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The Stereochemistry of Pyrrolidine Ring Biosynthesis in TobaccoWigle, Ian D. 11 1900 (has links)
<p> In four separate experiments, DL-[5-3H]/DL-[5-14C]ornithine, L-[5-3H]/DL- [5- 14C]ornithine, D-[5-3H]/DL- [5- 14C]ornithine and L-[2-3H]/L-[5- 14c]ornithine were administered to intact tobacco plants (Nicotiana tabacum). Nicotine, ornithine and proline were isolated in each of these experiments. In another experiment, R-[1-2H][l ,4-14C] putrescine was administered to intact tobacco plants and nicotine was isolated. The results of these experiments are consistent with the accepted mode of biosynthesis of nicotine from ornithine via putrescine (1,4-diaminobutane), N-methylputrescine, N-methyl-4-aminobutanal and N- methyl-1-pyrrolinium ion. The 3H:14c ratios of nicotine, the distribution of tritium within nicotine as established by chemical degradation and the distribution of deuterium within nicotine as established by 2H NMR are interpreted as showing that L-ornithine is the preferred enantiomer for nicotine biosynthesis, that the decarboxylation of L-ornithine to yield putrescine proceeds with retention of configuration at the reaction site, and that the oxidation of N-methylputrescine to N-methyl-4-aminobutanal proceeds with loss of the 4(S)hydrogen. </p> <p> Contrary to earlier reports, ornithine isolated in the 3H, 14C experiments had a changed 3:14c ratio from the ornithine which was fed. These results are interpreted as showing that L-ornithine is metabolised more rapidly than is D-ornithine in the tobacco plant. </p> <p> In all 3H, 14c experiments, proline was found to contain at least a small amount of tritium. In particular, when L-[2- 3H]/L-[5-14C] ornithine served as substrate, proline was found to contain 40 + 1% of the tritium, relative to 14C, that had been present in the feeding material. This result is interpreted as showing that, contrary to earlier reports, L-ornithine can be converted into proline via either a-keto-s-aminovaleric acid or glutamic semialdehyde. Together with the 3H: 14C ratios of proline in the other experiments, the results of this work are interpreted as showing that, when DL-ornithine serves as the substrate for proline biosynthesis in tobacco, 88 + 1% of the proline arises from D-ornithine via a-oxidation, 7 + 1% of the proline
comes from L-ornithine via a-oxidation and 5 + 1% of the proline is produced from L-ornithine via s-oxidation. </p> / Thesis / Master of Science (MS)
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Foldamères peptidomimétiques à base d’urées : vers le développement de structures complexes mimes d’architectures biologiques / Peptidomimetic foldamers based on urea : towards the design of more complex structures mimicking biological architecturesFrémaux, Juliette 08 October 2013 (has links)
La fonction d’une protéine dépend dans une large mesure de sa structure tridimensionnelle, c’est pourquoi de nombreux chercheurs se sont passionnés pour la synthèse des foldamères, molécules de synthèse, bioinspirées, capables d’adopter des structures repliées bien définies. Parmi les différentes classes de foldamères, les oligourées aliphatiques étudiées dans notre laboratoire s’organisent pour former des structures hélicoïdales voisines de l’hélice α des polypeptides naturels. Pour développer des hélices fonctionnelles mimes de structures biologiques, il est intéressant de mieux comprendre les règles de leur repliement, par exemple en modifiant la nature des unités monomériques. Au cours de cette thèse, nous avons donc testé la compatibilité de la géométrie de l’hélice d’oligourée avec des résidus comportant de fortes contraintes stériques comme des groupements gem-diméthyles et des cycles pyrrolidines. En utilisant les résidus pyrrolidine, nous avons ensuite développé une nouvelle stratégie de synthèse par condensation de segments permettant de concevoir des hélices de grande taille (jusqu’à 4 nm). Grâce à cette nouvelle stratégie de synthèse et aux informations obtenues sur la stabilité des hélices nous avons pu concevoir des architectures plus complexes (structures quaternaires) résultant de l’assemblage programmé d’hélices hydrosolubles. / The biological functions of proteins are mainly correlated to their tridimensional structure. For this reason a large number of chemists are interested in the synthesis of foldamers, which are bioinspired artificial molecules possessing well-defined folded conformations. In particular, in our laboratories we focused on the study of oligourea foldamers, which form well-defined and remarkably stable helical structures, analogous to the natural polypeptides α-helix. In order to develop artificial functional helices able to mimic biological structures, it is interesting to understand the rules governing their folding, for example by comparing different residues substitution patterns. During this thesis we have investigated the compatibility of the helix geometry with residues containing steric constraints, such as gem-dimethylated units or pyrrolidine cycle. We have developed a new segment condensation strategy based on these residues, which enabled the facile synthesis of long helical segments (up to 4 nm). The use of this novel approach, combined with the information acquired on helical stability allowed us to produce more complex architectures (quaternary structures) resulting from the controlled assembly of water soluble helices.
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