Drift was measured monthly at four sites on a southern Appalachian stream in order to examine spatial and temporal patterns along elevational and stream size gradients. Measurements consisted of four, one-hour samples corresponding to dawn, mid-day, dusk, and mid-night monthly for 14 months. On average, only 10% of the drifting insects were terrestrial, but terrestrial inputs became numerically important during summer and fall. There were no significant differences among sites in aquatic insect drift density, although taxa richness and total drift (#/sec) increased significantly downstream. None of the sites exhibited a consistent diel pattern. But, all of the lower three sites exhibited decreased drift density during the day. <i>Baetis</i>, the dominant aquatic taxon in the drift, exhibited a typical alterans patterns at UBC, LBC, and CC. Aquatic insect drift density was highest in summer when flows were lowest, while total drift (#/s) was highest in late spring and winter. FPOM and mean daily water temperature accounted for 64% of the variation in total aquatic insect drift density and 60% of <i>Baetis</i> drift density, suggesting both passive and active components in drift. Both variables were also highly correlated with drift density. Taxonomic composition of drift differed from that of the benthos, indicating drift was not simply random, but that taxa vary in the propensity to drift. Overall, this study found more evidence of temporal (diel and seasonal) drift patterns than spatial (along the gradient). / Master of Science

In the southeastern United States, ephemeral wetlands in pine flatwoods provide important habitat for amphibians and aquatic invertebrates, but extensive deforestation has destroyed or isolated many wetlands and fire suppression has altered vegetation in others. My goals were to identify how wetland hydroperiods have changed through time and to examine the effects of long-term fire suppression on aquatic communities, including Reticulated Flatwoods Salamanders (Ambystoma bishopi) and Ornate Chorus Frogs (Pseudacris ornata). Chapter 1 used a modeling approach to relate wetland hydroperiods to current climate conditions and to hindcast historic conditions. Over the past 118 years, hydroperiods were often unfavorable for A. bishopi reproduction, and in recent years hydroperiods were shortened by persistent drought. Chapters 2 and 3 focused on identifying the effects of shifting from an open, grass dominated wetland to a wetland with high canopy cover and little herbaceous vegetation. In Chapter 2, I quantified amphibian and invertebrate communities in several wetlands. A. bishopi and P. ornata tended to occupy wetlands with lower canopy cover and higher herbaceous vegetation cover. Aquatic invertebrate abundance was generally higher in wetlands with lower shrub density and lower canopy cover. In Chapter 3, I examined how a reduction in herbaceous vegetation affected tadpoles when a predatory crayfish was present using two experiments. Crayfish were effective predators of both species across all vegetation treatments and often caused nonlethal tail injury. My results suggest that managers should focus on ensuring that wetland basins regularly burn, and wetlands with longer hydroperiods should be a management priority. / Master of Science

Thesis (MSc)--University of Stellenbosch, 2004. / ENGLISH ABSTRACT: Agricultural environments are usually contaminated with mixtures of antropogenically introduced chemicals as a result of pesticide spraying, which can affect beneficial, nontarget soil invertebrates, such as earthworms negatively. Most studies on mixture toxicity have focused on interactions of chemicals with similar structures and mechanisms. However, chemical mixtures may occur as conglomerates of diverse structures and toxicological mechanisms in the environment. This study was aimed at assessing the effects of pesticides singly, and in a mixture, on earthworms, using lifecycle parameters (growth and reproduction) and biomarkers (neutral red retention (NRR) assay and acetylcholinesterase (AChE) inhibition) as endpoints. Thus, to determine whether any interactions occurred between the pesticides as shown by the measured endpoints. Another aim was to validate the use of the chosen biomarkers for assessing mixture toxicity. The pesticides used were from three groups: organophosphates, heavy metal-containing pesticides and pyrethroids. From these three groups, four of the most commonly used pesticides in the orchards and vineyards of the Western Cape, South Africa, were chosen, namely chlorpyrifos (organophosphate), azinphos-methyl (organophosphate), copper oxychloride (heavy metal-containing fungicide) and cypermethrin (pyrethroid). Earthworms were exposed in the laboratory to a range of concentrations of chlorpyrifos and copper oxychloride singly, and in 1:1 mixtures of these pesticides in artificial soil, for four weeks. After the exposure period, the biomass change was determined as measure of growth, and cocoon production, hatching success and number of hatchlings per cocoon were determined as measures of reproduction. Growth (biomass change) and reproduction (cocoon production) were affected by the highest concentration treatment (20mg/kg) of chlorpyrifos, but copper oxychloride and the mixture of the two pesticides showed no observable effects on lifecycle parameters. Dose related effects on NRR times were however determined for both pesticides and the mixture. Dose related effects on AChE activity were found for chlopyrifos and the mixture of the two pesticides, but not for copper oxychloride. Short-term exposures (48 hours) of earthworms to the following pesticides in artificial groundwater: chlorpyrifos, copper oxychloride, azinphos-methyl, cypermethrin, chlorpyrifos-copper oxychloride, chlorpyrifos -azinphos-methyl and chlorpyrifos-cypermethrin, were done followed by the determination of AChE inhibition. Dose related effects were exhibited on the AChE activity of earthworms exposed to chlorpyrifos, a mixture of chlorpyrifos and copper oxychloride, azinphos-methyl, and a mixture of azinphos-methyl and chlorpyrifos. Copper oxychloride, cypermethrin and the mixture of chlorpyrifos and cypermethrin had no effect on AChE activity. Earthworms died at the highest exposure concentration of the mixture of chlopyrifos and cypermethrin. Results have shown that although the pesticides did not cause observable effects on lifecycle parameters, there were effects at subcellular and biochemical level, as shown by the biomarkers. Mixtures of pesticides, in some instances, affected earthworms differently from their single components, indicating interactions between the pesticides in mixtures, as shown by the measured endpoints. The NRR assay proved to be a good general biomarker of soil contamination, and the AChE activity could also be a valuable tool in assessing the effects of organophosphate mixtures and mixtures of organophosphates and pesticides from other groups. / AFRIKAANSE OPSOMMING: Nie-teiken organismes, soos erdwurms, word negatief beïnvloed deur mengsels van antropogeniese chemikalieë in landbou-omgewings. Die meeste studies wat handel oor die toksisiteit van chemiese mengsels het tot dusver gefokus op chemikalieë van dieselfde aard en met dieselfde meganismes van werking. Mengsels van chemiese stowwe kan egter as konglomerate van 'n verskeidenheid strukturele eienskappe en met verskillende toksiese meganismes in die omgewing aangetref word. Tydens die studie is gepoog om die effekte van enkel pestisiede sowel as mengsels daarvan op erdwurms te bestudeer, deur van lewensloop kenmerke (groei en voortplanting) en biomerkers (neutraalrooi retensietyd - NNR en inhibisie van asetielcholienesterase -AChE) as eindpunte gebruik te maak. 'n Verdere doel van die studie was om vas te stel of daar enige wisselwerkings tussen die verskillende pestisiede plaasvind, soos aangetoon deur die gemete eindpunte, en verder ook om die gebruik van die gekose biomerkers as maatstawwe van mengseltoksisiteit te evalueer. Die pestisiede wat gebruik is, is van drie verskillende groepe afkomstig: organofosfate, swaarmetale en piretroiede. Van hierdie drie groepe is vier van die pestisiede wat vry algemeen in boorde en wingerde in die Weskaap, Suid-Afrika, gebruik word, geïdentifiseer. Hierdie stowwe is chlorpyrifos (organofosfaat), azinphos-metiel (organofosfaat), koperoksichloried (swaarmetaalbevattende fungisied) en sipermetrien (piretroied). Erdwurms is in die laboratorium aan 'n reeks konsentrasies van chlorpyrifos en koperoksichloried as enkel toksikante en as 1:1 mengsels in kunsmatige grond, vir vier weke blootgestel. Voor en na die blootstellingsperiode is die biomassa van die wurms, as maatstaf van groei, bepaal en kokonproduksie, uitbroeisukses en getal nakomelinge per kokon bepaal as maatstawwe van voortplantingsvaardigheid. Groei (biomassaverandering) en voortplanting (kokonproduksie) is beinvloed deur behandeling met die hoogste konsentrasie (20 mg/kg) chlorpyrifos, terwyl geen effek van koperoksichloried of die mengsel van hierdie twee pestisiede gevind is nie. Daar is gevind dat beide die pestisiede, enkel en in die mengsel, die NRR tye beinvloed het. Die AChE aktiwiteit is beinvloed deur chlorpyrifos en die mengsel, maar nie deur die koperoksichloried nie. Korttermyn blootstellings van erdwurms (48 uur), in kunsmatige grondwater, van erdwurms aan chlorpyrifos, koperoksichloried, azinphos-metiel en sipermetrien as enkel toksikante en mengsels van chlorpyrifos-koperoksichloried, chlorpyrifos-azinphos-metiel en chlorpyrifos-sipermetrien, is gedoen en gevolg deur die bepaling van AChE inhibisie. Koperoksichloried, cypermetrien en die chlorpyrifos-sipermetrien mengsel het geen waarneembare effek op die AChE aktiwiteit gehad nie ?????. Die erdwurms wat blootgestel is aan die hoogste konsentrasie in die mengsel van chlorpyrifos-sipermetrien het doodgegaan. Die resultate het getoon dat die pestisiede nie in die korttermyn die lewensloopkenmerke in enige waarneembare mate geaffekteer het nie maar daar was effekte op sellulêre en biochemiese vlakke soos aangetoon deur die biomerkers. Sommige mengsels van die pestisiede het die erdwurms verskillend van die enkelstowwe geaffekteer. Daar het dus wisselwerking tussen sommige van die pestisiede wat in mengsels aangewend is, plaasgevind, soos aangetoon deur die gemete eindpunte. Die NRR toets, as breë-spektrum biomerker was 'n goeie maatstaf van kontaminasie in grond en daar is aanduidings dat die AChE aktiwiteit, as 'n spesifieke biomerker, 'n nuttige maatstaf kan wees om die effekte van organofosfaatmengsels en mengsels van hierdie chemiese groep en die van ander chemikalieë aan te toon.

Graduation date: 2005

Thesis (M.S.)--Oregon State University, 1989. / Typescript (photocopy). Includes bibliographical references. Also available on the World Wide Web.

Thesis (M.A.)--Humboldt State University, 2009. / Includes bibliographical references (leaves xi-xiv, following leaf 48). Also available via Humboldt Digital Scholar.

Forests in the Drakensberg Mountains, although generally small and fragmented, represent a wealth of globally significant biodiversity. This is especially true of the invertebrate fauna, which includes a range of localized endemic species. Ground dwelling, flightless invertebrates living in forests show relative immobility and poor dispersal abilities compared to birds, butterflies and other animal taxa. The naturally fragmented state of Afrotemperate forests also geographically isolates these taxa. No quantified, systematic surveys of flightless invertebrates have been conducted in Afrotemperate forests in the Drakensberg Mountains. This means that, to date, invertebrates have not been considered in the management of these habitats. However, invertebrates are vitally important in ecosystem functioning and maintenance and must be included in management plans. This study quantified flightless invertebrate diversity in Afrotemperate forest patches in the Drakensberg by investigating spatial patterns and seasonal changes in invertebrate diversity. The broad objectives were to: 1) Determine the appropriate spatial scale at which conservation of flightless invertebrates should be implemented; 2) Determine which season, taxa and sampling methods are most suitable for biodiversity assessment and monitoring in Afrotemperate forest; and 3) Investigate methods of prioritizing Afrotemperate forests for conservation of flightless invertebrate diversity. Seventeen forest patches in six valleys in four Drakensberg reserves (Rugged Glen Nature Reserve, Royal Natal National Park, Cathedral Peak and Injisuthi) were sampled in the summer of 2004/2005. In addition, three forests at Injisuthi were sampled in March, June, September and December 2004 to enable seasonal comparisons. Sampling methods included soil samples, leaf litter samples, pitfall traps, active search quadrats and tree beats. The study focused on terrestrial molluscs (Class Gastropoda), earthworms (Class Annelida), onychophorans (Class Onychophora), centipedes (Class Chilopoda), millipedes (Class Diplopoda) and ants (Class Insecta). Target taxa were sorted to morphospecies and then identified to species by taxonomic experts. Seventy-two species and a total of 5261 individual specimens from the six target taxa were collected. Species composition of sites varied along the north-south gradient, and species turnover (beta diversity) was related to the distance between sites. Flightless invertebrate species richness and community structure fluctuated seasonally. Therefore, I recommend that sampling should take place during the wet season (summer months). Molluscs were the most suitable taxon among those surveyed to represent flightless invertebrate diversity and leaf litter samples and active search quadrats are the most suitable sampling methods for flightless invertebrates in forest. This study compared approaches to prioritizing Afrotemperate forests in terms of their invertebrate diversity using ranked species richness with complementarity indices of species presence/absence, taxonomic distinctness (orders, families and genera) and endemicity. There was no consistent spatial trend in the priority ranking of forests based on species richness. Complementarity based on species richness only required eight out of 17 forests to represent all 62 species. Although complementarity based on taxonomic distinctness and endemicity required fewer sites, not all species were represented. The minimum set of sites identified using complementarity based on species richness and augmented with information on taxa of conservation importance (local endemic and threatened species) was the most rigorous approach to prioritizing Afrotemperate forest patches in the Drakensberg for flightless invertebrate conservation. Urgent conservation interventions are required because invertebrates play a critical role in ecosystem functioning. As many forest patches and invertebrate populations as possible should be protected to conserve the full complement of invertebrate species of the region. Special management attention should be paid to the eight forests identified as priority sites in the complementarity analyses. Forest patches cannot survive in isolation, so it is important to manage the grassland, riverine vegetation, forest ecotone and forests holistically. Provisional targets were set for the conservation of flightless invertebrates, based on estimates of the requirements for persistence of invertebrates in Afrotemperate forest, made within the constraints of available information and expert opinion. / Thesis (M.Sc.)-University of KwaZulu-Natal, Pietermaritzburg, 2006.

This study was an investigation of lotic macroinvertebrate distribution in northeastern Oregon at two different spatial and biological scales. Examination of assemblages at a limited spatial scale revealed relationships with natural and disturbance gradients and led to questions about distribution of a population at broader spatial scales. In a 16 kilometer section of the North Fork John Day River, I examined the relationship of invertebrate assemblages to habitat and fine sediment deposition. This river section was subjected to sediment inputs resulting from several years of floodplain mine-tailing leveling, and erosion and tributary channel scouring following a forest fire. Invertebrate assemblages differed between habitat types. The proportion of sediment tolerant invertebrates, especially oligochaete worms, increased with higher amounts of deposited fine sediment, but total invertebrate abundance was not related to deposited sediment. The response of sediment tolerant invertebrates appeared to reflect cumulative impacts from multiple input points and downstream transport of sediment and cumulative and/or increasing impacts over the two years of sampling. In studying assemblages in the North Fork, I noticed an unusual abundance of the caddisfly, Lopidostoma pluviale (Milne). In a more spatially extensive examination of a population, I investigated distribution of this caddisfly in the Blue Mountain region of northeastern Oregon. L. pluviale was more common and/or abundant further downstream than would be expected for a shredding feeder based on the River Continuum Concept (Vannote, et al., 1980). Through gut content analyses, I demonstrated that this species is much more of a generalist feeder than its designation as a shredder would imply. Consequently, its distribution is not limited to headwaters where allochthonous food resources are abundant. I hypothesize that non-food environmental factors may be more important in determining the distribution of this species. Results of this research indicate that assemblage studies can reveal interesting relationships with environmental conditions. In addition, paying attention to unusual distributions of taxa in assemblage studies can lead to further studies that can improve our understanding of the biology and ecology of species. / Graduation date: 2004

The savanna is an important biome, which is under threat from land transformation, and it is therefore a focus for conservation planning. Yet, the invertebrate fauna of this biome is poorly documented and hence there is a need to provide baseline data for this component of biodiversity. This project aimed to provide relevant information that can be used by conservation planners and ecologists, by recommending a sampling strategy for the collection of specific taxa for savanna invertebrate surveys. The effectiveness and efficiency of a sampling strategy using passive and active sampling methods was assessed to provide recommendations for a multi-taxa approach to sampling invertebrates in a savanna ecosystem. In the collection of data, volunteers assisted and they were evaluated in comparison with experienced researchers to assess the effectiveness, efficiency and benefits of using volunteers to carry out multi-taxa invertebrate surveys. In addition, cross-taxon congruency and congruency across taxonomic levels were assessed between nine invertebrate taxa, to select potential surrogates to reduce biodiversity survey costs for conservation planning. Fieldwork was carried out in the Mkhuze Game Reserve (27.67°S:32.27°E, 400km2 ), Phinda Private Game Reserve (27.78°S:32.35°E, 140km2 ) and False Bay Park (27.94°S:32.38°E, 25km2 ) in north-eastern Kwazulu-Natal, South Africa. Forty-three different sites were sampled between November 2002 and March 2005 (summer months). Twenty of these sites were re-sampled across years and in different months during the summer season, giving 77 sampling events. Fifty-four volunteers recruited by the Earthwatch Institute assisted in the collection of data. Lepidoptera, Hymenoptera (Apoidea), Diptera (Asilidae, Bombyliidae), Neuroptera, Odonata, Hemiptera (Cicadellidae), Coleoptera (Cetoniinae, Scarabaeinae), Orthoptera, Blattodea, Isoptera, Araneae (Araneidae, Thomisidae, Oxyopidae), Scorpionida, Myriapoda (Diplopoda, Chilopoda), Mollusca and Annelida were sampled using four active searching methods (transects, tree beating, leaf litter and sweep sampling) and two passive methods (pan traps and baited traps). In its entirety, this project sampled 50 558 individuals from 797 invertebrate species and an extensive database consisting of 33 257 records now exists. A standardised sampling protocol is described for the effective sampling of multiple invertebrate taxa in a savanna biome and recommendations are made for improving the efficacy and completeness of invertebrate surveys based on the application of species accumulation models. Restrictive active searching methods (quadrats) were found to be more effective for sampling epigaeic invertebrates and should be used in conjunction with leaf litter samples. Flying and plant-dwelling invertebrates should be sampled using a range of sampling methods which include baited, malaise and pan traps, active searching along transects and vacuum sampling. I suggest over 75% of the Lovel/, s.1. - MSc. Thesis i ii total estimated fauna to be a satisfactory and realistic level of inventory completeness for making valid comparisons between regions and across sites. Volunteers sampled lower rates of species accumulation, species richness and unique species when using timed, active search methods. Nevertheless, volunteers and researchers were shown to perform equally well when using un-timed, active searching methods. Previous experience or knowledge of scientific method was beneficial when researchers assessed the perceived usefulness of volunteers to researchers for carrying out fieldwork. The project experience raised the volunteers' environmental awareness, knowledge about biodiversity, invertebrates and conservation research, and enabled volunteers to participate in or design locally relevant conservation based projects on their return home. Cross-taxon congruencies were observed. However, relationships were weak and potential surrogates could not be selected. The use of higher taxonomic levels to represent species shows good potential as a surrogate but only in species-poor genera or families. The use of species density to determine congruency and select surrogates is likely to produce different results to those produced by community similarity. Furthermore, when selecting surrogates from congruency assessments an optimal p-value greater than 0.75 should be required. Below this value, the relationship is likely to be weak and if used as a surrogate misinterpretation may occur. / Thesis (M.Sc.)-University of KwaZulu-Natal, Pietermaritzburg, 2006.

M.Sc. (Zoology) / The Limpopo Province covers an area of 12.46 million hectares and these accounts for 10.2 per cent of the total land area of the Republic of South Africa. The province is endowed with abundant agricultural resources and it is one of the country’s prime agricultural regions noted for the production of fruits and vegetables, cereals, tea, and sugar. A key feature of the agricultural industry of Limpopo Province is its dualism. There are two distinct types of agricultural production systems. The large scale commercial farming system occupies approximately 70% of the total land area. The smallholder farms are located mostly in the former homeland areas and they cover approximately 30% of the provincial land surface area. The town of Thohoyandou, with its surrounding villages, is the area of greatest human concentration in the Luvuvhu Catchment and subsistence farming is about a third of the total agricultural component. It is important to study the effects of agricultural inputs (e.g. fertilizers and sediment loads) on aquatic ecosystems in order to fully understand the processes involved of these stresses on aquatic ecosystems. Knowledge of these impacts toward the environment and human health is often limited due to lack of capacity building, especially among small scale farmers. Ten bio-monitoring sites were studied on five systems in the Vhembe district. The sites were sampled during the low flow period of November 2011 and the high flow period of April 2012. Sampling sites were selected to present conditions in the Mutale, Mutshindudi and Tshinane Rivers upstream and downstream of the potential influence of small scale agricultural activities...