No / We have investigated the surface localisation of the phosphotransferase system protein HPr in the equine pathogen Streptococcus equi subsp. equi using immunogold localisation and transmission electron microscopy. Like the LppC acid phosphatase lipoprotein, a reference surface antigen, the S. equi HPR could be clearly detected on the surfaces of intact cells. This study is consistent with previous reports that some streptococcal HPr is cell surface associated and suggests that the extracytoplasmic mobilisation and transfer of phosphate groups by streptococci warrant further investigation.

Bakterien wie Escherichia coli sind immer wieder wechselnden Umweltbedingungen und Nährstoffen ausgesetzt. Aus diesem Grund zeigen sie eine starke Regulation des Kohlenstoff-Metabolismus, um stets die am besten geeignete Nährstoffquelle nutzen zu können. Das Glukose-Phosphotransferase-System (PTS) stellt in E.coli das Hauptaufnahmesystem für Glukose dar und unterliegt damit einer besonderen Regulation. Die Untersuchung der Regulation des Glukose-PTS durch das kleine regulatorische Peptid SgrT war ein Hauptaspekt in dieser Arbeit. Das so genannte SgrRST-System wurde bereits von anderen Arbeitsgruppen als verantwortlich für die Regulation der Expression und Aktivität des Glukose-Transportproteins EIICBGlc (Gen ptsG) unter Glukose-6-Phosphatstress identifiziert. Sie konnten einen durch SgrR aktivierten und durch sgrS (sRNA) vermittelten spezifischen Abbau der ptsG-mRNA zeigen und zudem das von sgrS kodierte Protein SgrT nachweisen (Wadler und Vanderpool, 2007). Dabei waren der Mechanismus und die Funktion von SgrT bei der Regulation des Glukose-PTS bislang unklar. In dieser Arbeit konnte zum ersten Mal eine direkte Protein-Protein-Wechselwirkung zwischen SgrT und dem Membranprotein EIICBGlc durch in vitro- und in vivo-Methoden nachgewiesen werden. Dabei wurde nicht nur der Nachweis einer Wechselwirkung erbracht, sondern es konnte auch auf Seiten des EIICBGlc eine für die Interaktion der beiden Proteine essentielle Region identifiziert werden. Im hoch konservierten KTPGRED-Motiv des Linkers, welcher die membranständige EIICGlc- und die cytoplasmatische EIIBGlc-Domäne flexibel miteinander verbindet, wurden die Aminosäuren T383, P384, G385, R386 und E387 als Interaktionspartner für SgrT nachgewiesen. Damit wurde der in allen Enterobakterien vorkommenden Sequenz des Linkers in den Glukose- und N-Acetyl-Glukosamin-spezifischen Transportproteinen zum ersten Mal eine Funktion zugewiesen. Zudem wurde ein Modell entwickelt, welches die Funktionsweise von SgrT verdeutlicht. Durch die Bindung des Linkers und die damit verbundene Verhinderung der zum Glukose-Transport notwendigen Konformationsänderung des EIICBGlc, setzt SgrT die Transportaktivität des Membranproteins unter Glukose-6-Phosphatstress drastisch herab. Im Rahmen des FORSYS-Partner Projektes wurde zudem die Auswirkung des SgrRST-Systems auf die Aufrechterhaltung der metabolischen Balance von E.coli in Fermentationsversuchen untersucht. Ein zweites Projekt dieser Arbeit befasste sich mit der Auswirkung der Expression eines chromosomal kodierten EIICBGlc-His auf das Wachstum verschiedener Stämme. Es konnte erfolgreich ein Stamm mit einem ptsGHis-Gen im Chromosom konstruiert und in verschiedenen Versuchen auf z.B. Transportaktivität und Wachstum getestet werden. Des Weiteren wurde ein Stamm mit einem chromosomal kodierten EIICBGlc-His unter der Kontrolle des tacPO kloniert. Durch gezielte IPTG-Zugabe ist das Expressionslevel einstellbar und könnte so in verschiedenen Versuchsansätzen zur Analyse der Auswirkung auf den Metabolismus der Zelle dienen. Auf Grund einer geringen Transportaktivität dieses Stammes wurde eine Suppressionsmutante isoliert, welche einen verstärkten Transport zeigt, bei der sich jedoch das Expressionslevel des EIICBGlc-His nicht mehr vollständig herabsetzen lässt. Eine Optimierung beider Stämme ist demnach erforderlich.

No / We have investigated the surface localisation of the phosphotransferase system protein HPr in the equine pathogen Streptococcus equi subsp. equi using immunogold localisation and transmission electron microscopy. Like the LppC acid phosphatase lipoprotein, a reference surface antigen, the S. equi HPR could be clearly detected on the surfaces of intact cells. This study is consistent with previous reports that some streptococcal HPr is cell surface associated and suggests that the extracytoplasmic mobilisation and transfer of phosphate groups by streptococci warrant further investigation.

Thesis (Ph. D.)--University of Washington, 1997. / Vita. Includes bibliographical references (leaves [176]-179).

Listeria monocytogenes est une bactérie à Gram+, ubiquiste, pathogène intracellulaire d’origine alimentaire, responsable chez l’homme, de nombreuses infections telles que les infections foeto-maternelles, des méningo-encéphalites et des septicémies. La bactérie utilise préférentiellement le glucose qui est transporté via le système phosphoenolpyruvate:sucre phsosphotransferase (PTS) et des perméases non-PTS. Les deux principaux transporteurs de glucose chez L. monocytogenes seraient des PTS de la classe mannose. Le premier est codé par l’opéron manLMN (man) et le deuxième, par l’opéron mpoABCD (mpo). Nous avons, dans un premier temps, mis en évidence le transport de glucose par ces PTS chez L. monocytogenes et aussi identifier d’autres transporteurs non-PTS de glucose. Des tests de croissance en milieu minimum (MM) additionné de glucose et des tests de consommation de glucose ont permis de montrer que les mutants ΔmanL (manL code pour l’EIIABMan) et ΔmanM (manM code pour l’EIICMan) utilisent moins vite le glucose que la souche sauvage AML73 ou EGDe (3 à 4 fois moins vite). Le mutant ΔmpoA (mpoA code pour l’EIIAMpo) montre un phénotype similaire à la souche sauvage tandis que le mutant ΔmpoB (mpoB code pour l’EIIBMpo) utilise 4 à 5 fois moins vite le glucose que la souche sauvage. Des tests de qRT-PCR ont par ailleurs permis de montrer que la délétion du gène mpoA permet une expression constitutive de l’opéron man tandis que la délétion du gène mpoB entraîne une inhibition de l’expression de cet opéron. Nous avons aussi montré que l’opéron man est induit par le glucose et l’opéron mpo est exprimé constitutivement. Le PTSMan est le principal système de transport de glucose chez L. monocytogenes et le PTSMpo pourrait fonctionner comme un senseur de glucose qui en présence de ce sucre stimule l’expression de l’opéron man en régulant l’activité de ManR. Le mutant ΔptsI (ptsI code pour la protéine générale EI du PTS) utilise 8 à 10 fois moins vite le glucose que la souche sauvage et présente une très faible expression de l’opéron man. L’utilisation du glucose (bien que faible) par le mutant ΔptsI permet d’affirmer qu’il existerait des transporteurs non-PTS qui permettraient à ce mutant d’utiliser le glucose. Des tests de complémentation hétérologue dans la souche E. coli LJ140 (incapable de transporter le glucose) ont permis de montrer que les trois protéines GlcU (GlcU1, GlcU2 et GlcU3, identifiées par homologie de séquences aux GlcU d’autres firmicutes) permettent le transport de glucose chez L. monocytogenes mais avec une très faible affinité. Un rôle potentiel du PTS et des transporteurs non-PTS dans la régulation de PrfA a également été mis en évidence par des tests de dosage β-D-glucuronidase à partir de cultures bactériennes réalisées en milieux liquides ou sur géloses et aussi par des tests de qRT-PCR (pour l’expression des gènes actA et hly). Ces tests ont été réalisés à partir de la souche L. monocytogenes AML73 (portant la fusion Phly-gus) et des mutants ΔmanL, ΔmanM, ΔmpoB, ΔmpoA, ΔptsI et glcU (construits dans cette souche). Les mutations manL, manM, mpoB, ptsI entraînent une augmentation de l’activité de PrfA (de 2 à 14 fois) et une augmentation de l’expression des gènes de virulence PrfA-dépendants (hly et actA) est également observée dans les mutants ΔmanL, ΔmanM et ΔmpoB. Les mutations glcU et mpoA ne montrent aucun effet sur l’activité de PrfA. Les mutants montrant une forte activité de PrfA contiennent peu ou pas de protéine EIIABMan qui est supposée jouer un rôle dans la régulation de l’activité de PrfA par le glucose. L’effet des mutations PTS observé sur l’expression des gènes de virulence dépend de PrfA car cet effet disparaît quand le gène prfA est délété dans les mutants ΔmanL, ΔmanM et ΔmpoB. Les mutations montrant un effet sur l’activité de PrfA ont également été étudiées in vitro par des infections des cellules épithéliales (Caco-2 et Jeg-3) avec les différents mutants et également in vivo dans la souris. La délétion du gène ptsI montre un effet dans l’infection plus particulièrement dans l’entrée des bactéries dans les cellules / L. monocytogenes is a ubiquitous foodborne pathogenic Gram-positive bacterium, which can multiply in host cells and infect humans causing septicemia, spontaneous abortion and méningoencephalitis. This bacterium transports glucose via phosphoenolpyruvate:sugar phosphotransferase systems (PTS) and non-PTS permeases. Two major glucose-transporting PTSs belong to the mannose class. One is encoded by the manLMN (man) operon and the second by the mpoABCD (mpo) operon. One goal was to study the transport of glucose by the proteins encoded by these operons and to identify non-PTS glucose transporters. Growth studies in MM supplemented with glucose and glucose consumption assays with several mutants revealed that deletion of manL (encodes EIIABMan) or manM (encodes EIICMan) significantly slowed glucose utilization (3- to 4-fold) compared to the WT AML73 or EGDe strain. Deletion of mpoA (encodes EIIAMpo) had no significant effect on glucose utilization (same phenotype as the WT) whereas deletion of mpoB (encodes EIIBMpo) significantly slowed glucose utilization (4- to -5 fold). By using qRT-PCR, we show that expression of the man operon is induced by glucose, whereas the mpo operon is expressed constitutively. Nevertheless, deletion of mpoA causes constitutive man operon expression whereas deletion of mpoB inhibits it. The PTSMpo therefore functions as a constantly synthesized glucose sensor regulating man operon expression. Deletion of ptsI (encodes the general PTS component EI) also inhibits man expression and the ΔptsI mutant was most strongly impeded in glucose utilization. The residual glucose uptake probably owes to three GlcU-like non-PTS transporters. The successful heterelogous complementation of the E. coli LJ140 strain, wich is unable to transport glucose, suggests that the L. monocytogenes GlcU proteins, GlcU1, GlcU2 and GlcU3 (identified by sequences homology to GlcU proteins in other firmicutes) are indeed capable of transporting glucose.A potential role of PTS and non-PTS components in PrfA regulation was studied in the L. monocytogenes AML73 strain (contains a Phly-gus fusion) and in the ΔmanL, ΔmanM, ΔmpoB, ΔmpoA, ΔptsI, glcU mutants derived from it. For that purpose, I carried out β-D-glucuronidase activity tests with bacteria grown either in liquid or on solid medium and qRT-PCR experiments (expression of actA and hly genes). Interestingly, deletion of ptsI, manL, manM and mpoB caused elevated PrfA activity (2- to -14 fold) and elevated expression of virulence gene expression (actA and hly) in the ΔmanL, ΔmanM and ΔmpoB mutants was observed. Nevertheless, glcU inactivation and mpoA deletion had no effect on PrfA activity. The elevated PrfA activity disappeared when the prfA gene was also deleted in the ΔmanL, ΔmanM and ΔmpoB mutants, confirming that the stimulatory effect of the various mutations on virulence gene expression is PrfA-dependent. All mutants exhibiting elevated virulence gene expression contain no or only little unphosphorylated EIIABMan, which we therefore suspect to play a major role in glucose-mediated PrfA inhibition. The effect of the PTS mutations was also tested in in vitro host cells infection assays (Caco-2, Jeg-3 cells) and in an in vivo mouse model. Deletion of ptsI led to elevated infection of the host cells, which probably owes to the elevated synthesis of the InlA protein.

京都大学 / 0048 / 新制・課程博士 / 博士(農学) / 甲第21378号 / 農博第2302号 / 新制||農||1070(附属図書館) / 学位論文||H30||N5151(農学部図書室) / 京都大学大学院農学研究科食品生物科学専攻 / (主査)教授 橋本 渉, 教授 入江 一浩, 教授 保川 清 / 学位規則第4条第1項該当 / Doctor of Agricultural Science / Kyoto University / DFAM

Aggregatibacter actinomycetemcomitans is a Gram negative bacterium found exclusively in the mammalian oral cavity where it resides in the gingival crevice, the space between the tooth and gum tissue. Though it has historically been considered a common commensal organism, it is now appreciated that A. actinomycetemcomitans is an opportunistic pathogen associated with the diseases periodontitis and endocarditis. To cause infection, A. actinomycetemcomitans must interact and compete with neighboring bacteria for space and nutrients, though little is known about the physiology it employs within the gingival crevice. Using A. actinomycetemcomitans grown in a chemically defined medium containing carbon sources found in vivo, I use transcriptome analyses and growth studies to show that A. actinomycetemcomitans preferentially utilizes lactate over the phosphotransferase system (PTS) sugars glucose and fructose. Additionally, the presence of lactate or pyruvate inhibits the transport and metabolism of these sugars in a post-transcriptionally controlled process I have termed PTS substrate exclusion. Since lactate is an energetically inferior carbon source, PTS substrate exclusion appears to be a carbon resource partitioning mechanism that allows A. actinomycetemcomitans to avoid competition for energetically favorable sugars with other species, and I propose a model to describe this phenomenon. To begin to understand the mechanism of PTS substrate exclusion, I examine the first step of the proposed model by purifying and characterizing the L-lactate dehydrogenase (LctD) from A. actinomycetemcomitans. I demonstrate that, unlike other studied lactate dehydrogenases, the LctD from A. actinomycetemcomitans does not exhibit feedback inhibition in the presence of physiologically relevant concentrations of pyruvate, which supports my hypothesis that elevated intracellular pyruvate levels inhibit the PTS. The results of my studies provide insight into a new regulatory mechanism governing carbon utilization in this bacterium. / text

Escherichia coli (E. coli) is an attractive host for production of recombinant proteins, since it generally provides a rapid and economical means to achieve high product quantities. In this thesis, the impact of the glucose uptake rate on the production of recombinant proteins was studied, aiming at improving and optimising production of recombinant proteins in E. coli. E. coli can be cultivated to high cell densities in bioreactors by applying the fed-batch technique, which offers a means to control the glucose uptake rate. One objective of this study was to find a method for control of the glucose uptake rate in small-scale cultivation, such as microtitre plates and shake flasks. Strains with mutations in the phosphotransferase system (PTS) where used for this purpose. The mutants had lower uptake rates of glucose, resulting in lower growth rates and lower accumulation of acetic acid in comparison to the wild type. By using the mutants in batch cultivations, the formation of acetic acid to levels detrimental to cell growth could be avoided, and ten times higher cell density was reached. Thus, the use of the mutant strains represent a novel, simple alternative to fed-batch cultures.   The PTS mutants were applied for production of integral membrane proteins in order to investigate if the reduced glucose uptake rate of the mutants was beneficial for their production. The mutants were able to produce three out of five integral membrane proteins that were not possible to produce by the wild-type strain. The expression level of one selected membrane protein was increased when using the mutants and the expression level appeared to be a function of strain, glucose uptake rate and acetic acid accumulation. For production purposes, it is not uncommon that the recombinant proteins are secreted to the E. coli periplasm. However, one drawback with secretion is the undesired leakage of periplasmic products to the medium. The leakage of the product to the medium was studied as a function of the feed rate of glucose in fed-batch cultivations and they were found to correlate. It was also shown that the amount of outer membrane proteins was affected by the feed rate of glucose and by secretion of a recombinant product to the periplasm. The cell surface is another compartment where recombinant proteins can be expressed. Surface display of proteins is a potentially attractive production strategy since it offers a simple purification scheme and possibilities for on-cell protein characterisation, and may in some cases also be the only viable option. The AIDA-autotransporter was applied for surface display of the Z domain of staphylococcal protein A under control of the aidA promoter. Z was expressed in an active form and was accessible to the medium. Expression was favoured by growth in minimal medium and it seemed likely that expression was higher at higher feed rates of glucose during fed-batch cultivation. A repetitive batch process was developed, where relatively high cell densities were achieved whilst maintaining a high expression level of Z. / QC 20110608

Listeria monocytogenes transporte le cellobiose principalement via le PTS (PEP:carbohydrate phosphotransferase system). La croissance sur cellobiose induit l'expression des opérons celBCA1, celBA2 ainsi que du gène lmrg_01989, qui codent respectivement le composant soluble EIIACel1, le transporteur EIICCel1, le composant soluble EIIBCel1, les protéines EIIBCel2 et EIIACel2, et une seconde EIICCel. La croissance sur glucose réprime fortement l'expression de ces gènes. La délétion de celC1 codant l'EIICCel1 ou des deux gènes, celA1 et celA2, ralentit considérablement la consommation cellobiose. L'expression des trois unités de transcription induite par le cellobiose dépend de CelR. CelR, qui code un régulateur transcriptionnel LevR- like, est situé en aval de l'opéron bicistronique celBA2. CelR est activé par phosphorylation par EI et HPr de l'His550. En revanche, la phosphorylation de l'His823, catalysée par P~EIIBCel1 et P~EIIBCel2, inhibe l'activité de CelR. Le remplacement de l'His823 par une Ala empêchant cette phosphorylation ou la délétion des deux gènes codants les EIIAsCel ou EIIBsCel entraîne l'expression constitutive des trois unités de transcription contrôlées par CelR. Comme le glucose, le cellobiose inhibe fortement l'activité de PrfA, l'activateur des gènes de virulence. Nous avons donc cherché à tester si l'un des composants PTSCel pouvait être impliqué dans la répression de gènes de virulence. Les mutants consommant faiblement le cellobiose, présentaient une levée de la répression des gènes de virulence par le cellobiose, alors que le glucose et les autres sucres-PTS les réprimaient toujours. De manière surprenante, la délétion du gène monocistronique lmrg_00557, qui code un autre composant EIIBCel du PTS, induisait la levée de la répression des gènes de virulence médiée par toutes les sources de carbone mais n'avait aucun effet sur la consommation de glucose ou de cellobiose. Ce gène lmrg_00557 a été appelé vgiB (virulence gene inhibitor B) et la protéine correspondante, qui semble jouer un rôle majeur dans la régulation de l'activité de PrfA, EIIBVir. Cette protéine est phosphorylée par le PEP et les composants PTS EI, HPr et EIIACel2 sur le résidu cystéine-8. La complémentation du mutant ΔvgiB avec l'allèle sauvage, mais également avec l'allèle Cys8Ala, restaurait le mécanisme général de répression des gènes de virulence par les sucres, suggérant ainsi que la forme non phosphorylée de EIIBVir inhibe l'activité de PrfA. / Listeria monocytogenes transports cellobiose mainly via a PEP:carbohydrate phosphotranseferase system (PTS). Growth on cellobiose induces the expression of the celBCA1 and celBA2 operons as well as lmrG01989, which encode the soluble EIIA Cel1 and EIIB Cel1 components, the transporter EIIC Cel1 , the EIIA Cel2 and EIIB Cel2 proteins, and a second EIIC Cel , respectively. Growth on lucose strongly repressed the expression of these genes. Deletion of the EIIC Cel1 –encoding celC1 or of both, celA1 and celA2, significantly slowed cellobiose consumption. The bicistronic operon celBA2 is located downstream from celR, which codes for a LevR-like transcription activator. Expression of the three cellobiose-induced transcription units depends on CelR. The gene encoding CelR is located upstream from the bicistronic operon celBA2. CelR itself is activated via phosphorylation by EI and HPr at His550. In contrast, phosphorylation at His823, which is catalyzed by both, P~EIIB Cel1 and P~EIIB Cel2 , inhibits CelR activity. Preventing this phosphorylation by replacing His823 with Ala or deleting the two EIIA Cel – or EIIB Cel -encoding genes caused constitutive expression of all three CelR-controlled transcription units. Similar to glucose, cellobiose strongly inhibits the activity of the virulence gene activator PrfA. We therefore tested whether one of the PTS Cel components might be involved in virulence gene repression. Mutants, that exhibit slow cellobiose consumption, were relieved from cellobiose-mediated virulence gene repression, whereas glucose and other PTS-sugars still repressed them. Strikingly, deletion of the presumed monocistronic lmrg_00557, which codes for another EIIB Cel -like PTS component, caused a general relief from carbon source-mediated virulence gene repression, but had no effect on cellobiose or glucose consumption. The gene lmrg_00557 was named vgiB (virulence gene inhibitor B) and the encoded protein, which seems to play a major role in PrfA regulation, was called EIIB Vir . It becomes phosphorylated by PEP and the PTS components enzyme I, HPr and EIIA Cel2 at cysteine-8. Complementation of the ΔvgiB mutant with wild-type vgiB, but also with the Cys8Ala allele restored general virulence gene repression, thus suggesting that it is the unphosphorylated form of EIIB Vir , which inhibits the activity of PrfA.

The recombinant product is secreted to the periplasm in many processes where E. coli is used as host. One drawback with secretion is the undesired leakage of the periplasmic products to the medium. The aim of this work was to find strategies to influence the periplasmic retention of recombinant products. We have focused on the role of the specific growth rate, a parameter that is usually controlled in industrial bioprocesses. The hypothesis was that the stability of the outer membrane in E. coli is gained from a certain combination of specific phospholipids and fatty acids on one side and the amount and specificity of the outer membrane proteins on the other side, and that the specific growth rate influences this structure and therefore can be used to control the periplasmic retention. We found that is possible to control the periplasmic retention by the growth rate. The leakage of the product increased as the growth rate increased. It was however also found that a higher growth rate resulted in increased productivity. This resulted in equal amounts of product inside the cells regardless of growth rate. We also showed that the growth rate influenced the outer membrane composition with respect to OmpF and LamB while OmpA was largely unaffected. The total amount of outer membrane proteins decreased as the growth rate increased. There were further reductions in outer membrane protein accumulation when the recombinant product was secreted to the periplasm. The lowered amount of outer membrane proteins may have contributed to the reduced ability for the cell to retain the product in the periplasm. The traditional way to control the growth rate is through a feed of substrate in a fed-batch process. In this work we used strains with a set of mutations in the phosphotransferase system (PTS) with a reduced uptake rate of glucose to investigate if these strains could be used for growth rate control in batch cultivations without the use of fed-batch control equipment. The hypothesis was that the lowering of the growth rate on cell level would result in the establishment of fed-batch similar conditions. This study showed that it is possible to control the growth rate in batch cultivations by using mutant strains with a decreased level of substrate uptake rate. The mutants also produced equivalent amounts of acetic acid as the wild type did in fed-batch cultivation with the same growth rate. The oxygen consumption rates were also comparable. A higher cell density was reached with one of the mutants than with the wild type in batch cultivations. It is possible to control the growth rate by the use of the mutants in small-scale batch cultivations without fed-batch control equipment. / QC 20101108