The MANIMEA $ rm ( underline{MA}nurial underline{NI}trogen underline{M}anagement{:} underline{E}nvironmental underline{A}spects)$ model is a one-dimensional dynamic model that simultaneously simulates nitrogen transformations (volatilization, net mineralization-immobilization, and denitrification), nitrogen transport (runoff and leaching), plant uptake, and adsorption in homogeneous, unsaturated soils. The simulated system is divided into two components: the applied manure layer and the soil. The model describes the transformation processes occurring in both components separately. It is also capable of accounting for both micro and macroporous flows. In addition, the simulation can be done for time steps shorter than 1 day. / The model was developed to be interactive and user-friendly and was constructed on a modular basis using Microsoft FORTRAN PowerStation$ sp circler$ as a compiler. It can be run on an IBM$ sp circler$ or IBM compatible microcomputer with a minimum requirement of a 386 microprocessor with 4 MB RAM. This model was developed as a nitrogen management-oriented model. However, it can also be used to gain further understanding of nitrogen processes for research and teaching purposes. / The accuracy of the stimulation was enhanced by taking into account moisture and temperature variation and distribution in the soil. The SWACROP and the HEAT programs were integrated into the MANIMEA model to generate transient moisture and temperature profiles, respectively. The Numerical Method Of Lines (NMOL) technique, which implements finite difference method, was used to numerically solve the partial differential equations in the model. / Generally, the results generated by the MANIMEA model using the parameters from literature agreed with the results obtained by analytical solutions and from experiments. It was found that the model is highly sensitive to the volatilization and net mineralization rate constants $(K sb{v}$ and $K sb{m}).$ The study showed that the MANIMEA model can be implemented to evaluate nitrogen transformations, transport, and plant uptake for a wide range of climatic and soil conditions and organic type of wastes. Such a tool can contribute to the protection of our environment through a better management of organic nitrogen fertilizer and a better understanding of the nitrogen processes.

Five species, Acacia karroo, A. robusta, A. nilotica, A. sieberana and A. tortilis, were inoculated with Rhizobium and grown in potted sand in a temperature controlled greenhouse. After six months, results showed a higher percentage plant nitrogen for all five species when inoculated plants were compared to uninoculated controls. Inoculated treatments of A. karroo and A. sieberana had the greatest growth in shoot length and biomass. Acacia robusta showed the highest nitrogenase activity when nodules were tested using acetylene reduction methods. Inoculants of A. tortilis showed the poorest growth for all parameters measured. A. karroo and A. nilotica were studied at a field site at Ashburton, 15km east of Pietermaritzburg. Acacia karroo and A. nilotica had similar mean percentage leaf nitrogen, but A. karroo had a significantly higher mean percentage stern nitrogen than A. nilotica. Rainfall, canopy throughfall and stemflow from A. karroo and A. nilotica were collected in late spring and examined for inorganic nitrogen content. Acacia nilotica yielded the highest nitrate levels in both throughfall and stemflow samples. Acacia karroo produced lower nitrate concentrations in samples of both throughfall and stemflow, than was found in rainfall. Both A. nilotica and A. karroo exhibited higher concentrations of ammonium in samples of throughfall and stemflow as compared to levels. Soil analyses yielded highest levels of organic nitrogen at the surface (0 - 5 cm) but this decreased significantly at 20 cm deep. Surface organic nitrogen was highest under A. karroo canopies and lowest in open grassland. At 20 cm, there was little difference in organic nitrogen content between soils sampled from open patches and those under canopies of A. nilotica or A. karroo. Nitrate showed little variation with species, but highest levels were found in the top five centimetres and levels were higher under grasslands than under canopies. Ammonium showed no significant differences between different depths but was higher in open grassland sites than under canopies. No pattern could be found to relate tree size to soil organic nitrogen content. / Thesis (M.Sc.)-University of Natal, Pietermaritzburg, 1995.

The ocean is the most extended biome present on our planet. Recent decades have seen a dramatic increase in the number and gravity of threats impacting the ocean, including discharge of pollutants, cultural eutrophication and spread of alien species. It is essential therefore to understand how different impacts may affect the marine realm, its life forms and biogeochemical cycles. The marine nitrogen cycle is of particular importance because nitrogen is the limiting factor in the ocean and a better understanding of its reaction mechanisms and regulation is indispensable. Furthermore, new nitrogen pathways have continuously been described. The scope of this project was to better constrain cause-effect mechanisms of microbially mediated nitrogen pathways, and how these can be affected by biotic and abiotic factors. This thesis demonstrates that meiofauna, the most abundant animal group inhabiting the world’s seafloors, considerably alters nitrogen cycling by enhancing nitrogen loss from the system. In contrast, larger fauna such as the polychaete Marenzelleria spp. enhance nitrogen retention, when they invade eutrophic Baltic Sea sediments. Sediment anoxia, caused by nutrient excess, has negative consequences for ecosystem processes such as nitrogen removal because it stops nitrification, which in turn limits both denitrification and anammox. This was the case of Himmerfjärden and Byfjord, two estuarine systems affected by anthropogenic activities, such as treated sewage discharges. When Byfjord was artificially oxygenated, nitrate reduction mechanisms started just one month after pumping. However, the balance between denitrification and nitrate ammonification did not favor either nitrogen removal or its retention. Anoxia is also present in aggregates of the filamentous cyanobacteria Nodularia spumigena. This thesis shows that even in fully oxic waters, millimetric aggregates can host anaerobic nitrogen processes, with clear implications for the pelagic compartment. While the thesis contributed to our knowledge on marine nitrogen cycling, more data need to be collected and experiments performed in order to understand key processes and regulation mechanisms of element cycles in the ocean. In this way, stakeholders may follow and take decisions in order to limit the continuous flow of human metabolites and impacts on the marine environment. / <p>At the time of the doctoral defense, the following paper was unpublished and had a status as follows: Paper 2: Manuscript.</p>

We investigated oceanic dissolved inorganic nitrogen (N) dynamics, focussing on processes removing bio-available N and ultimately affecting primary productivity, in sulfidic hydrothermal vent fluids discharging from the subsurface on the Juan de Fuca Ridge (northeast Pacific Ocean) and in anoxic bottom waters of Saanich Inlet, a British Columbia fjord, using a combination of geochemical and molecular microbial ecology techniques. During episodes of mixing with oxygenated sea-water, both systems can switch from anoxic to oxic conditions. Strong inter-site variations in the concentrations and δ15N of ammonium (NH4+) in high-T fluids suggested different N sources (deep-sea nitrate (NO3-) versus organic sediments) for hydrothermally discharged NH4+. Increase in the isotopic composition of NO3- (δ15N and δ18O), concomitant with decreased [NO3-], indicated NO3- assimilation or denitrification in the subsurface. NO3- isotope anomalies, i.e. deviations from the 15N:18O isotopic enrichment of 1:1 in marine environments, were observed and confirmed the occurrence of NO3- regeneration in vent fluids. Denitrification was the dominant N-loss pathway, suggesting that bacterial denitrification out-competes anaerobic NH4+ oxidation (anammox) in diffuse hydrothermal vent waters. The diversity of denitrifying bacteria encoding the nirS-form of nitrite reductase was low in vent fluids. Quantitative polymerase chain reaction (qPCR) analysis revealed that denitrifiers accounted for up to 38% (nirk-encoding γ-proteobacteria of the SUP05 cluster) and 8% (nirS-encoding bacteria) of the total bacterial abundance. Furthermore, nirS gene operational taxonomic units from two vent fields clustered into different groups in the phylogenetic tree, suggesting a link between denitrifying bacterial community membership and small-scale geographic isolation and/or fluid physico-chemical properties. Significant correlations existed between fixed N-loss rates and in-situ dissolved inorganic N deficits in the fluids. Based on our rate measurements, and on published data on hydrothermal fluid fluxes and residence times, we estimated that up to ~10 Tg N yr−1 could be removed globally in the subsurface biosphere. In Saanich Inlet, a gradual increase in both the δ15N and δ18O of NO3- associated with a decrease in [NO3-] and an increase in biological excess N2, was observed after bottom water renewal events in fall 2008, following NO3- consumption by denitrifiers in an expanding suboxic zone. N-to-O negative NO3- isotope anomalies were observed in surface and bottom waters, confirming the occurrence of NO3- regeneration and/or external NO3- input. Closed and open-system-model derived NO3- isotope effects in anoxic bottom waters were lower (as low as ~11‰) than the ~25‰ for water column denitrification reported in other studies, suggesting that ~50% of the denitrification could occur, with a highly suppressed isotope effect, in the sediments of the Inlet. / Graduate

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Diss. (sammanfattning) Uppsala : Sveriges lantbruksuniv., 2003. / Härtill 4 uppsatser.