This thesis presents a numerical method for the simulation of fluid-structure interaction (FSI) problems on high-performance computers. The proposed method is specifically tailored to interactions between Newtonian fluids and a large number of slender viscoelastic structures, the latter being modeled as Cosserat rods. From a numerical point of view, such kind of FSI requires special techniques to reach numerical stability. When using a partitioned fluid-structure coupling approach this is usually achieved by an iterative procedure, which drastically increases the computational effort. In the present work, an alternative coupling approach is developed based on an immersed boundary method (IBM). It is unconditionally stable and exempt from any global iteration between the fluid part and the structure part. The proposed FSI solver is employed to simulate the flow over a dense layer of vegetation elements, usually designated as canopy flow. The abstracted canopy model used in the simulation consists of 800 strip-shaped blades, which is the largest canopy-resolving simulation of this type done so far. To gain a deeper understanding of the physics of aquatic canopy flows the simulation data obtained are analyzed, e.g., concerning the existence and shape of coherent structures.

This thesis presents a numerical method for the phase-resolving simulation of rigid particles and deformable bubbles in viscous, magnetohydrodynamic flows. The presented approach features solid robustness and high numerical efficiency. The implementation is three-dimensional and fully parallel suiting the needs of modern high-performance computing. In addition to the steps towards magnetohydrodynamics, the thesis covers method development with respect to the immersed boundary method which can be summarized in simple words by From rigid spherical particles to deformable bubbles. The development comprises the extension of an existing immersed boundary method to non-spherical particles and very low particle-to-fluid density ratios. A detailed study is dedicated to the complex interaction of particle shape, wake and particle dynamics. Furthermore, the representation of deformable bubble shapes, i.e. the coupling of the bubble shape to the fluid loads, is accounted for. The topic of bubble interaction is surveyed including bubble collision and coalescence and a new coalescence model is introduced. The thesis contains applications of the method to simulations of the rise of a single bubble and a bubble chain in liquid metal with and without magnetic field highlighting the major effects of the field on the bubble dynamics and the flow field. The effect of bubble coalescence is quantified for two closely adjacent bubble chains. A framework for large-scale simulations with many bubbles is provided to study complex multiphase phenomena like bubble-turbulence interaction in an efficient manner.

The article describes direct numerical simulations using an Euler–Lagrange approach with an immersed-boundary method to resolve the geometry and trajectory of particles moving in a flow. The presentation focuses on own work of the authors and discusses elements of physical and numerical modeling in some detail, together with three areas of application: microfluidic transport of spherical and nonspherical particles in curved ducts, flows with bubbles at different void fraction ranging from single bubbles to dense particle clusters, some also subjected to electro-magnetic forces, and bedload sediment transport with spherical and nonspherical particles. These applications with their specific requirements for numerical modeling illustrate the versatility of the approach and provide condensed information about main findings.

In meshfree methods, partial differential equations are solved on an unstructured cloud of points distributed throughout the computational domain. In collocated meshfree methods, the differential operators are directly approximated at each grid point based on a local cloud of neighboring points. The set of neighboring nodes used to construct the local approximation is determined using a variable search radius. The variable search radius establishes an implicit nodal connectivity and hence a mesh is not required. As a result, meshfree methods have the potential flexibility to handle problem sets where the computational grid may undergo large deformations as well as where the grid may need to undergo adaptive refinement. In this work we develop the sharp interface formulation of the immersed boundary method for collocated meshfree approximations. We use the framework to implement three meshfree methods: General Finite Differences (GFD), Smoothed Particle Hydrodynamics (SPH), and Moving Least Squares (MLS). We evaluate the numerical accuracy and convergence rate of these methods by solving the 2D Poisson equation. We demonstrate that GFD is computationally more efficient than MLS and show that its accuracy is superior to a popular corrected form of SPH and comparable to MLS. We then use GFD to solve several canonic steady state fluid flow problems on meshfree grids generated using uniform and variable radii Poisson disk algorithm.

This research is mainly focused on the development of the adaptive Cartesian grid methods for compressibl  e flow. At first, the ghost cell method and its applications for inviscid compressible flow on adaptive tree Cartesian grid are developed. The proposed method is successfully used to evaluate various inviscid compressible flows around complex bodies. The mass conservation of the method is also studied by numerical analysis. The extension to three-dimensional flow is presented. Then, an h-adaptive Runge–Kutta discontinuous Galerkin (RKDG) method is presented in detail for the development of high accuracy numerical method under Cartesian grid. This method combined with the ghost cell immersed boundary method is also validated by well documented test problems involving both steady and unsteady compressible flows over complex bodies in a wide range of Mach numbers. In addition, in order to suppress the failure of preserving positivity of density or pressure, which may cause blow-ups of the high order numerical algorithms, a positivity-preserving limiter technique coupled with h-adaptive RKDG method is developed. Such a method has been successfully implemented to study flows with the large Mach number, strong shock/obstacle interactions and shock diffraction. The extension of the method to viscous flow under the adaptive Cartesian grid with hybrid overlapping bodyfitted grid is developed. The method is validated by benchmark problems and has been successfully implemented to study airfoil with ice accretion. Finally, based on an open source code, the detached eddy simulation (DES) is developed for massive separation flow, and it is used to perform the research on aerodynamic performance analysis over the wing with ice accretion.

Lattice Boltzmann method (LBM) has been developed as a powerful numerical approach to simulate the complex fluid flow and heat transfer phenomena during the past two decades. As a mesoscale method based on the kinetic theory, LBM has several advantages compared with traditional numerical methods such as physical representation of microscopic interactions, dealing with complex geometries and highly parallel nature. Lattice Boltzmann method has been applied to solve various fluid behaviors and heat transfer process like conjugate heat transfer, magnetic and electric field, diffusion and mixing process, chemical reactions, multiphase flow, phase change process, non-isothermal flow in porous medium, microfluidics, fluid-structure interactions in biological system and so on. In addition, as a non-body-conformal grid method, the immersed boundary method (IBM) could be applied to handle the complex or moving geometries in the domain. The immersed boundary method could be coupled with lattice Boltzmann method to study the heat transfer and fluid flow problems. Heat transfer and fluid flow are solved on Euler nodes by LBM while the complex solid geometries are captured by Lagrangian nodes using immersed boundary method. Parallel computing has been a popular topic for many decades to accelerate the computational speed in engineering and scientific fields. Today, almost all the laptop and desktop have central processing units (CPUs) with multiple cores which could be used for parallel computing. However, the cost of CPUs with hundreds of cores is still high which limits its capability of high performance computing on personal computer. Graphic processing units (GPU) is originally used for the computer video cards have been emerged as the most powerful high-performance workstation in recent years. Unlike the CPUs, the cost of GPU with thousands of cores is cheap. For example, the GPU (GeForce GTX TITAN) which is used in the current work has 2688 cores and the price is only 1,000 US dollars. The release of NVIDIA's CUDA architecture which includes both hardware and programming environment in 2007 makes GPU computing attractive. Due to its highly parallel nature, lattice Boltzmann method is successfully ported into GPU with a performance benefit during the recent years. In the current work, LBM CUDA code is developed for different fluid flow and heat transfer problems. In this dissertation, lattice Boltzmann method and immersed boundary method are used to study natural convection in an enclosure with an array of conduting obstacles, double-diffusive convection in a vertical cavity with Soret and Dufour effects, PCM melting process in a latent heat thermal energy storage system with internal fins, mixed convection in a lid-driven cavity with a sinusoidal cylinder, and AC electrothermal pumping in microfluidic systems on a CUDA computational platform. It is demonstrated that LBM is an efficient method to simulate complex heat transfer problems using GPU on CUDA.

Simulação de fluidos tem sido um dos focos principais de pesquisa em computação gráfica nos últimos anos. O interesse por tal assunto é motivado pelas aplicações na indústria cinematográfica, jogos e sistemas voltados para simulação de fenômenos físicos realísticos em tempo real. Neste trabalho atacamos um problema ainda pouco explorado pela comunidade de computação gráfica, a simulação de fluidos em imagens digitais. Adotamos uma abordagem relacionando fluidos multifásicos, onde propriedades da imagem são incorporadas às equações de Navier-Stokes a fim de permitir que objetos contidos nas imagens \"escoem\" interagindo a forças que agem no sistema / In the last years, fluid simulation has been one of the main focus in Computer Graphics. Such a reason is related to applications to film industry, games and frameworks for realtime physical problem simulations. In this work we aim at accessing a problem which is not so much explored in Computer Graphics: fluid simulation in digital images. We adopt a approach related to multiphase fluids, where properties of the image are set to the Navier-Stokes equations in order to allow that objects into the images \"flow\"in accordance to the forces in the system

A equação de Poisson-Boltzmann tem uma vasta gama de aplicações, desde a ciência coloidal e microfluídica até bioquímica e biofísica. O potencial elétrico na dupla camada elétrica leva a um potencial de força, em termos das equações de Navier-Stokes que é então usado para simular o fluxo resultante. Em escoamentos bifásicos uma simplificação desta equação é usada para se obter o campo de pressão. O presente trabalho tem como principal objetivo estudar o problema de Poisson-Boltzmann com coeficiente constante e propor uma solução através da implementação do método das interfaces imersas utilizando diferenças finitas de altas ordens de precisão numérica. / The Poisson-Boltzmann equation has a wide range of applications, from colloidal and microfluidic science to biochemistry and biophysics. The electrical potential in electric double layer leads to a force potential in terms of the Navier-Stokes equations that is then used to simulate the resulting flow. In biphasic flows a simplification of this equation is used to obtain the pressure field. The present study has as main objective to study the problem of Poisson-Boltzmann with constant coefficient and propose a solution through implementation of the immersed interfaces method using high order finite difference scheme sand thus get high order numerical accuracy.

O estudo do transporte de sedimentos, partindo da estimativa de estruturas turbulentas relevantes, constituiu o principal foco deste trabalho. Assim, a equação de transporte de massa (advecção-difusão) foi aplicada em conjunto com as equações de Navier-Stokes e da continuidade filtradas. Neste contexto, houve a necessidade de uma descrição conveniente da turbulência, o que ocorreu mediante a aplicação da simulação de grandes escalas acoplada a modelos de viscosidade turbulenta sub-malha. O método de fronteira imersa foi utilizado na modelação da interface sólido/fluido, representada pela geometria de fundo dos canais. As equações de Navier-Stokes filtradas e da continuidade foram resolvidas numericamente pelo método de passos fracionados, o qual estabeleceu o almejado acoplamento entre ambas. Na discretização das equações governantes foi utilizado o método de diferenças finitas, aplicado sobre malhas deslocadas. Os esquemas explícitos de Adams-Bashforth (de segunda e quarta ordens) foram utilizados no avanço temporal das velocidades do escoamento e das concentrações de sedimentos. Uma nova formulação para a velocidade de sedimentação foi desenvolvida analiticamente, enquanto que eventuais fluxos de ressuspensão foram impostos como condição de contorno no fundo do canal. Todos os códigos computacionais, que estabeleceram as diretrizes e a lógica de cálculo, foram criados no contexto deste trabalho. Os resultados obtidos indicam que a simulação de grandes escalas, associada ao método de fronteira imersa, considerando velocidade de sedimentação conforme aqui modelada, e ainda utilizando a equação de advecção-difusão para o transporte de massa, constituem ferramentas altamente adequadas à estimativa do transporte de sedimentos pela água. / The goal of this work is the research of sediment transport phenomena, deriving from outstanding turbulent eddies estimative. Thus, the mass transport equation (advection-diffusion) was connected with the filtered Navier-Stokes and continuity equations. In this context, the large-eddy simulation and sub-grid viscosity modeling established a convenient description of turbulence effects. The immersed boundary method was applied to model solid/fluid interface, represented here by the shapes of channel bottom. The filtered Navier-Stokes and continuity equations were solved by the fractional step method. The equations were discretized with the finite difference method, applied over staggered grids, whereas explicit Adams-Bashforth schemes (second and forth orders) were used in temporal advancement of velocities and sediment concentration fields. A new analytical formulation for settling velocity was obtained, while fortuitous re-suspension flux was applied like a boundary condition in the channel bottom. The computational code was totally developed in this work. The results of present simulations show that large-eddy simulation coupled to the immersed boundary method, considering, yet, the settling velocity of particles and the advection-diffusion equation for mass transport, constitute potential tools for sediment transport evaluation in water flows.

O estudo do transporte de sedimentos, partindo da estimativa de estruturas turbulentas relevantes, constituiu o principal foco deste trabalho. Assim, a equação de transporte de massa (advecção-difusão) foi aplicada em conjunto com as equações de Navier-Stokes e da continuidade filtradas. Neste contexto, houve a necessidade de uma descrição conveniente da turbulência, o que ocorreu mediante a aplicação da simulação de grandes escalas acoplada a modelos de viscosidade turbulenta sub-malha. O método de fronteira imersa foi utilizado na modelação da interface sólido/fluido, representada pela geometria de fundo dos canais. As equações de Navier-Stokes filtradas e da continuidade foram resolvidas numericamente pelo método de passos fracionados, o qual estabeleceu o almejado acoplamento entre ambas. Na discretização das equações governantes foi utilizado o método de diferenças finitas, aplicado sobre malhas deslocadas. Os esquemas explícitos de Adams-Bashforth (de segunda e quarta ordens) foram utilizados no avanço temporal das velocidades do escoamento e das concentrações de sedimentos. Uma nova formulação para a velocidade de sedimentação foi desenvolvida analiticamente, enquanto que eventuais fluxos de ressuspensão foram impostos como condição de contorno no fundo do canal. Todos os códigos computacionais, que estabeleceram as diretrizes e a lógica de cálculo, foram criados no contexto deste trabalho. Os resultados obtidos indicam que a simulação de grandes escalas, associada ao método de fronteira imersa, considerando velocidade de sedimentação conforme aqui modelada, e ainda utilizando a equação de advecção-difusão para o transporte de massa, constituem ferramentas altamente adequadas à estimativa do transporte de sedimentos pela água. / The goal of this work is the research of sediment transport phenomena, deriving from outstanding turbulent eddies estimative. Thus, the mass transport equation (advection-diffusion) was connected with the filtered Navier-Stokes and continuity equations. In this context, the large-eddy simulation and sub-grid viscosity modeling established a convenient description of turbulence effects. The immersed boundary method was applied to model solid/fluid interface, represented here by the shapes of channel bottom. The filtered Navier-Stokes and continuity equations were solved by the fractional step method. The equations were discretized with the finite difference method, applied over staggered grids, whereas explicit Adams-Bashforth schemes (second and forth orders) were used in temporal advancement of velocities and sediment concentration fields. A new analytical formulation for settling velocity was obtained, while fortuitous re-suspension flux was applied like a boundary condition in the channel bottom. The computational code was totally developed in this work. The results of present simulations show that large-eddy simulation coupled to the immersed boundary method, considering, yet, the settling velocity of particles and the advection-diffusion equation for mass transport, constitute potential tools for sediment transport evaluation in water flows.