of great importance. Herein, carrying forward the concept of green chemistry, an enzyme-mediated synthesis approach is described to prepare molecularly imprinted nanoparticles (MIP-NPs) in aqueous media. Horseradish peroxidase (HRP) is used to initiate the polymerization of methacrylate-based monomers and cross-linkers by catalyzing the generation of free radicals. Different hydrogels are synthesized and characterized. “Greener” hydrogels are obtained with lower cytotoxicity than that of polymers synthesized by traditional way. The hydrogels synthesis is optimized in order to control the particles sizes and polymerization yields. Moreover, water-compatible MIP nanoparticles for the recognition of different small molecules and proteins are prepared in aqueous media by HRP-initiated free radical polymerization and compared to MIPs prepared by the thermal or photopolymerization methods. HRP immobilization is also performed for hydrogels synthesis as well as MIP preparation. The reusability of immobilized enzyme is investigated for the preparation of several MIP batches with the same morphology, yield as well as good specificity and selectivity. We believe that this new synthesis method for MIPs will provide new opportunities to enlarge the use of molecular imprinting technology in biomedical and environmental applications.
36

Estudo da interação da alga Prototheca zopfii com neutrófilos recuperados de leite bovino e ação do sistema AIA/HRP sobre este patógeno / Study of the interaction of the algae Prototheca zopfii with neutrophils recovered from bovine milk and action of the IAA/HRP on this pathogen

Luciane Tavares da Cunha 02 July 2010 (has links)
Estudos têm mostrado a incidência de mastite bovina associada à alga Prototheca zopfii. O objetivo deste trabalho foi estudar a interação da P. zopfii com neutrófilos recuperados de leite bovino e avaliar o efeito do sistema ácido indol-3-acético/peroxidase de raiz forte (AIA/HRP) sobre a viabilidade deste microrganismo em experimentos in vitro. A P. zopfii foi recuperada de vacas com mastite clínica e, no laboratório, foram realizadas a caracterização molecular, morfológica e crescimento exponencial do microrganismo. Em seguida, neutrófilos recuperados de leite bovino foram incubados na ausência e na presença de P. zopfii opsonizada e foram avaliadas a produção de peróxido de hidrogênio, enzimas antioxidantes dos neutrófilos e microrganismo, e a capacidade fagocitária. Em outro estudo, a P. zopfii foi incubada com o sistema AIA/HRP e foram avaliadas a viabilidade por unidades formadoras de colônias (UFC), atividade de enzimas antioxidantes, integridade de membrana por exclusão com azul de Trypan e integridade do DNA. Os resultados foram analisados pela análise de variância com significância de 5% usando o teste Tukey. Foram observados diversos tamanhos celulares da P. zopfii, presença de autofluorescência, crescimento exponencial ao longo do tempo de incubação em que não foi possível determinar o início da fase de morte. Ainda, foram encontrados os genótipos 1, 2 e 3 nos isolados em estudo. A produção de peróxido de hidrogênio pelos neutrófilos na presença da alga foi estimulada 5 vezes em relação ao controle, estimulou a atividade das enzimas catalase (CAT) em 21% e glutationa redutase (GR) em 27% e não houve diferença significativa quanto à atividade de CAT, GR e superóxido dismutase (SOD) produzido pela P. zopfii. Também foi verificado que a P. zopfii não foi englobada pelo neutrófilo. O sistema AIA/HRP inibiu o crescimento do microrganismo em 45, 82 e 88% nos tempos de 4, 6 e 9 horas de incubação; a atividade da SOD, CAT, Glutationa Peroxidase (GPx) e GR aumentou respectivamente em 90, 120, 150% e 3,4 vezes; houve redução da viabilidade da P. zopfii em 10, 15, 20, 25 e 32% após os tempos de 4, 6, 8, 10 e 12 horas de incubação; e não afetou a integridade do DNA após 6 horas de incubação. Conclui-se que a P. zopfii é altamente resistente frente aos neutrófilos e demonstrou ser susceptível quanto ao efeito microbicida do sistema AIA/HRP. / Studies have shown the incidence of bovine mastitis associated with the algae Prototheca zopfii. The objective of this work was to study the interaction of P. zopfii with neutrophils recovered from bovine milk and to evaluate the effect of system indole-3-acetic acid/horseradish peroxidase (IAA/HRP) on the viability of this microorganism in vitro experiment. P. zopfii was recovered from cows with clinical mastitis and both the molecular and morphological characterization were performed besides the evaluation of exponential growth of the microorganism in the laboratory. Next, neutrophils recovered from bovine milk were incubated in the absence and presence of opsonized P. zopfii and were evaluated the production of hydrogen peroxide, antioxidant enzymes on neutrophils and microorganism, and phagocytic capacity. In another study, P. zopfii was incubated with the system IAA/HRP and the viability assessed by colony forming units (CFU), antioxidant enzymes activity, membrane integrity by exclusion with Trypan blue and DNA integrity. The results were analyzed by analysis of variance with a 5% significance using the Tukey test. Results from P. zopfii characterization showed various cellular sizes, presence of autofluorescence, exponential microorganism growth throughout the incubation time and was not possible to determine the beginning of the death. Moreover it was found genotypes 1, 2 and 3 in the isolates in study. The production of hydrogen peroxide by neutrophils in the presence of algae was stimulated 5 times compared to the control, increase the activity of catalase (CAT) in 21% and glutathione reductase (GR) in 27% was seen in neutrophils; and there was no significant difference in CAT, GR and superoxide dismutase (SOD) activity produced by P. zopfii. P. zopfii was not engulfment by neutrophils. The system IAA/HRP inhibited the growth of the microorganism in 45, 82 and 88% in the times of 4, 6 and 9 hours of incubation, the activity of SOD, CAT, glutathione peroxidase (GPx) and GR increased respectively by 90, 120, 150%, and 3.4 times, decreased the viability of P. zopfii 10, 15, 20, 25 and 32% after the times of 4, 6, 8, 10 and 12 hours of incubation, and did not affect the integrity of DNA after 6 hours of incubation. As a conclusion, P. zopfii is highly resistant to the neutrophils and demonstrated to be susceptible to the effect microbicidal of system IAA/HRP.
37

Crystallography in Four Dimensions : Methods and Applications

Carlsson, Gunilla January 2004 (has links)
<p>The four-electron reduction of dioxygen to water is the most exothermic non-photochemical reaction available to biology. A detailed molecular description of this reaction is needed to understand oxygen-based redox processes. Horseradish peroxidase (HRP) is a haem-containing redox enzyme capable of catalysing the reduction of dioxygen to water. We developed instrumentation and experimental methodology to capture and characterise by X-ray crystallography transient reaction intermediates in this reaction. </p><p>An instrument was designed (“the vapour stream system”) to facilitate reaction initiation, monitoring and intermediate trapping. In combination with single crystal microspectrophotometry, it was used to obtain conditions for capturing a reactive dioxygen complex in HRP. X-ray studies on oxidised intermediates can be difficult for various reasons. Electrons re-distributed in the sample through the photoelectric effect during X-ray exposure can react with high-valency intermediates. In order to control such side reactions during data collection, we developed a new method based on an angle-resolved spreading of the X-ray dose over many identical crystals. Composite data sets built up from small chunks of data represent crystal structures which received different X-ray doses. As the number of electrons liberated in the crystal is dose dependent, this method allows us to observe and drive redox reactions electron-by-electron in the crystal, using X-rays.</p><p>The methods developed here were used to obtain a three-dimensional movie on the X-ray-driven reduction of dioxygen to water in HRP. Separate experiments established high resolution crystal structures for all intermediates, showing such structures with confirmed redox states for the first time. </p><p>Activity of HRP is influenced by small molecule ligands, and we also determined the structures of HRP in complex with formate, acetate and carbon monoxide.</p><p>Other studies established conditions for successfully trapping the M-intermediate in crystals of mutant bacteriorhodopsin, but the poor diffraction quality of these crystals prevented high-resolution structural studies.</p>
38

Development of amperometric biosensor with cyclopentadienylruthenium (II) thiolato schiff base self-assembled monolayer (SAM) on gold

Ticha, Lawrence Awa January 2007 (has links)
A novel cyclopentadienylruthenium(II) thiolato Schiff base, [Ru(SC6H4NC(H)C6H4OCH2CH2SMe)(&eta / 5-C2H5]2 was synthesized and deposited as a selfassembled monolayer (SAM) on a gold electrode. Effective electronic communication between the Ru(II) centers and the gold electrode was established by electrostatically cycling the Shiff base-doped gold electrode in 0.1 M NaOH from -200 mV to +600 mV. The SAMmodified gold electrode (Au/SAM) exhibited quasi-reversible electrochemistry. The integrity of this electro-catalytic SAM, with respect to its ability to block and electro-catalyze certain Faradaic processes, was interrogated using Cyclic and Osteryoung Square Wave voltammetric experiments. The formal potential, E0', varied with pH to give a slope of about - 34 mV pH-1. The surface concentration, &Gamma / , of the ruthenium redox centers was found to be 1.591 x 10-11 mol cm-2. By electrostatically doping the Au/SAM/Horseradish peroxidase at an applied potential of +700 mV vs Ag/AgCl, a biosensor was produced for the amperometric analysis of hydrogen peroxide, cumene hydroperoxide and tert-butylhydroperoxide. The electrocatalytic-type biosensors displayed typical Michaelis-Menten kinetics with their limits of detection of 6.45 &mu / M, 6.92 &mu / M and 7.01 &mu / M for hydrogen peroxide, cumene hydroperoxide and tert-butylhydroperoxide respectively.
39

Crystallography in Four Dimensions : Methods and Applications

Carlsson, Gunilla January 2004 (has links)
The four-electron reduction of dioxygen to water is the most exothermic non-photochemical reaction available to biology. A detailed molecular description of this reaction is needed to understand oxygen-based redox processes. Horseradish peroxidase (HRP) is a haem-containing redox enzyme capable of catalysing the reduction of dioxygen to water. We developed instrumentation and experimental methodology to capture and characterise by X-ray crystallography transient reaction intermediates in this reaction. An instrument was designed (“the vapour stream system”) to facilitate reaction initiation, monitoring and intermediate trapping. In combination with single crystal microspectrophotometry, it was used to obtain conditions for capturing a reactive dioxygen complex in HRP. X-ray studies on oxidised intermediates can be difficult for various reasons. Electrons re-distributed in the sample through the photoelectric effect during X-ray exposure can react with high-valency intermediates. In order to control such side reactions during data collection, we developed a new method based on an angle-resolved spreading of the X-ray dose over many identical crystals. Composite data sets built up from small chunks of data represent crystal structures which received different X-ray doses. As the number of electrons liberated in the crystal is dose dependent, this method allows us to observe and drive redox reactions electron-by-electron in the crystal, using X-rays. The methods developed here were used to obtain a three-dimensional movie on the X-ray-driven reduction of dioxygen to water in HRP. Separate experiments established high resolution crystal structures for all intermediates, showing such structures with confirmed redox states for the first time. Activity of HRP is influenced by small molecule ligands, and we also determined the structures of HRP in complex with formate, acetate and carbon monoxide. Other studies established conditions for successfully trapping the M-intermediate in crystals of mutant bacteriorhodopsin, but the poor diffraction quality of these crystals prevented high-resolution structural studies.
40

Development of amperometric biosensor with cyclopentadienylruthenium (II) thiolato schiff base self-assembled monolayer (SAM) on gold

Ticha, Lawrence Awa January 2007 (has links)
A novel cyclopentadienylruthenium(II) thiolato Schiff base, [Ru(SC6H4NC(H)C6H4OCH2CH2SMe)(&eta / 5-C2H5]2 was synthesized and deposited as a selfassembled monolayer (SAM) on a gold electrode. Effective electronic communication between the Ru(II) centers and the gold electrode was established by electrostatically cycling the Shiff base-doped gold electrode in 0.1 M NaOH from -200 mV to +600 mV. The SAMmodified gold electrode (Au/SAM) exhibited quasi-reversible electrochemistry. The integrity of this electro-catalytic SAM, with respect to its ability to block and electro-catalyze certain Faradaic processes, was interrogated using Cyclic and Osteryoung Square Wave voltammetric experiments. The formal potential, E0', varied with pH to give a slope of about - 34 mV pH-1. The surface concentration, &Gamma / , of the ruthenium redox centers was found to be 1.591 x 10-11 mol cm-2. By electrostatically doping the Au/SAM/Horseradish peroxidase at an applied potential of +700 mV vs Ag/AgCl, a biosensor was produced for the amperometric analysis of hydrogen peroxide, cumene hydroperoxide and tert-butylhydroperoxide. The electrocatalytic-type biosensors displayed typical Michaelis-Menten kinetics with their limits of detection of 6.45 &mu / M, 6.92 &mu / M and 7.01 &mu / M for hydrogen peroxide, cumene hydroperoxide and tert-butylhydroperoxide respectively.

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