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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
661

Sulphur Amino Acid Requirement and Metabolism in the Total Parenteral Nutrition (TPN) Fed Human Neonate

Courtney-Martin, Glenda 23 September 2009 (has links)
Except for tyrosine, the amino acid requirement of parenterally fed (PN) human neonates has not been derived. Methionine and cysteine are indispensable and dispensable sulphur amino acids respectively. Cysteine is synthesized from methionine. Cysteine is unstable in solution, and is left out or added in very small amounts to amino acid solutions. Methionine is added to compensate for the lack of cysteine, assuming that the neonate will convert methionine to cysteine to meet the body’s metabolic demand. Methionine is hepatotoxic and there is evidence that the neonate has limited ability for its conversion to cysteine. To determine the requirement of the neonate for methionine, PN-fed, stable, post-surgical neonates received graded intakes of methionine. The mean methionine requirement was estimated to be 49 mg.kg-1.day-1, which is 48 to 90% of the methionine content of current commercial amino acid solutions. Because cysteine is the rate limiting substrate for glutathione (GSH) synthesis and current methods of determining amino acid requirement measure requirement for protein synthesis, SAA requirements for maintenance of GSH status was deleniated in healthy adult males and in PN-fed human neonates. GSH kinetics was measured in healthy men receiving the mean methionine requirement and graded intakes of cysteine. GSH synthesis did not change with the addition of cysteine. Additionally, PN-fed post-surgical neonates recieved a methionine-adequate cysteine-free PN followed by cysteine supplemented PN for two 3-day periods and GSH kinetics measured on days 3 and 6. There was no change in GSH synthesis in response to cysteine supplementation. It is concluded that the PN-fed human neonate is capable of synthesizing enough cysteine from methionine not only for protein synthesis but for GSH synthesis. For both healthy men and stable post-surgical neonates, the requirement for GSH synthesis is met at the sulphur amino acid requirement derived using the indicator amino acid technique
662

Sulphur Amino Acid Requirement and Metabolism in the Total Parenteral Nutrition (TPN) Fed Human Neonate

Courtney-Martin, Glenda 23 September 2009 (has links)
Except for tyrosine, the amino acid requirement of parenterally fed (PN) human neonates has not been derived. Methionine and cysteine are indispensable and dispensable sulphur amino acids respectively. Cysteine is synthesized from methionine. Cysteine is unstable in solution, and is left out or added in very small amounts to amino acid solutions. Methionine is added to compensate for the lack of cysteine, assuming that the neonate will convert methionine to cysteine to meet the body’s metabolic demand. Methionine is hepatotoxic and there is evidence that the neonate has limited ability for its conversion to cysteine. To determine the requirement of the neonate for methionine, PN-fed, stable, post-surgical neonates received graded intakes of methionine. The mean methionine requirement was estimated to be 49 mg.kg-1.day-1, which is 48 to 90% of the methionine content of current commercial amino acid solutions. Because cysteine is the rate limiting substrate for glutathione (GSH) synthesis and current methods of determining amino acid requirement measure requirement for protein synthesis, SAA requirements for maintenance of GSH status was deleniated in healthy adult males and in PN-fed human neonates. GSH kinetics was measured in healthy men receiving the mean methionine requirement and graded intakes of cysteine. GSH synthesis did not change with the addition of cysteine. Additionally, PN-fed post-surgical neonates recieved a methionine-adequate cysteine-free PN followed by cysteine supplemented PN for two 3-day periods and GSH kinetics measured on days 3 and 6. There was no change in GSH synthesis in response to cysteine supplementation. It is concluded that the PN-fed human neonate is capable of synthesizing enough cysteine from methionine not only for protein synthesis but for GSH synthesis. For both healthy men and stable post-surgical neonates, the requirement for GSH synthesis is met at the sulphur amino acid requirement derived using the indicator amino acid technique
663

Advances in Ligand Binding Predictions using Molecular Dynamics Simulations

Keränen, Henrik January 2014 (has links)
Biochemical processes all involve associations and dissociations of chemical entities. Understanding these is of substantial importance for many modern pharmaceutical applications. In this thesis, longstanding problems with regard to ligand binding are treated with computational methods, applied to proteins of key pharmaceutical importance. Homology modeling, docking, molecular dynamics simulations and free-energy calculations are used here for quantitative characterization of ligand binding to proteins. By combining computational tools, valuable contributions have been made for pharmaceutically relevant areas: a neglected tropical disease, an ion channel anti-drug-target, and GPCR drug-targets. We report three compounds inhibiting cruzain, the main cysteine protease of the protozoa causing Chagas’ disease. The compounds were found through an extensive virtual screening study and validated with experimental enzymatic assays. The compounds inhibit the enzyme in the μM-range and are therefore valuable in further lead optimization studies. A high-resolution crystal structure of the BRICHOS domain is reported, together with molecular dynamics simulations and hydrogen-deuterium exchange mass spectrometry studies. This work revealed a plausible mechanism for how the chaperone activity of the domain may operate. Rationalization of structure-activity relationships for a set of analogous blockers of the hERG potassium channel is given. A homology model of the ion channel was used for docking compounds and molecular dynamics simulations together with the linear interaction energy method employed for calculating the binding free-energies. The three-dimensional coordinates of two GPCRs, 5HT1B and 5HT2B, were derived from homology modeling and evaluated in the GPCR Dock 2013 assessment. Our models were in good correlation with the experimental structures and all of them placed among the top quarter of all models assessed.  Finally, a computational method, based on molecular dynamics free-energy calculations, for performing alanine scanning was validated with the A2A adenosine receptor bound to either agonist or antagonist. The calculated binding free-energies were found to be in good agreement with experimental data and the method was subsequently extended to non-alanine mutations. With extensive experimental mutation data, this scheme is a valuable tool for quantitative understanding of ligand binding and can ultimately be used for structure-based drug design.
664

Carbon metabolism in transgenic roots with altered levels of hexokinase and triosephosphate isomerase and growing under different nitrogen status

Sedaghatkish, Afsaneh 01 1900 (has links)
Ce projet a pour but d’évaluer la capacité de la voie des pentoses phosphates (VPP) dans les racines transgéniques de pomme de terre (Solanum tuberosum) modifiées pour exprimer différents niveaux de l'hexokinase (HK) et de la triosephosphate isomérase cytosolique (cTPI). Dans les racines, la VPP alimente la voie de l’assimilation de l’azote en equivalents réducteurs et permet donc la biosynthèse des acides aminés. Le glucose-6-phosphate produit par l’HK est consommé par la partie oxydative de la VPP catalysée par la glucose-6-phosphate déshydrogénase (G6PDH) et la 6-phosphogluconate déshydrogénase (6PGDH). Les changements dans l'expression de HK et cTPI peuvent affecter le fonctionnement de la VPP et les mécanismes qui sont liés à l’utilisation des équivalents réducteurs produits par la VPP, comme l'assimilation de l’azote et la synthèse des acides aminés. Afin d’évaluer l’effet des manipulations génétiques de l’HK et de la cTPI sur l’assimilation de l’azote, nous avons cultivé les racines transgéniques sur des milieux contenant des concentrations élevées (7 mM) ou basses (0,7 mM) de nitrate d’ammonium comme source d’azote. Les résultats montrent que la culture sur un milieu riche en azote induit les activités G6PDH et 6PGDH. Les données montrent que la capacité de la VPP est plus grande avec des niveaux élevés en HK ou en cTPI. Nous avons aussi pu démontrer une plus grande activité spécifique de l’HK dans les conditions pauvres en azote. Ces données ont été complémentées par des mesures des pools d’acides aminés dans les racines transgéniques cultivées sur différents niveaux d’azote. Aucune tendance notable des pools d’acides aminés n’a été remarquée dans les racines modifiées pour leur contenu en HK suggèrant que la manipulation de HK n’affecte pas l'assimilation de l’azote. Dans les racines transgéniques modifiées pour la cTPI, les ratios Gln/Glu et Asn/Asp sont plus élevés chez les clones antisens, indiquant une assimilation de l’azote plus élevée. Ces résultats ont démontré l'activation de l'assimilation de l’azote chez les clones antisens cTPI dans les conditions élevées et basses d’azote alors que la manipulation de l’HK n’affecte pas l’assimilation de l’azote. / This study investigates the capacity of the oxidative pentose phosphate pathway (oxPPP) and nitrogen metabolism in transgenic potato (Solanum tuberosum) roots modified to express different levels of hexokinase (HK) or cytosolic triosephosphate isomerase (cTPI) growing under different nitrogen regimes. The flux of carbon through the oxPPP in cTPI antisense roots is higher than control roots growing under high supply of N. On the other hand, the conversion of Glucose (Glc) to Glucose-6-phosphate (G6P) is higher in roots overexpressing HK than in antisense HK roots growing at a high level of N. Therefore, overexpression of HK or down regulation of cTPI activities in transgenic roots might be compensated by increased C catabolism through the oxPPP. In order to see the affect of HK and cTPI manipulation on N assimilation, the transgenic roots were grown on media with low or high concentration of ammonium nitrate as the N source. The specific activity of the oxPPP enzymes glucose-6-phosphate dehydrogenase (G6PDH) and 6-phosphogluconate dehydrogenase (6PGDH) were both increased by an increased N supply in HK and cTPI transgenic roots. This is consistent with the provision of reducing equivalents for N assimilation. The data also show that the capacity of the oxPPP is higher in roots with high HK or cTPI activity. We were able to detect higher HK specific activity in N deficient conditions. These data were complemented with measurements of amino acid pools in transgenic roots. No trend in amino acid pools was found in roots modified for HK activity. However, down regulation of cTPI led to higher Gln, Gln/Glu and Asn/Asp ratios, indicating higher assimilation of N. These results demonstrated the activation of N assimilation in cTPI antisense clones while the manipulation of HK is unlikely to affect the N assimilation.
665

Directed Evolution of Glutathione Transferases with Altered Substrate Selectivity Profiles : A Laboratory Evolution Study Shedding Light on the Multidimensional Nature of Epistasis

Zhang, Wei January 2011 (has links)
Directed evolution is generally regarded as a useful approach in protein engineering. By subjecting members of a mutant library to the power of Darwinian evolution, desired protein properties are obtained. Numerous reports have appeared in the literature showing the success of tailoring proteins for various applications by this method. Is it a one-way track that protein practitioners can only learn from nature to enable more efficient protein engineering? A structure-and-mechanism-based approach, supplemented with the use of reduced amino acid alphabets, was proposed as a general means for semi-rational enzyme engineering. Using human GST A2-2*E, the most active human enzyme in the bioactivation of azathioprine, as a parental enzyme to test this approach, a L107G/L108D/F222H triple-point mutant of GST A2-2*E (thereafter designated as GDH) was discovered with 70-fold increased activity, approaching the upper limit of specific activity of the GST scaffold. The approach was further experimentally verified to be more successful than intuitively choosing active-site residues in proximity to the bound substrate for the improvement of enzyme performance. By constructing all intermediates along all putative mutational paths leading from GST A2-2*E to mutant GDH and assaying them with nine alternative substrates, the fitness landscapes were found to be “rugged” in differential fashions in substrate-activity space. The multidimensional fitness landscapes stemming from functional promiscuity can lead to alternative outcomes with enzymes optimized for other features than the selectable markers that were relevant at the origin of the evolutionary process. The results in this thesis suggest that in this manner an evolutionary response to changing environmental conditions can readily be mounted. In summary, the thesis demonstrates the attractive features of the structure-and-mechanism-based semi-rational directed evolution approach for optimizing enzyme performance. Moreover, the results gained from the studies show that laboratory evolution may refine our understanding of evolutionary process in nature.
666

Melanopsin polymorphisms in seasonal affective disorder /

Roecklein, Kathryn Ariel. January 2005 (has links) (PDF)
Thesis (M.S.)--Uniformed Services University of the Health Sciences, 2005. / Running title: Seasonal affective disorder and melanopsin. Typescript (photocopy).
667

Proteogenomics for personalised molecular profiling

Schlaffner, Christoph Norbert January 2018 (has links)
Technological advancements in mass spectrometry allowing quantification of almost complete proteomes make proteomics a key platform for generating unique functional molecular data. Furthermore, the integrative analysis of genomic and proteomic data, termed proteogenomics, has emerged as a new field revealing insights into gene expression regulation, cell signalling, and disease processes. However, the lack of software tools for high-throughput integration and unbiased modification and variant detection hinder efforts for large-scale proteogenomics studies. The main objectives of this work are to address these issues by developing and applying new software tools and data analysis methods. Firstly, I address mapping of peptide sequences to reference genomes. I introduce a novel tool for high-throughput mapping and highlight its unique features facilitating quantitative and post-translational modification mapping alongside accounting for amino acid substitutions. The performance is benchmarked. Furthermore, I offer an additional tool that permits generation of web accessible hubs of genome wide mappings. To enable unbiased identification of post-translational modifications and amino acid substitutions for high resolution mass spectrometry data, I present algorithmic updates the mass tolerant blind spectrum comparison tool ’MS SMiV’. I demonstrate the applicability of the changes by benchmarking against a published mass tolerant database search of a high resolution tandem mass spectrometry dataset. I then present the application of ‘MS SMiV’ on a panel of 50 colorectal cancer cell lines. I show that the adaption of ‘MS SMiV’ outperforms traditional sequence database based identification of single amino acid variants. Furthermore, I highlight the utility of mass tolerant spectrum matching in combination with isobaric labelled quantitative proteomics in distinguishing between post-translational modifications and amino acid variants of similar mass. In the last part of this work I integrate both tools with a high-throughput proteogenomic identification pipeline and apply it to a pilot study of chondrocytes derived from 12 osteoarthritic individuals. I show the value of this approach in identifying variation between individuals and molecular levels and highlight them with individual examples. I show that multi-plexed proteogenomics can be used to infer genotypes of individuals.
668

Estudo de transições de fase em cristais de l-alanina + ácido oxálico

Vilela, Rivelino Cunha January 2013 (has links)
VILELA, Rivelino Cunha. Estudo de transições de fase em cristais de l-alanina + ácido oxálico. 2013. 113 f. Tese (Doutorado em Física) - Programa de Pós-Graduação em Física, Departamento de Física, Centro de Ciências, Universidade Federal do Ceará, Fortaleza, 2013. / Submitted by Edvander Pires (edvanderpires@gmail.com) on 2015-10-29T21:51:24Z No. of bitstreams: 1 2013_tese_rcvilela.pdf: 12577577 bytes, checksum: 4dc32419c1bbdde79375612c04227181 (MD5) / Approved for entry into archive by Edvander Pires(edvanderpires@gmail.com) on 2015-11-03T19:48:22Z (GMT) No. of bitstreams: 1 2013_tese_rcvilela.pdf: 12577577 bytes, checksum: 4dc32419c1bbdde79375612c04227181 (MD5) / Made available in DSpace on 2015-11-03T19:48:22Z (GMT). No. of bitstreams: 1 2013_tese_rcvilela.pdf: 12577577 bytes, checksum: 4dc32419c1bbdde79375612c04227181 (MD5) Previous issue date: 2013 / In the present word we have studied the effect of temperature on the Raman spectra of crystals of L-alanine + oxalic acid, C3H8NO2+.C2HO4-. Raman spectroscopy measurements were performed on polycrystalline samples at different temperatures varying in the range from room temperature to T = 20 K; a tentative assignment of all normal modes was furnished. In order to help the understanding of the crystal behavior we have also obtained X-ray diffractograms and studied the dependence of lattice parameters through dilatometry as a function of temperature in the 290 K – 93 K range. The three different techniques allowed us to construct a picture of the material under low temperature conditions. As a consequence we have realized that L-alanine + oxalic acid crystal undergoes three phase transitions at low temperatures. The splitting of a band at 90 cm-1 and an anomaly in one of the lattice parameters are the signature for the first phase transition that is observed at 250 K. At 150 K it was observed the appearance of two new bands in the Raman spectrum and, simultaneously, it was observed change in the curves of a and c lattice parameters. Additionally, it was verified the appearance of new peaks in the X-ray diffractogram at the same temperature, characterizing the second phase transition. At a temperature even lower, at about 43 K, it was verified the occurrence of the third phase transition that has as main characteristic the splitting of two bands that are associated to the lattice modes. Changes in the modes associated with CH3 and NH3+ during the cooling is discussed. An important behavior of the crystal with the cooling process was the red shift of the band of lower frequency, similar to the soft-mode vibration of ferroelectric materials, although the frequency of the mode in L-alanine + oxalic acid does not goes to zero. Based on the results on Raman spectroscopy, dilatometry and X-ray diffraction, and on the possible symmetry sites occupied by the molecules through the O=CC group in the various phases, it is suggested the following sequence of phase transitions D24  C2h5  Cs3  C23, which should occur at 250 K, 150 K and 43 K. / Neste trabalho, estudou-se o efeito da temperatura nos espectros Raman de cristais de L-alanina + ácido oxálico, C3H8NO2+.C2HO4-. Foram realizadas medidas de espectroscopia Raman em policristais a diferentes temperaturas no intervalo compreendido entre a temperatura ambiente e a temperatura de 20 K, sendo fornecida uma identificação tentativa para todos os modos normais de vibração observados. Para auxiliar o entendimento do comportamento do cristal também foram obtidos os difratogramas de raios-X bem como estudada a dependência dos parâmetros de rede em função da temperatura através de dilatometria no intervalo entre 290 K e 93 K. As três técnicas utilizadas em conjunto permitiram mostrar o comportamento estrutural do material em baixas temperaturas. Deste quadro foi possível inferir que os cristais de L-alanina + ácido oxálico apresentam três diferentes transições de fase durante o resfriamento. Em 250 K o aparecimento de um dubleto em 90 cm-1 e a anomalia num dos parâmetros de rede apontam para a ocorrência da primeira transição de fase. Em 150 K surgem pelo menos duas novas bandas no espectro Raman, ao mesmo tempo em que ocorrem bruscas mudanças de inclinação nas curvas que representam as dimensões dos eixos a e c do cristal. Também se verifica que, de forma semelhante ao que ocorre com os espectros Raman, aparecem novos picos no difratograma de raios-X em torno desta temperatura, caracterizando assim a segunda transição de fase. A uma temperatura ainda mais baixa, em torno de 43 K, foi verificada a ocorrência da terceira transição de fase, que tem como principal característica a separação de dois modos Raman associados a modos da rede. Mudanças nos ambientes dos grupos CH3 e do NH3+ durante o resfriamento são discutidas. Um importante aspecto apresentado pelos espectros Raman com o resfriamento da amostra foi o deslocamento da banda de mais baixa energia para menores valores de frequências, semelhantemente ao que ocorre com vibrações do tipo soft-mode em materiais ferroelétricos, embora a frequência do modo no cristal de L-alanina + ácido oxálico não tenha ido à zero. Baseado nos resultados acima e nos possíveis sítios de simetria ocupados pelas moléculas através do grupo O=CC nas diversas fases, sugere-se a seguinte sequência de transições de fase D24 para C2h5 para Cs3 para C23, que aconteceriam, respectivamente, nas temperaturas de 250 K, 150 K e 43 K.
669

Propriedades Vibracionais do Dipeptídeo L-Alanil-Alanina submetido a deformações homogêneas / Vibrational properties of the dipeptide L-Alanyl-Alanine submitted to homogeneous deformation

Silva, José Gláucio da January 2015 (has links)
SILVA, José Gláucio da. Propriedades Vibracionais do Dipeptídeo L-Alanil-Alanina submetido a deformações homogêneas. 2015. 131 f. Tese (Doutorado em Física) - Programa de Pós-Graduação em Física, Departamento de Física, Centro de Ciências, Universidade Federal do Ceará, Fortaleza, 2015. / Submitted by Edvander Pires (edvanderpires@gmail.com) on 2016-03-18T16:45:00Z No. of bitstreams: 1 2015_tese_jgsilva.pdf: 4602304 bytes, checksum: c589f914ff64a0ac8fd63892133504ba (MD5) / Approved for entry into archive by Edvander Pires(edvanderpires@gmail.com) on 2016-03-18T16:46:19Z (GMT) No. of bitstreams: 1 2015_tese_jgsilva.pdf: 4602304 bytes, checksum: c589f914ff64a0ac8fd63892133504ba (MD5) / Made available in DSpace on 2016-03-18T16:46:19Z (GMT). No. of bitstreams: 1 2015_tese_jgsilva.pdf: 4602304 bytes, checksum: c589f914ff64a0ac8fd63892133504ba (MD5) Previous issue date: 2015 / The dipeptide L-Alanyl – L-Alanine crystal was studied through polarized Raman scattering submitted to homogeneous deformations. The crystals were grown by slow evaporation technique from an aqueous supersaturated solution of the crystal powder. Rays-x diffractions measurements were realized to confirm a crystalline structure of the crystal. Polarized Raman scattering measurements were performed at room temperature, as well as the analysis of the group theory to the C4 factor group and a tentative assignment of the vibrational modes of crystal. Raman scattering measurements in the crystals as a function of temperature were realized between two intervals of temperature: first, at low temperature between 300 K and 11 K e 11 K and 300 K, and second, at high temperature between 300 K e 520 K and 520 K e 300 K, in the spectral range of 50 cm-1 to 3400 cm-1. From the results of low temperature measurements, it was possible to conclude that the crystal undergoes a second-order phase transition between 80 K and 60 K, from a tetragonal structure with C4 factor group to a monoclinic structure with C2 factor group, maintaining the same number of the molecules per primitive cell. The suggested mechanism to explain the phase transition is the occupation of non-equivalent sites by CH3 molecular groups present at Ala-Ala molecule. On the other hand, the crystal remained stable in the high temperature range studied, and the changes observed in the Raman spectra showed no evidence that the Ala-Ala crystal undergone phase transition or changes in molecule conformation. In those experiments were observed only quantitative changes in frequency and widths of the Raman modes, which are normal for any material subjected to variations in temperatures around 220 K. Raman scattering measurements in the crystals as a function of pressure in the pressure range between 0,1 GPa and 6,3 GPa, in compression and of 6,3 GPa and 0,1 GPa, in decompression, in the spectral region between 100 cm-1 and 3400 cm-1 showed two ranges where several qualitative changes occurred; the first, in low pressure interval between 1.7 GPa and 2.3 GPa and the second, at high pressure interval, between 4.5 GPa and 4.9 GPa. Between 1.7 GPa and 2.3 GPa, it was observed qualitative changes as well as the disappearance of an external mode around of 130 cm-1 and the anomalous behavior of other external mode around of 110 cm-1 for pressures of the order of 1,7 GPa. These qualitative changes suggest that the crystal exhibits a second order structural phase transition. Qualitative changes also were observed in others regions of the Raman spectrum through of special reorientation of the molecular groups CO2, CH3 and NH3. These qualitative changes characterize a structural second order phase transition. The mains qualitative changes observed between 4,5 GPa and 5,2 GPa were the disappearance of the external modes and the an large increasing of the width of the Raman modes, suggesting that the crystal exhibits a structural disorder in the crystalline structure when undergoes a phase transition for high pressures, possibly a amorphization. When performing decompression of the sample, the Raman spectrum returns to its initial form relative to pressure of 0,1 GPa indicating reversibility of phase transitions. / O cristal dipeptídeo L-Alanil-L-alanina (Ala-Ala) foi estudado através da técnica de espalhamento Raman polarizado submetido a deformações homogêneas. Os cristais foram crescidos pela técnica de evaporação lenta a partir de uma solução aquosa supersaturada do pó do cristal. Medidas de raios-x foram realizadas para confirmar a estrutura cristalina do cristal. Foram realizadas medidas de espalhamento Raman polarizado a temperatura ambiente, bem como análise da teoria de grupos para o grupo fator C4 juntamente com uma classificação exploratória dos modos normais de vibração do cristal. As medidas de espalhamento Raman foram realizadas em baixas temperaturas, entre 300 K e 11 K e 11 K e 300 K, e altas temperaturas, entre 300 K e 520 K e 520 K e 300 K, na região espectral de 50 a 3300 cm-1. Da análise dos resultados das medidas de baixas temperaturas foi possível concluir que o cristal exibe uma transição de fase de segunda ordem, entre 80 e 60 K, passando continuamente da estrutura tetragonal com grupo fator C4 para uma estrutura monoclínica com grupo fator C2 mantendo o mesmo número de moléculas na célula primitiva. O mecanismo proposto para explicar a transição de fase é a ocupação de sítios de simetria C1 não equivalentes pelos íons moleculares CH3 numa estrutura monoclínica pertencente ao grupo fator C2. O cristal manteve-se estável em todo o intervalo de alta temperatura estudado. Nestas experiências foram observadas apenas mudanças quantitativas nas frequências e larguras de linha dos modos Raman estudados, que é normal para qualquer material submetido a variações de temperaturas da ordem de 220 K. Medidas de espalhamento polarizado no cristal de Ala – Ala no intervalo de pressão entre 0,1 GPa e 6,3 GPa, na compressão, e de 6,3 GPa e 0,1 GPa, na descompressão, na região espectral de 100 cm-1 a 3400 cm-1 mostraram dois intervalos de pressão em que ocorrem diversas mudanças qualitativas; o primeiro entre 1,7 GPa e 2,3 GPa e o segundo entre 4,5 GPa e 4,9 GPa. Entre 1,7 GPa e 2,3 GPa foram observadas mudanças qualitativas significantes na região dos modos externos, tais como, o desaparecimento de um modo da rede em torno de 130 cm-1 e o comportamento anômalo de outro modo da rede em torno de 110 cm-1 para pressão de 1,7 GPa. Estas mudanças qualitativas sugerem que o cristal exibe uma transição de fase estrutural de segunda ordem. As outras regiões do espectro Raman do cristal apresentaram diversas mudanças qualitativas continuas no comportamento dos modos Raman das unidades que participam diretamente das pontes de hidrogênio, indicando que o cristal apresenta reorientações espaciais dos grupos moleculares CO2, CH3 e NH3. Estas mudanças qualitativas caracterizam uma transição de fase estrutural de segunda ordem. As principais mudanças qualitativas observadas entre 4,5 GPa e 5,2 GPa são o desaparecimento dos modos externos e, quantitativamente, um grande aumento na largura de linha dos modos Raman indicando que o cristal exibe uma desordem na estrutura cristalina durante a transição de fase de altas pressões, possivelmente uma amorfização. Na descompressão da amostra os espectros Raman são quase que totalmente recuperados na sua forma inicial indicando que o cristal apresenta transições de fase reversíveis.
670

Relation entre synthèse, microstructure et propriétés électrochimiques d'hydroxydes doubles lamellaires (HDL) / Relationship between synthesis, microstructure and electrochemical properties of double-layered hydroxides (HDL)

Faour, Azzam 23 November 2012 (has links)
Ce travail est consacré à la synthèse de phases d’Hydroxydes Doubles Lamellaire (HDL) [NiAl-CO32-] à morphologies contrôlées et à l’étude de la relation entre leurs propriétés structurales / microstructurales et leurs propriétés électrochimiques. Les phases HDL sont préparées par un nouveau procédé de synthèse, basé sur un traitement hydrothermal en présence d’acides aminés. Nous avons mis en évidence l’influence de plusieurs paramètres de synthèse tels que la quantité d’acide aminé, la concentration de sels métalliques, le pH du milieu ainsi que la température et le temps du traitement hydrothermal ou encore la nature de l’acide aminé. Trois phases présentant différents degrés de cristallinité et différentes morphologies et représentatives des échantillons synthétisés, ont été plus particulièrement étudiées. Leur structure et microstructure ont été déterminées par affinement Rietveld en utilisant des données de diffraction des rayons X à haute résolution enregistrées au synchrotron. Ces résultats de DRX combinés avec les observations en microscopie électronique à transmission (MET) indiquent que l'élargissement des raies de diffraction 00l est principalement dû à des effets de taille, tandis que les effets, à la fois de taille et de micro-contrainte contribuent à l’élargissement anisotrope des autres réflexions hkl. Les micro-contraintes sont attribuées à un phénomène d’interstratification (CO32-/SO42-) et d’intercroissance de deux polytypes 2H1 et 3R1, confirmés et quantifiés à l’aide du logiciel DIFFaX. L’étude des propriétés électrochimiques de ces phases par voltammétrie cyclique a permis de montrer que la présence du motif d’empilement 2H1 induit une nette augmentation du signal électrochimique. / This work is devoted to the synthesis of NiAl-CO32- Layered Double Hydroxide phases (LDH) with controlled morphology and to the study of the relationship between the structural / microstructural and electrochemical properties. The LDH phases are prepared by a new synthetic method, based on the hydrothermal synthesis in presence of amino acids. We have highlighted the influence of various synthetic parameters such as the amount of amino acid, the concentration of metal salts, the pH of the medium, the temperature and time of hydrothermal treatment as well as the amino acid nature. Three phases of different degrees of crystallinity and different morphologies, representative of synthesized samples were particularly studied. Their structures and microstructures were determined by Rietveld refinement using high-resolution synchrotron powder X-ray diffraction (XRD) data. These XRD results combined with transmission electron microscopy (TEM) observations indicate that the broadening of 00l diffraction lines is mainly due to size effects, while both size and micro-strain effects contribute to the anisotropic broadening of the other hkl reflections. The micro-strain are attributed to an interstratification phenomena (CO32-/SO42-) and intergrowth between rhombohedral 3R1 and hexagonal 2H1 polytypes, confirmed and quantified using the software DIFFaX. The electrochemical properties of these phases are also studied by cyclic voltammetry showing that the presence of the 2H1 stacking motifs results in a net increase of the electrochemical signal.

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