Anthropogenic climate change is one of the most important factors influencing population growth and survival. Therefore, to be able to predict the effect of climate change on ecosystem composition and function, it is important to understand its effect on demographic variables, such as productivity. As a measure of productivity, I related the proportion of yearling birds captured during bird ringing in southern Sweden with mean temperature during the breeding season. I then compared the relationship between temperature and productivity for species with different traits regarding number of broods produced per season, thermal niches and migration behaviours. For most species (72%), productivity positively related to temperature during the breeding season. The relationship was strongest for species with the ability to vary the number of broods per year and species with a warmer thermal niche, whereas there was no difference between long-distance migratory and short-distance migratory species. The results suggest that, for some bird species in the study area, climate warming can increase population sizes. However, long-term effects of climate change may be different than the interannual fluctuations of temperature considered in this study, especially when interacting effects of habitat losses are taken into account.

The biological diversity of reef-fish in the Florida Keys National Marine Sanctuary (FKNMS) from 1999 – 2016 was evaluated in terms of abundance, biomass, species richness, evenness, Shannon diversity, Simpson diversity, and functional diversity, using observations collected by multiple agencies and institutions under the Reef Visual Census (RVC) program. To compare the different diversity indices species richness, Shannon diversity, Simpson diversity, and functional diversity were converted into effective number of species. I examined the seven indices by no-take marine zones, in seven benthic habitat strata, and across the three-distinct geographic subregions in the Florida Keys domain (Upper, Middle, and Lower Keys). The objective was to describe changes in reef fish community responses through time and space in the Florida Keys, and to determine whether patterns in reef fish diversity indices were attributable to levels of protection, benthic habitat strata, or geographic subregion. The goal was to develop a framework for reef fish biodiversity assessments that can inform management and policy in the FKNMS, and support updates to the periodic Condition Reports generated by the Sanctuary. Diversity indices (with the exception of evenness) were significantly higher in no-take marine zones compared to areas open to fishing. All indices were significantly different by strata type. High Relief Reef habitats had the highest abundance, biomass, richness, Simpson diversity, Shannon diversity, and functional diversity, but had moderate evenness values. The biodiversity metrics for the Upper Keys and Lower Keys were not significantly different, but both of these areas were significantly different from the Middle Keys for all indices except species richness, which did not vary by subregion. Generalized additive models revealed that the principal driver across indices was habitat structure (strata and depth). Time (year), space (latitude, longitude), and no-take marine zones (0, unprotected and 1, protected) explained roughly similar proportions of deviance across all indices. Simpson diversity, Shannon diversity, and functional diversity showed similar trends in no-take marine zones, strata, and subregion through time. The Florida Keys is characterized as having relatively low functional diversity due to a few common traits shared by many individuals and many rare traits shared by a few individuals. This suggests that the Florida Keys reef fish are less vulnerable to functional loss due to high functional redundancy among species. However, functionally rare traits, those possessed by few individuals, are vulnerable to functional loss and will have a larger impact on ecosystem functioning than species that share similar traits. Low functional diversity also suggests lower adaptability to environmental perturbations. Given the minimal robustness of traits, the ecosystem is less likely to possess functions that can withstand disturbances. The impacts of two types of perturbations were examined in a qualitative manner: hurricanes and cold-temperature events. Disturbance by hurricanes in 2004 and 2005 and the extreme cold event of January 2010 had a high impact on reef fish community composition. Between 2004 and 2006, following two consecutive years of hurricanes, abundance of reef fish declined 31%, biomass declined 53%, species richness declined 18%, Simpson diversity declined 12%, Shannon diversity declined 14%, and functional diversity declined 8%. Following a year without hurricanes in 2007 abundance of reef fish increased 11%, biomass increased 13%, richness increased 14%, Simpson and Shannon diversity increased 10%, and functional diversity increased 6%. After the January 2010 extreme cold event, reef fish abundance and biomass also declined 17%, richness declined 10%, Simpson diversity and Shannon diversity declined 5% and 6%, and functional diversity declined 2%. All matrices increased the following year, where abundance increased 13%, biomass increased 31%, richness increased 13%, Simpson diversity increased 7%, Shannon diversity increased 10%, and functional diversity increased 8%. Based on my findings and literature review, to better preserve biodiversity and enhance ecosystem functioning, I recommend prioritizing conservation efforts in source habitats (e.g., High Relief Reefs) and habitats with varying complexity by implementing corridor reserves that facilitate the natural migration of organisms between different habitat types. I also recommend prioritizing preservation of species that possess functionally rare traits with few individuals (e.g., cleaner species) by preserving areas with greater functional diversity (e.g., Higher Relief Reefs and Forereef Deep Linear Reefs).

Thesis (M.S.)--Miami University, Dept. of Botany, 2005. / Title from first page of PDF document. Document formatted into pages; contains [1], v, 38 p. : ill. Includes bibliographical references (p. 35-38).

Natural dispersal mechanisms and biogeographical barriers have shaped species' native distributional ranges over millions of years. However, over the last few centuries, humans have dispersed species beyond their natural ranges. Those species that undergo explosive population growth and rapid expansion in the introduced region are considered as invasive because they have the potential to cause negative effects on desirable species and/or ecosystem services. In chapter II, I identified what ecosystem characteristics are more closely associated with successful establishment of exotic and native species, to have a better idea of where to concentrate our efforts and resources to prevent invasion events while preserving native species. I found that native and exotic species were differently affected by ecosystem properties. Exotic species were favored by human activities and low native species abundance and diversity. However, in Chapter III, I found that species functional traits, such as growth form and phenology, are more important to explain their response to ecosystem characteristics than native status under certain circumstances. The abundance and reproductive capacity of the evaluated plants were reduced when disturbances occurred during their respective active growing periods. This finding suggests that we need to have into account species-specific responses to ecosystem characteristics when managing biological invasions. Chapter IV examined phenotypic differentiation of native, expansive, and introduced populations of Baccharis halimifolia L. occurring in different regions of the world. The results suggest that there are significant phenotypic differences in germination and early growth among native, expansive, and introduced populations, which could have contributed to the success of B. halimifolia in the introduced and expansive ranges. Finally, in Chapter V, I used the information that I learned in the past projects to predict the spread of 45 exotic plants across southeastern United States and evaluated what landscape factors make an area more susceptible to be invaded. I found that the influence of landscape composition and configuration on invasion risk is species-specific. This result suggests that not only we have to consider species functional traits when managing biological invasions, as we saw earlier in the experiment with disturbance timing, but also species habitat preferences.

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Conserving rare species and protecting biodiversity depends on sound information on the nature of rarity. Rarity is multidimensional, presenting the need for a quantitative classification scheme by which to label species as rare or common. I defined rarity for freshwater fishes based on the range extents, habitat breadths, and site abundance and examined the relationship between these dimensions of rarity and imperilment. Imperiled fishes were most often rare by all three dimensions, whereas undesignated species were most often common by all three dimensions. Next, I examined the effect of sampling intensity on observed rarity of stream fish using different numerical and proportional rarity criteria and found that increasing sampling intensity increased the number of species labelled as rare with proportional criteria but did not affect the number of species labelled as rare with numerical criteria. Additional electrofishing passes within a fixed reach increases the likelihood of detecting rare and endemic species. A tradeoff between information collected and sampling resources should be carefully considered in the context of objectives when sampling for rare species. Finally, I examined the effect of regional and watershed habitat variables, biotic interaction variables, and instream habitat variables, on the rare or common status on 23 North American freshwater fishes. I also compared biological and reproductive traits among species classified into the rarity framework. Rarity was successfully explained in 19 of the 23 species and I found that regional and watershed habitat variables were the most important predictors of rarity. I also found that species large body size, high fecundity, and long age at maturity were generally more common by range extent and site abundance while those species that did not guard nests were more frequently rare by site abundance. These results indicate that large-scale variables can be used to successfully predict species rarity and rare fishes differ in their biology and reproduction from common fishes. / Master of Science

Semi-natural grasslands are among the most threatened habitats in Europe, endangered mainly by cessation of former management practices and conversion into other types of land use. Extensive research has been carried out in European grasslands in last decades, to explain origins of diversity and to provide guidelines for its conservation. However, the very slow response of perennial plants to landscape changes often impedes to accurately evaluate why species occur just where they occur and not elsewhere. Abandoned fields are perceived as potential habitats for species from declining grasslands. Indeed, many species are able to spontaneously colonise abandoned fields, but many other species are absent from communities that develop there. An important question remains what limits their successful establishment. By answering this question, we can gain also important insights into factors determining species distribution in grasslands because colonization of recently abandoned fields by grassland species is the ongoing process which is not obscured by historical changes in landscape structure. The very basic aim of this thesis was to evaluate the status quo of dry grassland plants in fields abandoned in last two decades. And in the second step, to identify what are the main constrains of successful...

Aim: The abundances and distributions of some species are more closely matched to variations in climate than others. Species traits that might influence how well the distribution and abundance of a species are matched to climatic variation include life history (e.g., body size and dispersal ability), ecology (e.g., habitat specialization and territoriality) and demography (e.g., population size). Here, we used a survey of bird abundances across the USA to assess the extent to which species abundances and distributions are predicted by climate (i.e., climate matching) and how species traits relate to interspecific variation in climate matching. Location: USA. Time period: 1983–2018. Major taxa studied: Birds. Methods: Species abundances were obtained from the North American Breeding Bird Survey. Climate matching was estimated as the predictive performance of species–climate models fitted using boosted regression trees and generalized additive models and modelled as a function of species traits. Results: Species traits explained 56% of the variation in climate matching among species. Intermediate-sized species were more well matched to climate than smaller or larger species, as were species that lived primarily in forested compared with open habitats, species that were locally more abundant and species that were more territorial. Alternatively, species that were more specialized or had high variability in abundance among sites were less well matched to climate. We also found that species classified as “near threatened” were more well matched to climate, suggesting that these species might be more vulnerable to climate change. However, species classified as “vulnerable” were more decoupled from climate than those of “least concern”, possibly owing to ecological drift associated with progressive population declines. Main conclusions: Our findings provide an ecological basis for understanding the extent to which species abundances and distributions match broad climatic gradients, which can provide the groundwork to improve our ability to predict distributions under global change.

Species diversity may simultaneously be a cause and a consequence of variability in population, community and ecosystem properties. Ecology has traditionally focused on elucidating the causes of biodiversity. However, in the last decade and a half ecologists have asked the opposite question: What are the consequences of species diversity? The majority of these studies elucidated the effects of species diversity within single trophic levels. Incorporating trophic complexity is the next step in this research program. In this dissertation I investigated the causes of resource species diversity, as well as the impacts that resource diversity has on rates of consumption and the stability of population, community and ecosystem properties over time in planktonic food webs. The high diversity of phytoplankton found in nature appears to defy the competitive exclusion principle, and elucidating the mechanisms which maintain this diversity continues to be a challenge. In general, variability in limiting factors is required to maintain non-neutral species diversity, but this variability can be generated by forces outside of the competitive community (i.e. exogenous), or may be the outcome of competitive interactions themselves (i.e. endogenous). Using microcosm experiments, I showed that endogenously generated variability in limiting factors was more effective at maintaining phytoplankton species diversity over the long-term, although the strength of this effect depended on the composition of the phytoplankton community. Existing resource diversity has been proposed to generally weaken consumer-resource interaction strengths and limit consumer control of resource biomass. This is because more diverse resource communities are more likely to contain inedible, unpalatable, toxic or non-nutritious species. However, when resource communities contain multiple palatable species, diversity may also accelerate consumption. Using grazing experiments with multiple zooplankton consumer species, I found that the mechanism, direction and magnitude of modulation of consumption depended on the feeding selectivity of the consumer and the composition of the resource community. By altering consumer-resource interaction strengths in the short-term, resource species diversity may impact the stability of consumer-resource dynamics in the long-term. In separate microcosm experiments, I investigated the influence of resource species diversity, community composition and consumer feeding selectivity on population, community, and ecosystem properties over time. Diversity had positive effects on phytoplankton population biomass, resource community biomass, the rate of photosynthesis, the standing stock of particulate nutrients, and the generalist consumer’s population density. It also stabilized resource community biomass and the stocks of particulate nutrients over time. Unexpectedly, diversity did not stabilize either of the consumer populations, regardless of feeding selectivity. This suggests that effects of diversity on resource community properties do not impact consumer dynamics linearly. Resource community composition was generally more important than resource species diversity in determining food web properties. The importance of community composition in determining both the causes and consequences of resource diversity in these experiments points to the importance of species’ traits and the outcomes of their interactions. I suggest that the use of complex adaptive systems theory and trait-based approaches in the future will allow a consideration of the feedbacks between the causes and consequences of species diversity in food webs. / Graduate

L’urbanisation aboutit à une grande diversité environnementale, paysagère, historique des espaces verts en ville, avec également des pratiques de gestion très variées, qui, peuvent affecter la biodiversité qu’ils abritent. Or, la composante du sol reste très peu étudiée et les communautés de Collemboles présentes dans les parcs urbains constitue une thématique de recherche jusqu’à présent relativement ignorée. Si ces Arthropodes sont de petite taille (de l’ordre du millimètre), ils sont en effet très nombreux dans les sols et aujourd’hui reconnus comme de bons indicateurs pour le monitoring des sols.Les effets de différents filtres abiotiques ont été testés en appliquant à la fois une approche taxonomique et fonctionnelle des communautés de Collemboles dans les parcs urbains de Naples et de Montpellier. La thèse se développe alors en trois axes correspondant à l’étude des effets:- de la composition et fragmentation de la mosaïque urbaine proche- des dynamiques temporelles propres aux parcs- des pratiques de gestion courantesL’analyse conduite à Montpellier a permis de mettre en évidence l’existence de plusieurs groupes homogènes de paysages auxquels étaient associées des structures de communautés différentes. En effet, les paysages urbains les plus hétérogènes favorisent le développement et le maintien de communautés mieux structurées et plus riches en espèces.Par ailleurs, l’étude menée à Naples a montré que le maintien d’un couvert végétal spécifique et principalement boisé, conjointement à la présence de litière au sol, apparaissent comme les facteurs les plus importants pour permettre l’établissement de communautés mieux structurées et plus riches en espèces. Dans une moindre mesure, l’âge des parcs et le précédant usage du sol étaient également déterminants.Enfin, une analyse fonctionnelle (étude de traits morphologiques et préférences de microhabitats) a été envisagée pour évaluer l’intensification de la gestion du sous-bois au sein des habitats boisés des parcs des deux villes. Un gradient abiotique clair a été observé. En revanche, contrairement aux hypothèses énoncées et à la littérature récente sur le sujet, les communautés de Collemboles étaient mieux discriminées du point de vue taxonomique que du point de vue fonctionnel. Il semblerait donc que l’intensification de la gestion du sous-bois ne soit pas un filtre environnemental imposant des changements dans les patterns de traits des espèces présentes.Si d’un côté les études développées dans cette thèse apportent des connaissances fondamentales sur l’écologie des Collemboles présents dans les parcs urbains, de l’autre elle vise à intégrer ces résultats pour un développement plus durable en termes d’aménagement et de gestion des espaces verts urbains. / Urbanization causes a huge diversity in landscapes, environmental conditions and green spaces history. This phenomena also induces different vegetation management practices, which may affect urban fauna. However, scarce attention has been paid to belowground communities in cities and Collembola hosted by soils of urban parks represent a neglected research topic. These taxa are very common in most soils and have been recognized as proper indicators for soil monitoring programs.The effects of diverse abiotic filters on Collembola in Naples and Montpellier public parks has been studied from both taxonomic and functional points of view. In particular, the PhD work was developed based on three principal axes, aiming to test the effects of:- the neighboring landscape context,- the park historical dynamics,- the current park management.The analyses carried out in Montpellier showed different neighboring landscape patterns to which belonged diverse species communities. Indeed, more heterogeneous landscape patterns guarantee the richest and most structured species communities.The study conducted in Naples highlighted that maintaining a specific land cover, especially a canopy cover, jointly to a litter layer on soils are the main factors assuring more structured species communities. To a less extent, park age and the previous land use of the area were also important drivers in modelling species assemblages.Finally, a functional analysis (i.e. morphological traits and microhabitat preferences) was applied to evaluate the brushwood management intensification in woody areas of both cities parks. A clear abiotic gradient was observed. By contrast, functional responses of Collembola communities to brushwood management intensification contradicted our research hypothesis based on the recent literature. Thus, it seems that brushwood removal does not cause shifts in species trait patterns in urban parks.This PhD work increased fundamental knowledge on urban park Collembola ecology, and it strives to integrate these findings in a more suitable landscaping and management of urban green spaces.