Nesta tese foi estudado o transporte de partículas na borda do plasma confinado magneticamente em tokamaks a partir de um modelo para ondas de deriva proveniente de flutuaçõoes eletrostáticas geradas pela não uniformidade do plasma. Para investigar esse problema, consideramos o modelo com duas ondas de deriva, que possui uma complexa dinâmica não linear onde podemos encontrar tanto transporte anômalo quanto transporte difusivo. Para a encontras no plano de fases as Estruturas Lagrangianas Coerentes (ELCs) e os jatos, foram confeccionados mapas de Poincaré, diagramas de expoente de Lyapunov a tempo finito, diagramas de deslocamento quadrático, diagramas de autocorrelação da velocidade e o diagrama de retorno. Para avaliar o impacto dessas ELCs no transporte de partículas foram analisados a série temporal do desvio padrão médio, da dispersão relativa e dos saltos dentro do mapa de Poincar´e e também foram confeccionados histogramas com a distribuição desses saltos. Foi encontrado que, com duas ondas de deriva e para uma determinada combinação de parâmetros, surgem correntes de jato, que persistem por longos períodos, imersas na região caótica. Verificamos que, assim como nas ilhas, a região interna às correntes de jato são inacessíveis às ELCs. Também foi encontrado que, quando existe uma corrente de jato, o transporte observado na região caótica não é simétrico com uma pequena deriva na direção contraria ao jato. Esse fenômeno observado ocorre em contrapartida ao caso típico de sistemas com mistura em que as ELCs tem acesso a todo o plano de fase e o transporte é difusivo. / In this thesis we studied the particle transport in the edge of magnetically confined plasma in tokamaks using a model of drift waves due to electrostatic fluctuations generated by the non-uniformity of the plasma. To investigate this issue, we consider the model with two drift waves, which has a complex nonlinear dynamics where we can find both anomalous and diffusive transport. To find the Lagrangian Coherent Structures (LCSs) and the jets, we used Poincaré maps, Finite time Lyapunov exponent diagrams, quadratic displacement diagrams, autocorrelation velocity diagrams and return displacement diagram. To evaluate the impact of LCSs in the transport of particles, we analyzed the time series of both average standard deviation and relative dispertion and also histograms of the distribution of these jumps. It was found that, with two drift waves and for a given combination of parameters, a jet streams appear in the phase space and persist for long periods of time immersed in the chaotic region. We found that, as well as on the islands, the inner region of the jet streams are inaccessible to LCSs. It was also found that when there is a jet stream, the transport observed in the chaotic region is not symmetrical and have a small drift in the opposite direction to the jet. This phenomenon is observed in contrast to the typical case of systems with mixing in wich the LCSs have access to all the phase space and the trasnport is diffusive.

In many problems in dynamical systems one is interested in the identification of sets which have qualitatively different fates. The finite-time Lyapunov exponent (FTLE) method is a general and equation-free method that identifies codimension-one sets which have a locally high rate of stretching around which maximal exponential expansion of line elements occurs. These codimension-one sets thus act as transport barriers. This geometric framework of transport barriers is used to study various problems in phase space transport, specifically problems of separation in flows that can vary in scale from the micro to the geophysical. The first problem which we study is of the nontrivial motion of inertial particles in a two-dimensional fluid flow. We use the method of FTLE to identify transport barriers that produce segregation of inertial particles by size. The second problem we study is the long range advective transport of plant pathogen spores in the atmosphere. We compute the FTLE field for isobaric atmospheric flow and identify atmospheric transport barriers (ATBs). We find that rapid temporal changes in the spore concentrations at a sampling point occur due to the passage of these ATBs across the sampling point. We also investigate the theory behind the computation of the FTLE and devise a new method to compute the FTLE which does not rely on the tangent linearization. We do this using the 925 matrix of a probability density function. This method of computing the geometric quantities of stretching and FTLE also heuristically bridge the gap between the geometric and probabilistic methods of studying phase space transport. We show this with two examples. / Ph. D.

In this work, flow through synthetic arrangements of contacting spheres is studied as a model problem for porous media and packed bed type flows. Direct numerical simulations are performed for moderate pore Reynolds numbers in the range, 10 ≤ Re ≤ 600, where non-linear porescale flow features are known to contribute significantly to macroscale properties of engineering interest. To first choose and validate appropriate computational models for this problem, the relative performance of two numerical approaches involving body conforming and non-conforming grids for simulating porescale flows is examined. In the first approach, an unstructured solver is used with tetrahedral meshes, which conform to the boundaries of the porespace. In the second approach, a fictitious domain formulation (Apte et al., 2009. J Comput. Phys. 228 (8), 2712-2738) is used, which employs non-body conforming Cartesian grids and enforces the no-slip conditions on the pore boundaries implicitly through a rigidity constraint force. Detailed grid convergence studies of both steady and unsteady flow through prototypical arrangements of spheres indicate that for a fixed level of uncertainty, significantly lower grid densities may be used with the fictitious domain approach, which also does not require complex grid generation techniques. Next, flows through both random and structured arrangements of spheres are simulated at pore Reynolds numbers in the steady inertial ( 10 ≲ Re ≲ 200) and unsteady inertial (Re ≈ 600) regimes, and used to analyze the characteristics of porescale vortical structures. Even at similar Reynolds numbers, the vortical structures observed in structured and random packings are remarkably different. The interior of the structured packings are dominated by multi-lobed vortex rings structures that align with the principal axes of the packing, but perpendicular to the mean flow. The random packing is dominated by helical vortices, elongated parallel to the mean flow direction. The unsteady dynamics observed in random and structured arrangements are also distinct, and are linked to the behavior of the porescale vortices. Finally, to investigate the existence and behavior of transport barriers in packed beds, a numerical tool is developed to compute high resolution finite-time Lyapunov exponent (FTLE) fields on-the-fly during DNS of unsteady flows. Ridges in this field are known to correspond to Lagrangian Coherent Structures (LCS), which are invariant barriers to transport and form the skeleton of time dependent Lagrangian fluid motion. The algorithm and its implementation into a parallel DNS solver are described in detail and used to explore several flows, including unsteady inertial flow in a random sphere packing. The resulting FTLE fields unambiguously define the boundaries of dynamically distinct porescale features such as counter rotating helical vortices and jets, and capture time dependent phenomena including vortex shedding at the pore level. / Graduation date: 2013

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L’étude des processus physiques d’un système d’upwelling est essentielle pour comprendre sa variabilité actuelle et ses changements passés et futurs. Cette thèse présente une étude interdisciplinaire du système d’upwelling côtier à partir de différentes données acquises par satellite, l’accent étant mis principalement sur le système d’upwelling d’Afrique du Nord-Ouest (NWA). Cette étude interdisciplinaire aborde (1) le problème de l’identification et de l’extraction automatiques du phénomène d’upwelling à partir d’observations satellitaires biologiques et physiques. (2) Une étude statistique de la variation spatio-temporelle de l’upwelling de la NWA tout au long de son extension et de ses différents indices d’upwelling. (3) Une étude des relations non linéaires entre le mélange de surface et l’activité biologique dans les régions d’upwelling. (4) études lagrangiennes de tourbillons cohérents; leurs propriétés physiques et identification automatique. (5) L’étude des transports effectués par les tourbillons lagrangiens de la NWA Upwelling et leur impact sur l’océan. / Studying physical processes of an upwelling system is essential to understand its present variability and its past and future changes. This thesis presents an interdisciplinary study of the coastal upwelling system from different satellite acquired data, with the main focus placed on the North West African (NWA) upwelling system. This interdisciplinary study covers (1) the problem of the automatic identification and extraction of the upwelling phenomenon from biological and physical satellite observations. (2) A statistical study of the spatio-temporal variation of the NWA upwelling throughout its extension and different upwelling indices. (3) A Study of the nonlinear relationships between the surface mixing and biological activity in the upwelling regions. (4) Lagrangian studies of coherent eddies; their physical properties and automatic identification. (5) The study of transport made by Lagrangian eddies off the NWA Upwelling and their impact on the open ocean. [...]