The Singular Value Decomposition (SVD) has many applications in image processing. The SVD can be used to restore a corrupted image by separating significant information from the noise in the image data set. This thesis outlines broad applications that address current problems in digital image processing. In conjunction with SVD filtering, image compression using the SVD is discussed, including the process of reconstructing or estimating a rank reduced matrix representing the compressed image. Numerical plots and error measurement calculations are used to compare results of the two SVD image restoration techniques, as well as SVD image compression. The filtering methods assume that the images have been degraded by the application of a blurring function and the addition of noise. Finally, we present numerical experiments for the SVD restoration and compression to evaluate our computation.

This paper presents the theory of Noetherian filtrations, an important concept in commutative algebra. The paper describes many aspects of the theory of these objects, presenting basic results, examples and applications. In the study of Noetherian filtrations, a few other important concepts are introduced such as Rees algebras, essential powers filtrations, and filtrations on modules. Basic results on these are presented as well. This thesis discusses at length how Noetherian filtrations relate to important constructions in commutative algebra, such as graded rings and modules, dimension theory and associated primes. In addition, the paper presents an original proof of the finiteness of the intersection algebra of principal ideals in a UFD. It concludes by discussing possible applications of this result to other areas of commutative algebra.

In biomedical research and lifetime data analysis, the comparison of two hazard functions usually plays an important role in practice. In this thesis, we consider the standard independent two-sample framework under right censoring. We construct efficient and useful confidence intervals for the ratio and difference of two hazard functions using smoothed empirical likelihood methods. The empirical log-likelihood ratio is derived and its asymptotic distribution is a chi-squared distribution. Furthermore, the proposed method can be applied to medical diagnosis research. Simulation studies show that the proposed EL confidence intervals have better performance in terms of coverage accuracy and average length than the traditional normal approximation method. Finally, our methods are illustrated with real clinical trial data. It is concluded that the empirical likelihood methods provide better inferential outcomes.

To significantly improve the early detection of cervical precancers and cancers, LightTouch™ is under development by SpectRx Inc.. LightTouch™ identifies cancers and precancers quickly by using a spectrometer to analyze light reflected from the cervix. Data from the spectrometer is then used to create an image of the cervix that highlights the location and severity of disease. Our research is conducted to find the appropriate models that can be used to generate map-like image showing disease tissue from normal and further diagnose the cervical cancerous conditions. Through large work of explanatory variable search and reduction, logistic regression and Partial Least Square Regression successfully applied to our modeling process. These models were validated by 60/40 cross validation and 10 folder cross validation. Further examination of model performance, such as AUC, sensitivity and specificity, threshold had been conducted.

Fourier Transform Infrared (FTIR) microscopy is a sensitive method for detecting difference in the morphology of biological cells. In this study FTIR spectra were obtained for uninfected cells, and cells infected with two different viruses. The spectra obtained are difficult to discriminate visually. Here we apply advanced statistical methods to the analysis of the spectra, to test if such spectra are useful for diagnosing viral infections in cells. Logistic Regression (LR) and Partial Least Squares Regression (PLSR) were used to build models which allow us to diagnose if spectral differences are related to infection state of the cells. A three-fold, balanced cross-validation method was applied to estimate the shrinkages of the area under the receiving operator characteristic curve (AUC), and specificities at sensitivities of 95%, 90% and 80%. AUC, sensitivity and specificity were used to gauge the goodness of the discrimination methods. Our statistical results shows that the spectra associated with different cellular states are very effectively discriminated. We also find that the overall performance of PLSR is better than that of LR, especially for new data validation. Our analysis supports the idea that FTIR microscopy is a useful tool for detection of viral infections in biological cells.

This thesis presents a comparison for modeling and forecasting Chinese futures market of copper and aluminum with single time series and multivariate time series under linear restrictions. For single time series, data transformation for stationary purpose has been tested and performed before ARIMA model was built. For multivariate time series, co-integration rank test has been performed and included before VECM model was built. Based on selected models, the forecasting shows multivariate time series analysis has a better result than single time series, which indicates utilizing the relationships among the series can improve the accuracy of time series forecasting.

Diagnostic tests are central in the field of modern medicine. One of the main factors for interpreting a diagnostic test is the discriminatory accuracy. For a continuous-scale diagnostic test, the area under the receiver operating characteristic (ROC) curve, AUC, is a useful one-number summary index for the diagnostic accuracy of the test. When only a particular region of the ROC curve would be of interest, the partial AUC (pAUC) is a more appropriate index for the diagnostic accuracy. In this thesis, we develop seven confidence intervals for the pAUC under the semi-parametric models for the diseased and non-diseased populations by using the normal approximation, bootstrap and empirical likelihood methods. In addition, we conduct simulation studies to compare the finite sample performance of the proposed confidence intervals for the pAUC. A real example is also used to illustrate the application of the recommended intervals.

The purpose of this analysis is to evaluate the usefulness of Fourier Transform Infrared (FTIR) spectroscopy in the detection of Herpes Simplex Virus 1 (hsv1) infection at an early stage. The raw absorption values were standardized to eliminate inter-sampling error. Wilcoxon-Mann-Whitney (WMW) statistic's Z score was calculated to select significant spectral regions. Partial least squares modeling was performed because of multicollinearity. Kolmogorov-Smirnov statistic showed models for healthy tissues from different time groups were not from same distribution. The additional 24 hour dataset was evaluated using the following methods. Variables were selected by WMW Z score. Difference of Composites statistic, DC, was created as a disease indicator and evaluated using area under the ROC curve, specificities, and confidence intervals using bootstrap algorithm. The specificity of DC was high, however the confidence intervals were large. Future studies are required with larger sample sizes to test this statistic's usefulness.

While much research has been done regarding different Nonnegative Matrix Factorization (NMF) algorithms, less time has been spent looking at initialization techniques. In this thesis, four different initializations are considered. After a brief discussion of NMF, the four initializations are described and each one is independently examined, followed by a comparison of the techniques. Next, each initialization's performance is investigated with respect to the changes in the size of the data set. Finally, a method by which smaller data sets may be used to determine how to treat larger data sets is examined.

In this thesis, we study two independent samples under right censoring. Using a smoothed empirical likelihood method, we investigate the difference of quantiles in the two samples and construct the pointwise confidence intervals from it as well. The empirical log-likelihood ratio is proposed and its asymptotic limit is shown as a chi-squared distribution. In the simulation studies, in terms of coverage accuracy and average length of confidence intervals, we compare the empirical likelihood and the normal approximation method. It is concluded that the empirical likelihood method has a better performance. At last, a real clinical trial data is used for the purpose of illustration. Numerical examples to illustrate the efficacy of the method are presented.