Being in the midst of a pandemic with patients having minor symptoms that quickly become fatal to patients with situations like a stemi heart attack, a fatal accident injury, and so on, the importance of medical research to improve speed and efficiency in patient care, has increased. As researchers in the computer domain work hard to use automation in technology in assisting the first responders in the work they do, decreasing the cognitive load on the field crew, time taken for documentation of each patient case and improving accuracy in details of a report has been a priority. <br>This paper presents an information extraction algorithm that custom engineers certain existing extraction techniques that work on the principles of natural language processing like metamap along with syntactic dependency parser like spacy for analyzing the sentence structure and regular expressions to recurring patterns, to retrieve patient-specific information from medical narratives. These concept value pairs automatically populates the fields of an EMR form which could be reviewed and modified manually if needed. This report can then be reused for various medical and billing purposes related to the patient.

La parution d’un certain nombre de travaux menés sur les « conjonctions de subordination », Deulofeu (1999a) sur que, Benzitoun (2006a) à propos de quand, Corminboeuf (2009) pour si, Debaisieux (2006) concernant parce que, quoique, puisque et bien que, etc., a permis de rendre justice à la pluralité des fonctionnements syntaxiques des structures ainsi introduites en faisant valoir le fait qu’elles ne peuvent être constamment ramenées à une relation de dépendance grammaticale. C’est dans cette même lignée que s’inscrit ce travail qui a pour objectif de recenser, sur la base de corpus de français parlé et écrit, les différents fonctionnements syntaxiques de la conjonction alors que en français contemporain. Il apparait que les séquences ainsi introduites relèvent de cinq principaux emplois, dont un seul est à considérer comme véritablement « subordonné ». Nous associerons par ailleurs un ou plusieurs effets de sens à chacun de ces emplois. / A number of recent studies dealing about the syntactic properties of French subordinating conjunctions such as que (which, who, that) (Deulofeu, 1999a), quand (when) (Benzitoun, 2006a), si (if) (Corminboeuf, 2009) or parce que, quoique, puisque and bien que (because, since, although) (Debaisieux, 2006) have brought an increased awareness of the various grammatical behaviors of such forms, which definitely cannot be reduced to a simple relation of syntactic dependency. Using this approach, the present dissertation will attempt to offer a precise account of the conjunction alors que (whereas) as it is used in spoken and written contemporary French. It will be demonstrated that the constructions introduced by alors que can be classified into five main syntactic types, only one of them presenting a truly “subordinating” effect. In addition to analyzing their specific syntactic structure, our different types will be described according to their particular semantic value.

Many approaches to solving tasks in the field of Natural Language Processing (NLP) use syntactic dependency trees (SDTs) as a feature to represent the latent nonlinear structure within sentences. Recently, work in parsing sentences to graph-based structures which encode semantic relationships between words—called semantic dependency graphs (SDGs)—has gained interest. This thesis seeks to explore the use of SDGs in place of and alongside SDTs within a relation classification system based on long short-term memory (LSTM) neural networks. Two methods for handling the information in these graphs are presented and compared between two SDG formalisms. Three new relation extraction system architectures have been created based on these methods and are compared to a recent state-of-the-art LSTM-based system, showing comparable results when semantic dependencies are used to enhance syntactic dependencies, but with significantly fewer training parameters.

<p dir="ltr">Semantic pairs, which consist of related entities or concepts, serve as the foundation for comprehending the meaning of language in both written and spoken forms. These pairs enable to grasp the nuances of relationships between words, phrases, or ideas, forming the basis for more advanced language tasks like entity recognition, sentiment analysis, machine translation, and question answering. They allow to infer causality, identify hierarchies, and connect ideas within a text, ultimately enhancing the depth and accuracy of automated language processing.</p><p dir="ltr">Nevertheless, the task of extracting semantic pairs from sentences poses a significant challenge, necessitating the relevance of syntactic dependency patterns (SDPs). Thankfully, semantic relationships exhibit adherence to distinct SDPs when connecting pairs of entities. Recognizing this fact underscores the critical importance of extracting these SDPs, particularly for specific semantic relationships like hyponym-hypernym, meronym-holonym, and cause-effect associations. The automated extraction of such SDPs carries substantial advantages for various downstream applications, including entity extraction, ontology development, and question answering. Unfortunately, this pivotal facet of pattern extraction has remained relatively overlooked by researchers in the domains of natural language processing (NLP) and information retrieval.</p><p dir="ltr">To address this gap, I introduce an attention-based supervised deep learning model, ASPER. ASPER is designed to extract SDPs that denote semantic relationships between entities within a given sentential context. I rigorously evaluate the performance of ASPER across three distinct semantic relations: hyponym-hypernym, cause-effect, and meronym-holonym, utilizing six datasets. My experimental findings demonstrate ASPER's ability to automatically identify an array of SDPs that mirror the presence of these semantic relationships within sentences, outperforming existing pattern extraction methods by a substantial margin.</p><p dir="ltr">Second, I want to use the SDPs to extract semantic pairs from sentences. I choose to extract cause-effect entities from medical literature. This task is instrumental in compiling various causality relationships, such as those between diseases and symptoms, medications and side effects, and genes and diseases. Existing solutions excel in sentences where cause and effect phrases are straightforward, such as named entities, single-word nouns, or short noun phrases. However, in the complex landscape of medical literature, cause and effect expressions often extend over several words, stumping existing methods, resulting in incomplete extractions that provide low-quality, non-informative, and at times, conflicting information. To overcome this challenge, I introduce an innovative unsupervised method for extracting cause and effect phrases, PatternCausality tailored explicitly for medical literature. PatternCausality employs a set of cause-effect dependency patterns as templates to identify the key terms within cause and effect phrases. It then utilizes a novel phrase extraction technique to produce comprehensive and meaningful cause and effect expressions from sentences. Experiments conducted on a dataset constructed from PubMed articles reveal that PatternCausality significantly outperforms existing methods, achieving a remarkable order of magnitude improvement in the F-score metric over the best-performing alternatives. I also develop various PatternCausality variants that utilize diverse phrase extraction methods, all of which surpass existing approaches. PatternCausality and its variants exhibit notable performance improvements in extracting cause and effect entities in a domain-neutral benchmark dataset, wherein cause and effect entities are confined to single-word nouns or noun phrases of one to two words.</p><p dir="ltr">Nevertheless, PatternCausality operates within an unsupervised framework and relies heavily on SDPs, motivating me to explore the development of a supervised approach. Although SDPs play a pivotal role in semantic relation extraction, pattern-based methodologies remain unsupervised, and the multitude of potential patterns within a language can be overwhelming. Furthermore, patterns do not consistently capture the broader context of a sentence, leading to the extraction of false-positive semantic pairs. As an illustration, consider the hyponym-hypernym pattern <i>the w of u</i> which can correctly extract semantic pairs for a sentence like <i>the village of Aasu</i> but fails to do so for the phrase <i>the moment of impact</i>. The root cause of this limitation lies in the pattern's inability to capture the nuanced meaning of words and phrases in a sentence and their contextual significance. These observations have spurred my exploration of a third model, DepBERT which constitutes a dependency-aware supervised transformer model. DepBERT's primary contribution lies in introducing the underlying dependency structure of sentences to a language model with the aim of enhancing token classification performance. To achieve this, I must first reframe the task of semantic pair extraction as a token classification problem. The DepBERT model can harness both the tree-like structure of dependency patterns and the masked language architecture of transformers, marking a significant milestone, as most large language models (LLMs) predominantly focus on semantics and word co-occurrence while neglecting the crucial role of dependency architecture.</p><p dir="ltr">In summary, my overarching contributions in this thesis are threefold. First, I validate the significance of the dependency architecture within various components of sentences and publish SDPs that incorporate these dependency relationships. Subsequently, I employ these SDPs in a practical medical domain to extract vital cause-effect pairs from sentences. Finally, my third contribution distinguishes this thesis by integrating dependency relations into a deep learning model, enhancing the understanding of language and the extraction of valuable semantic associations.</p>