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Real time Spaun on SpiNNaker : functional brain simulation on a massively-parallel computer architectureMundy, Andrew January 2017 (has links)
Model building is a fundamental scientific tool. Increasingly there is interest in building neurally-implemented models of cognitive processes with the intention of modelling brains. However, simulation of such models can be prohibitively expensive in both the time and energy required. For example, Spaun - "the world's first functional brain model", comprising 2.5 million neurons - required 2.5 hours of computation for every second of simulation on a large compute cluster. SpiNNaker is a massively parallel, low power architecture specifically designed for the simulation of large neural models in biological real time. Ideally, SpiNNaker could be used to facilitate rapid simulation of models such as Spaun. However the Neural Engineering Framework (NEF), with which Spaun is built, maps poorly to the architecture - to the extent that models such as Spaun would consume vast portions of SpiNNaker machines and still not run as fast as biology. This thesis investigates whether real time simulation of Spaun on SpiNNaker is at all possible. Three techniques which facilitate such a simulation are presented. The first reduces the memory, compute and network loads consumed by the NEF. Consequently, it is demonstrated that only a twentieth of the cores are required to simulate a core component of the Spaun network than would otherwise have been needed. The second technique uses a small number of additional cores to significantly reduce the network traffic required to simulated this core component. As a result simulation in real time is shown to be feasible. The final technique is a novel logic minimisation algorithm which reduces the size of the routing tables which are used to direct information around the SpiNNaker machine. This last technique is necessary to allow the routing of models of the scale and complexity of Spaun. Together these provide the ability to simulate the Spaun model in biological real time - representing a speed-up of 9000 times over previously reported results - with room for much larger models on full-scale SpiNNaker machines.
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The Ordinal Serial Encoding Model: Serial Memory in Spiking NeuronsChoo, Feng-Xuan January 2010 (has links)
In a world dominated by temporal order, memory capable of processing, encoding and subsequently recalling ordered information is very important. Over the decades this memory, known as serial memory, has been extensively studied, and its effects are well known. Many models have also been developed, and while these models are able to reproduce the behavioural effects observed in human recall studies, they are not always implementable in a biologically plausible manner. This thesis presents the Ordinal Serial Encoding model, a model inspired by biology and designed with a broader view of general cognitive architectures in mind. This model has the advantage of simplicity, and we show how neuro-plausibility can be achieved by employing the principles of the Neural Engineering Framework in the model’s design. Additionally, we demonstrate that not only is the model able to closely mirror human performance in various recall tasks, but the behaviour of the model is itself a consequence of the underlying neural architecture.
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The Ordinal Serial Encoding Model: Serial Memory in Spiking NeuronsChoo, Feng-Xuan January 2010 (has links)
In a world dominated by temporal order, memory capable of processing, encoding and subsequently recalling ordered information is very important. Over the decades this memory, known as serial memory, has been extensively studied, and its effects are well known. Many models have also been developed, and while these models are able to reproduce the behavioural effects observed in human recall studies, they are not always implementable in a biologically plausible manner. This thesis presents the Ordinal Serial Encoding model, a model inspired by biology and designed with a broader view of general cognitive architectures in mind. This model has the advantage of simplicity, and we show how neuro-plausibility can be achieved by employing the principles of the Neural Engineering Framework in the model’s design. Additionally, we demonstrate that not only is the model able to closely mirror human performance in various recall tasks, but the behaviour of the model is itself a consequence of the underlying neural architecture.
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Modelling Low Dimensional Neural Activity / Modellering av lågdimensionell neural aktivitetWärnberg, Emil January 2016 (has links)
A number of recent studies have shown that the dimensionality of the neural activity in the cortex is low. However, what network structures are capable of producing such activity is not theoretically well understood. In this thesis, I discuss a few possible solutions to this problem, and demonstrate that a network with a multidimensional attractor can give rise to such low dimensional activity. The network is created using the Neural Engineering Framework, and exhibits several biologically plausible features, including a log-normal distribution of the synaptic weights. / Ett antal nyligen publicerade studier has visat att dimensionaliten för neural aktivitet är låg. Dock är det inte klarlagt vilka nätverksstrukturer som kan uppbringa denna typ av aktivitet. I denna uppsats diskuterar jag möjliga lösningsförslag, och demonstrerar att ett nätverk med en flerdimensionell attraktor ger upphov till lågdimensionell aktivitet. Nätverket skapas med hjälp av the Neural Engineering Framework, och uppvisar ett flertal biologiskt trovärdiga egenskaper. I synnerhet är fördelningen av synapsvikter log-normalt fördelad.
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