Le récepteur du glutamate de type NMDA (NMDAR) est l'un des deux principaux récepteurs glutamatergiques, et donc un des principaux mediateurs de la neurotransmission excitatrice dans le système nerveux central. Les NMDARs sont impliqués dans la plasticité synaptique, le corrélat cellulaire de l'apprentissage et de la mémoire. Actuellement, la technologie de pointe permettant l'investigation des propriétés des récepteurs synaptiques dans leur environnement natif est la photolyse de composés chimiques cagés, mais cet outil a des limitations concernant sa capacité à stimuler des NMDAR de manière très précise spatiellement et temporellement, à cause de la limite de diffraction de la lumière, qui définit le volume minimal de décageage duquel les molécules diffusent, et à cause de la nature irréversible de la réaction de décageage. En revanche, les molécules photoréversibles peuvent être activées et désactivées rapidement et de manière repétée, ce qui permet d'éviter les limitations de la diffusion afin d'accomplir une stimulation plus précise au niveau spatial et temporel. J'ai établi une collaboration autour du premier composé chimique photoréversible spécifique pour les NMDAR, et de plus, le premier qui est inactif dans son état le plus stable : l'azobenzene triazole glutamate (ATG). J'ai caracterisé ce composé chimique par activation un-photon et bi-photon, par l'application en bain et l'application locale, et dans plusieurs paradigmes expérimentaux. Dans ma thèse, je décris le fonctionnement de ce composé chimique, ses avantages et ses inconvénients, et certaines modifications à considérer pour l'optimisation future des composés chimiques photoréversibles. / The NMDA-type glutamate receptor (NMDAR) is one of two principal glutamate receptors, the main mediators of excitatory neurotransmission in the central nervous system. NMDARs are critically implicated in synaptic plasticity, the cellular correlate of learning and memory. Although significant advances have been made in understanding the behavior of this receptor, many questions remain. Currently, the state-of-the-art technology for investigating receptor properties in the native environment is caged compounds, which are restricted in their ability to precisely control the spatial and temporal activation of NMDAR due to the diffraction limit of light, which defines the minimum volume of uncaging from whence uncaging molecules diffuse, and the irreversible nature of uncaging. Photoswitchable molecules, by contrast, can rapidly and repeatedly be switched on and off, circumventing the diffusion limitation to permit fine spatial and temporal control of receptor activation. With this in mind, I formed a collaboration with a team of chemists to characterize a novel compound, azobenzene triazole glutamate (ATG), the first photoswitchable compound specific for NMDAR and biologically inert in its thermally stable state. Such a tool holds great promise for finely probing receptor behavior in its native environment. I characterized this compound using one- and two-photon activation, through bath and local application, and through a variety of different experimental paradigms. I demonstrate in detail the properties of this novel compound, propose potential applications of ATG as a novel tool, and suggest possible modifications to optimize future photoswitchable compound design.

Long-term depression (LTD) induced by low frequency stimulation (LFS; 900x1Hz) at medial perforant path (MPP) synapses in the rat dentate gyrus (DG) has been described as both developmentally regulated and N-methyl D-aspartate receptor (NMDAr) independent, yet sufficient evidence suggest that the processes is not entirely independent of NMDAr activity. In the present study, in vitro DG-LTD LFS was induced in hippocampal slices prepared from rats at postnatal day (PND) 14, 21 and 28 to investigate how the sensitivity of DG-LTD~LFS to the NMDAr antagonist amino-5-phosphonovaleric acid (AP5; 50µM) changes throughout the juvenile developmental period (jDP; PNDs 12-29) that occurs immediately after the period of peak neurogenesis. We further examined the acute effects of the partial NMDAr antagonist ethanol (EtOH) on DG-LTD LFS and NMDAr excitatory post synaptic currents (NMDAr-EPSCs) in dentate granule cells (DGCs) using 50 and 100mM concentrations (50mM ~0.2%BAC) of EtOH. The magnitude of LTD induced at all three time points was not statistically different between age groups, but the probability of successfully inducing LTD did decrease with age. We found that AP5 was insufficient to inhibit DG-LTD LFS at PND14, but significantly inhibited DG-LTD LFS at PND21 and PND28. We also found that 50mM EtOH, but not 100mM EtOH, significantly attenuated the mag-nitude of DG-LTD LFS induced at each time point. Acute effects of 50mM EtOH had relatively little effect on NMDAr-EPSCs at PND14, and showed a slight potentiation of the response at PND21. 50mM EtOH at PND28, and 100mM EtOH at all three developmental time points showed inhibition of the NMDAr-EPSC. These findings provide insight on how developmental changes to the DG network and dentate gran-ule cells (DGCs) influences mechanisms and processes involved in the induction and expression of synaptic plasticity in the DG. / Graduate

Major depressive disorder (MDD) is a growing health problem. Current treatment options are not always effective and take several weeks of regular administration before an improvement can be seen in symptoms. Sub-anaesthetic doses of ketamine have been found to have antidepressant effects in previously treatment-resistant MDD after just one dose. However, ketamine also produces short term psychosis-like side effects which are undesirable for MDD patients. Ketamine is known to be an NMDA receptor antagonist, binding within the channel pore to block ion flow, however the molecular mechanism(s) underlying its antidepressant and psychosis-like effects are still unclear. In this thesis several genetically modified mouse lines were used to probe the molecular events involved in ketamine's actions. Firstly, a mouse line in which the c-terminal domain (CTD) of the NMDAR subtype GluN2B had been replaced with that of GluN2A, and a second line in which the opposite replacement had taken place, were used to investigate the role of the CTD in the NMDAR response to ketamine. It was found that the GluN2B CTD is required for the short-term psychosis-like response to a sub-anaesthetic dose of ketamine. This is interesting as the channel pore region, containing the binding site for ketamine, is unaltered in these mutants. Therefore, this finding implicates GluN2B CTD specific intracellular signalling molecules in this action of ketamine and raises the question of whether the CTD itself is able to respond to ketamine binding within the pore to induce signalling changes, perhaps via a conformational change. Secondly, a mouse line, in which the activity-regulated synaptic protein Arc has been tagged with a fluorescent marker, was used to investigate the response of synapses to both anaesthetic and sub-anaesthetic doses of ketamine. In this experiment tagged Arc protein was visible as punctate accumulations at synapses. A novel method termed 'synaptome mapping' was used to image these accumulations across entire coronal sections and to quantify their number, size and intensity. Using this method alterations to the Arc synaptome map were detected 1h, 6h and 24h following ketamine administration. The two doses used produced different changes to this map, with the sub-anaesthetic antidepressant dose inducing increases in Arc puncta number across many brain regions, whereas the anaesthetic dose induced short term (1h) increases followed by longer term decreases in Arc puncta number. This finding links long-term increases in Arc at the synapse with an antidepressant response to ketamine.

Our memories are fundamental components of who we are as individuals. They influence almost every aspect of our lives such as our decisions, our personalities, our emotions, and our purpose in life. Diseases that affect memory have devastating impacts on the individuals who bear them. Imagine not being able to recall pleasant memories or even the faces of close family members. It's important to understand the biology of memory formation not only because it's an intriguing scientific question, but because of its consequences when these processes are lost. N-methyl-D-aspartate-type glutamate receptors (NMDARs) and calcium/calmodulin-dependent kinase II (CaMKII) are essential molecules involved in learning and its physiological correlate, synaptic plasticity. Calcium influx through NMDARs activates CaMKII, which translocates to the postsynaptic signaling sites through its interactions with the NMDAR subunits NR1 and NR2B. The significance of CaMKII's translocation is not fully known, however we hypothesize that it is an early molecular event that is necessary for the expression of synaptic plasticity and learning. Our laboratory has developed two strains of mice with targeted mutations to NR1 and NR2B (NR1KI and NR2BKI) that are deficient in their ability to bind to CaMKII to test the role of CaMKII binding to NMDARs in synaptic plasticity and learning. We found that CaMKII binding to NR2B is necessary for long-term potentiation (LTP), the most commonly studied form of synaptic plasticity. NR2BKI mice are able to learn spatial and cued tasks normally, however they are unable to consolidate spatial tasks for long-term memory storage. On the other hand, we found that CaMKII binding to NR1 is not necessary for LTP. Furthermore NR1KI mice do not show impairments in contextual or cued learning. We found that NR1 mutations resulted in an age-dependent truncation of the intracellular domains of NR1 that reduced its activity leading to severe impairments in synaptic transmission, LTP, and learning. Our results suggest that CaMKII binding to NR2B is the more important for synaptic plasticity and memory formation than NR1. However, we found that the intracellular domains of NR1 are critical for NMDAR and synapse function.

NOS1, das für die neuronale Stickstoffmonoxidsynthase (NOS-I) kodierende Gen, konnte bislang durch eine stetig wachsende Zahl an Untersuchungen mit verschiedenen Pathomechanismen bedeutsamer neurologischer und psychiatrischer Erkrankungen in Verbindung gebracht werden. Der Dinukleotid-Polymorphismus im Promotergen von NOS1, für welchen in der Population verschieden lange Allelen existieren, war bislang bezüglich der durch ihn vermittelten Wirkungen kaum untersucht. Um die Relevanz und Funktionalität des Promoterpolymorphismus NOS1 Ex1f-VNTR zu erforschen, wurde in der vorliegenden Arbeit ein Reportergen-Assay durchgeführt, der den Einfluss verschieden langer Allele auf transkriptionaler Ebene verdeutlichen sollte. Hierfür wurden NOS1 Exon 1f-Promoterregionen mit unterschiedlich langen VNTRs in einen Luciferase-Genvektor kloniert und der Einfluss der verschiedenen Allellängen auf die Aktivität des Reportergens ermittelt. Hierbei zeigte sich der Einfluss der Allele dergestalt, dass das Vorhandensein kurzer Allele des NOS1 Ex1f-VNTR in verminderter Aktivität des Reportergens resultierte. Durchgeführte Stimulationsversuche mit Östrogen und Forskolin ergaben hingegen keine signifikante Änderung der Transkriptionsaktivität. Im DNA-Microarray konnten mit kurzen Allelen des NOS1 Ex1f-VNTR assozierte Alterationen im Transkriptom des humanen Brodmann-Areals 46 nachgewiesen werden, was Wechselwirkungen zwischen dem Vorhandensein kurzer Allele des NOS1 Ex1f-VNTR und der Gentranskription psychiatrisch relevanter Gene demonstriert. Die Ergebnisse der vorliegenden Arbeit zeigen, dass der NOS1 Ex1f-VNTR Einfluss auf transkriptionaler Ebene ausübt und mit psychiatrischen Krankheiten assoziiert ist, was ihn weiterhin zu einem wichtigen Forschungsobjekt macht und in die Gruppe klinisch bedeutsamer Polymorphismen einreiht. / NOS1, the coding gene for the neuronal nitric oxide synthase (NOS-I), has been linked to various pathomechanisms of neurologic and psychiatric disorders by a steadily growing body of work. The dinucleotide polymorphism contained in the NOS1 promotergene, existing in a variety of allelic lengths, has so far been rarely investigated in terms of influence. To determine transcriptional functionality and relevance of different lengths of the promoter polymorphism NOS1 Ex1f-VNTR, a reporter gene assay has been carried out in the herein presented study. By cloning NOS1 Ex1f-VNTR promoter regions containing different lenghts oft the VNTR in a Luciferase-gene vector, the influence of different promoter alleles on reporter gene activity has been demonstrated. A reduced reporter gene activity has been shown in the presence of short alleles of the NOS1 Ex1f-VNTR. Accomplished trials of stimulating activity via estrogene and forskoline treatment resulted in no further changes of repoter gene activity. In DNA-Microarray studies an association of short NOS1 Ex1f-VNTR alleles and transcriptome alterations in human Brodmann area 46 has been detected, indicating a correlation of short NOS1 Ex1f-VNTR alleles and transcription of genes involved in psychiatric disorders. These results demonstrating the functionality of the NOS1 Ex1f-VNTR confirm its clinical relevance and the importance of its further investigation.

Methoden der Fluoreszenz-Lokalisationsmikroskopie (engl. single-molecule localization microscopy, SMLM) ermöglichen es Moleküle zu quantifizieren und deren Verteilung zu analysieren. Im Rahmen dieser Arbeit wurden verschiedene Membranmoleküle auf unterschiedlichen eukaryotischen Zellen, aber auch auf Prokaryoten mit dSTORM (engl. direct stochastic optical reconstruction microscopy) oder PALM (engl.: photoactivated localization microscopy) aufgenommen und quantifiziert. Bevor jedoch diese hochauflösende fluoreszenzbasierte Technik für biologische Fragestellungen angewendet werden konnten, mussten zunächst potentielle Artefakt-auslösende Quellen identifiziert und Strategien gefunden werden, um diese zu eliminieren. Eine mögliche Artefakt-Quelle ist eine zu niedrige Photonenzahl, die von Fluorophoren emittiert wird. Werden zu wenige Photonen detektiert, kann die Lokalisation eines Fluorophors weniger präzise bestimmt werden. Dies kann zu einer falschen Abbildung von Strukturen führen oder zu falschen Rückschlüssen über die Verteilung von Molekülen. Eine Möglichkeit die Anzahl der emittierten Photonen zu erhöhen, ist chemische Additive als Triplettlöscher einzusetzen. Sie bewirken, dass die Fluorophore wieder in den Grundzustand relaxieren und somit wieder angeregt werden können. Es wurden verschiedene Additive, die in der Literatur als Triplettlöscher beschrieben sind, getestet. Dazu wurden zunächst ihre Auswirkungen auf den Triplettzustand verschiedener Fluorophore (Alexa Fluor (Al) 488, 532 und 647 und Atto655) mit Hilfe von Fluoreszenzkorrelationsspektroskopie (FCS) untersucht. Cyclooctatetraen (COT) bewirkte dabei eine Abnahme der Triplettausbeute von Al488, Al532 und Al647 um ~ 40-60%, bei Atto655 veränderte sie sich nicht. Obwohl die Ergebnisse der FCS-Messungen darauf hindeuten, dass COT in einer erhöhten Anzahl an emittierten Photonen resultiert, konnte dies bei dSTORM-Messungen nicht bestätigt werden. Hier hatte COT nur einen größeren positiven Effekt auf das Fluorophor Al647 (Zunahme um ~ 60%). Eine Erklärung für diese Widersprüchlichkeit zu den Ergebnissen aus den FCS-Messungen, könnte das Vorhandensein des Schaltpuffers bei dSTORM-Messungen sein. Dieser bewirkt den Übergang der Fluorophore in den Aus-Zustand bzw. entzieht dem Puffer Sauerstoff. Bei der Zugabe von 5 mM Kaliumiodid (KI) nahm die Triplettamplitude bei FCS-Messungen nur bei Al488 ab (um ~ 80%). Eine geringe Steigerung (um ~ 10%) der Intensität von Al488 mit KI konnte bei dSTORM-Messungen mit niedrigen Konzentrationen (~ 0,5 mM) erzielt werden. Bei einer Konzentration von 5 mM sank die Intensität jedoch wieder um 40%. Deuteriumoxid (D2O) soll, anders als die Triplettlöscher, eine Verbesserung der Photonenausbeute dadurch bewirken, dass strahlungslose Relaxationsprozesse minimiert werden. Mit dSTORM-Messungen konnte gezeigt werden, dass Atto655 und Al647 in D2O zwar pro An-Zustand mehr Photonen emittieren als in Schaltpuffer ohne D2O, da die Fluorophore hier jedoch schneller bleichen, letztendlich die gleiche Anzahl an Photonen detektiert werden. Um die Anzahl an emittierten Photonen zu erhöhen, eignet sich also nur COT bei dSTORM-Messungen mit AL647 und KI in sehr geringen Konzentrationen bei Al488. D2O kann eingesetzt werden, wenn eine Probe schnell vermessen werden muss, wie zum Beispiel bei Lebendzellmessungen. Nicht nur eine zu niedrige Photonenzahl, auch eine zu geringe Photoschaltrate kann Artefakte bei dSTORM-Messungen erzeugen. Dies wurde anhand von verschiedenen biologischen Strukturen, die mit unterschiedlichen Anregungsintensitäten aufgenommen wurden, deutlich gemacht. Besonders die Aufnahmen von Plasmamembranen sind anfällig für die Generierung von Artefakten. Sie weisen viele inhomogene und lokal dichte Regionen auf. Wenn nun mehr als ein Emitter pro µm² gleichzeitig an ist, erzeugt das Auswertungsprogramm große artifizielle Cluster. Die hier durchgeführten Messungen machen deutlich, wie wichtig es ist, dSTORM-Bilder immer auf mögliche Artefakte hin zu untersuchen, besonders wenn Moleküle quantifiziert werden sollen. Dafür müssen die unbearbeiteten Rohdaten sorgfältig gesichtet werden und notfalls die Messungen mit einer höheren Laserleistung wiederholt werden. Da dSTORM mittlerweile immer mehr zur Quantifizierung eingesetzt wird und Clusteranalysen durchgeführt werden, wäre es sinnvoll bei Veröffentlichungen die Rohdaten von entscheidenden Aufnahmen der Öffentlichkeit zur Verfügung zu stellen. Die Färbemethode ist ein weiterer Punkt, durch den Artefakte bei der Abbildung von Molekülen mittels SMLM entstehen können. Häufig werden Antikörper zum Markieren verwendet. Dabei sollte darauf geachtet werden, dass möglichst kleine Antikörper oder Antikörperfragmente verwendet werden, besonders wenn Clusteranalysen durchgeführt werden sollen. Anderenfalls leidet die Auflösung darunter, bzw. erhöht sich die Gefahr der Kreuzvernetzung von Molekülen. Im zweiten Teil der vorliegenden Arbeit, wurden Plasmamembran-Ceramide untersucht. Ceramide gehören zu den Sphingolipiden und regulieren diverse zelluläre Prozesse. Verschiedene Stimuli bewirken eine Aktivierung von Sphingomyelinasen (SMasen), die Ceramide in der Plasmamembran synthetisieren. Steigt die Konzentration von Ceramiden in der Plasmamembran an, kondensieren diese zu Ceramid-reichen Plattformen (CRPs). Bisher ist noch wenig über die Verteilung der Ceramide und die Größe der CRPs bekannt. Sie wurden hier über IgG-Antikörper in der Plasmamembran von Jurkat-, U2OS-, HBME- und primären T-Zellen angefärbt und erstmals mit dSTORM hochaufgelöst, um sie dann zu quantifizieren. Unabhängig von der Zelllinie befanden sich 50% aller Ceramidmoleküle in ~ 75 nm großen CRPs. Im Mittel bestanden die CRPs aus ~ 20 Ceramiden. Mit Hilfe einer Titrationsreihe konnte ausgeschlossen werden, dass diese Cluster nur durch die Antikörper-Färbung artifiziell erzeugt wurden. Bei Inkubation der Zellen mit Bacillus cereus Sphingomyelinase (bSMase) stieg die Gesamtkonzentration der Ceramide in der Plasmamembran an, ebenso wie die Ceramidanzahl innerhalb der CRPs, außerdem die Anzahl und Größe der CRPs. Dies könnte zu einer Veränderung der Löslichkeit von Membrankomponenten führen, was wiederum eine Akkumulation bestimmter Rezeptoren oder eine Kompartimentierung bestimmter Proteine erleichtern könnte. Die Anhäufung der Ceramide in den CRPs könnte ebenfalls die lokale Interaktion mit anderen Membranmolekülen erleichtern und dadurch möglicherweise die Reaktivität von Rezeptoren verändern. Mittels Azid-modifizierten Ceramidanaloga und kupferfreier Click-Chemie wurden Plasmamembran-Ceramide auch in lebenden Jurkat-Zellen mit Hilfe konfokaler Laser-Raster-Mikroskopie (CLSM, engl. confocal laser scanning microscopy) und Strukturierter Beleuchtungsmikroskopie (SIM, engl. structured illumination microscopy) untersucht. Dabei konnte gezeigt werden, dass die Fettsäure-Kettenlänge und die Position des Azids bei den Ceramidanaloga eine entscheidende Rolle spielt, wie hoch das detektierte Signal in der Plasmamembran letztendlich ist. Die Versuche machen auch deutlich, dass die klickbaren Ceramidanaloga lebendzellkompatibel sind, sodass sie eine hervorragende Möglichkeit darstellen, zelluläre Reaktionen zu verfolgen. Es wurden hier nicht nur Ceramide in eukaryotischen Zellen analysiert, sondern auch in Bakterien. Neisseria meningitidis (N. meningitidis) sind gramnegative Bakterien, die im Menschen eine Sepsis oder eine Meningitis auslösen können. Es wurde mittels immunhistochemischen Färbungen mit dem anti-Ceramid IgG-Antikörper, aber auch mit den klickbaren Ceramidanaloga, ein Signal in der Membran erhalten, was mit dSTORM hochaufgelöst wurde. In anderen Bakterien wurden ebenfalls schon Sphingolipide nachgewiesen. Studien zu Ceramiden in N. meningitidis wurden bisher jedoch noch nicht veröffentlicht. Im Rahmen dieser Arbeit konnten erstmals Ergebnisse erhalten werden, die darauf hinweisen, dass N. meningitidis ebenfalls Ceramide besitzen könnten. In einem dritten Projekt wurde die Interaktion zwischen NK-Zellen und Aspergillus fumigatus untersucht. Der Schimmelpilz kann eine Invasive Aspergillose in immunsupprimierten Menschen auslösen, was zum Tod führen kann. Verschiedene Studien konnten schon zeigen, dass NK-Zellen eine wichtige Rolle bei der Bekämpfung des Pilzes spielen. Der genaue Mechanismus ist jedoch noch unbekannt. Im Rahmen dieser Arbeit konnte nachgewiesen werden, dass der NK-Zell-Marker CD56 entscheidend für die Pilzerkennung ist. Mit immunhistochemischen Färbungen und LSM-, aber auch dSTORM-Messungen, konnte gezeigt werden, dass die normalerweise homogen verteilten CD56-Rezeptoren auf der Plasmamembran von NK-Zellen aktiv an die Interaktionsstelle zu A. fumigatus transportiert werden. Mit der Zeit akkumulieren hier immer mehr CD56-Proteine, während das Signal in der restlichen Membran immer weiter abnimmt. Es konnte erstmals CD56 als wichtiger Erkennungsrezeptor für A. fumigatus identifiziert werden. In dem letzten bearbeiteten Projekt, wurde die Bindung von Anti-N-Methyl-D-Aspartat (NMDA)-Rezeptor Enzephalitis Autoantikörper an Neuronen untersucht. Bei einer Anti-NMDA-Rezeptor Enzephalitis bilden die Patienten Autoantikörper gegen die NR1-Untereinheit ihrer eigenen postsynaptischen NMDA-Rezeptoren. Da die Krankheit oft sehr spät erkannt wird und die Behandlungsmöglichkeiten noch sehr eingeschränkt sind, führt sie noch oft zum Tod. Sie wurde erst vor wenigen Jahren beschrieben, sodass der genaue Mechanismus noch unbekannt ist. Im Rahmen dieser Arbeit, konnten erste Färbungen mit aufgereinigten Antikörper aus Anti-NMDA-Rezeptor Enzephalitis Patienten an NMDA-Rezeptor-transfizierte HEK-Zellen und hippocampalen Maus-Neuronen durchgeführt und mit dSTORM hochaufgelöst werden. Mit den Messungen der HEK-Zellen konnte bestätigt werden, dass die Autoantikörper an die NR1-Untereinheit der Rezeptoren binden. Es konnten erstmals auch die Bindung der Antikörper an Neuronen hochaufgelöst werden. Dabei wurde sichtbar, dass die Antikörper zum einen dicht gepackt in den Synapsen vorliegen, aber auch dünner verteilt in den extrasynaptischen Regionen. Basierend auf der Ripley’s H-Funktion konnten in den Synapsen große Cluster von ~ 90 nm Durchmesser und im Mittel ~ 500 Lokalisationen und extrasynaptisch kleinere Cluster mit einem durchschnittlichen Durchmesser von ~ 70 nm und ~ 100 Lokalisationen ausgemacht werden. Diese ersten Ergebnisse legen den Grundstein für weitere Messungen, mit denen der Mechanismus der Krankheit untersucht werden kann. / With single molecule localization microscopy (SMLM) quantification of molecules and the analysis of their distribution becomes possible. In this work various plasma membrane molecules of different eukaryotic and prokaryotic cells were imaged with dSTORM (direct stochastic optical reconstruction microscopy) or PALM (photoactivated localization microscopy) and quantified. To use these super-resolution fluorescence microscopy techniques and answer elaborate biological questions, potential sources of artifacts were identified and strategies to circumvent them developed. A possible source of artifacts is an insufficient number of photons emitted by fluorophores. If less photons are detected, determining the localization of one fluorophore is less precise. This can cause a wrong reconstruction of structures or might lead to false conclusions about the distribution of molecules. One possibility to increase the number of photons is to use chemical additives which quench the triplet state of fluorophores. They ensure that the fluorophores relax into the ground state allowing them to become excited again. Different additives, described in literature as triplet quenchers, were tested. The effects of these additives on the triplet state of different fluorophores (Alexa Fluor (Al) 488, 532 und 647 und Atto655) were analyzed with fluorescence correlation spectroscopy (FCS). Cyclooctatetraene (COT) resulted in a decrease of triplet state yield of Al488, Al532 and Al647 by ~ 40-60%, yet the triplet state of Atto655 was unaffected. FCS measurements indicated that COT results in an increased number of emitted photons, but dSTORM measurements could not confirm this finding. Here, COT only revealed a positive effect on the intensity of Al647 (increase by ~ 60%). An explanation for this inconsistency with the FCS results might be the presence of the switching buffer in dSTORM measurements. The buffer is designed to cause a transition of the fluorophores to and stabilize the off-state by removing oxygen from the sample, counteracting the effect of COT. On addition of 5 mM potassium iodide (KI) only Al488 fluorophores showed a decreased triplet state rate (~ 80%) in FCS measurements. This finding was confirmed by dSTORM measurements with low concentrations (~ 0.5 mM) of KI which resulted in a slight intensity increase (~ 10%) of Al488. Higher KI concentration (5 mM) on the other hand showed a reversed effect, resulting in a drop in intensity by ~ 40%. Deuterium oxide (D2O) isn’t a triplet quencher but should minimize non-radiative processes. DSTORM measurements with Atto665 and Al647 revealed, that D2O does not affect the total number of emitted photons per fluorophore. Instead, D2O increased the amount of emitted photons per time. In a nutshell, these results show that dSTORM measurements with Al647 can be improved using COT, and measurements with Al488 by using very low concentrations of KI. If needed, D2O can speed up dSTORM acquisition time considerably, e.g. for life cell measurements. In addition to an insufficient number of collected photons, inappropriate photoswitching rates can induce artifacts in dSTORM measurements as well. This was shown using various biological reference structures. Especially the imaging of plasma membranes is prone to generate artifacts. Plasma membranes exhibit a lot of intrinsically three-dimensional structures with high local emitter densities. In these regions of higher fluorophore densities the likelihood of two close fluorophores emitting at the same time is increased. This in turn can result in large artificial clusters due to misinterpretation by the reconstruction software. Taken together, the performed experiments show how important it is to prove dSTORM images and minimize possibility image artifacts. Thus, raw data movies need to be examined carefully and, if necessary, measurements must be repeated with adapted imaging conditions. Since dSTORM is increasingly used for quantification and cluster analysis it is recommended to publish raw data in the Supporting information of the manuscript. Another source of artifacts when imaging molecules with SMLM is the staining procedure. Usually antibodies are used to label biological structures for dSTORM. In the interest of resolution, small antibodies or just fragments of antibodies should be used, especially if cluster analysis is performed. Otherwise reduced resolution or an increase in cross-linking of molecules might occur. In the second part of this study plasma membrane ceramides were investigated. Sphingolipid ceramides regulate various cellular processes. Different stimuli initiate activation of sphingomyelinases (SMase) which synthesize ceramides at the plasma membrane. A rise in ceramide concentration leads to a condensation of them in ceramide-rich platforms (CRPs). So far, only little is known about the distribution and the size of CRPs. Here, plasma membrane ceramides of Jurkat-, U2OS-, HBME- and primary T-cells were stained with an IgG-antibody, imaged using dSTORM and their distribution quantitatively analyzed. Independent of the analyzed cell line, ~ 50% of all ceramides detected in the plasma membrane formed CRPs with a size of ~ 75 nm. On average one CRP consisted of ~ 20 ceramide molecules. Using a titration series the possibility of artificial cluster generation due to antibody staining was ruled out. Treatment of cells with Bacillus cereus sphingomyelinase (bSMase) increased the overall ceramide concentration in the plasma membrane, the number of ceramides in the CRPs as well as the quantity and the size of CRPs. This might result in a higher solubility of membrane components in CRPs which in turn could facilitate accumulation or compartmentation of certain proteins. Accumulation of ceramides in the CRPs could also enable local interaction with other molecules and possibly change the reactivity of some receptors. To investigate plasma membrane ceramides in living cells azido-modified ceramides and copper-free click chemistry were used for labeling. Imaging was performed using confocal laser-scanning microscopy (LSM) and structured illumination microscopy. It was shown that the length of fatty acid chains and the position of the azido group of ceramide analogues play a decisive role in the magnitude of the detected signal in the plasma membrane. These results demonstrate that azido-functionalized ceramides are live-cell compatible, making them an excellent tool to follow cellular reactions. In this study, ceramides were not only analyzed in eukaryotic cells but in bacteria as well. Neisseria meningitidis (N. meningitidis) are gram-negative bacteria triggering sepsis or meningitis in humans. Using both immunolabeling with anti-ceramide IgG-antibodies and azido-modified ceramides, ceramides were detected for the first time in the membrane of N. meningitidis by dSTORM. Although sphingolipids were reported to exist in various bacterial membranes, studies about ceramides in N. meningitidis have not yet been published. The results obtained here suggest the presence of ceramides in N. meningitidis. The third part of this thesis addresses the interaction between NK cells and Aspergillus fumigatus. The mold can cause invasive aspergillosis in immunocompromised patients which can lead to death. Various studies have already shown that NK cells play a crucial role in the clearance of the fungal infection. Still, the exact mechanism remains unknown. As part of this work the NK cell marker CD56 was identified as a decisive receptor in recognition of the mold. Using LSM and dSTORM measurements in combination with immunocytochemical staining an active transport of the usually homogenous distributed CD56 receptors to the interaction site of NK cells and fungus was detected. Over time CD56 proteins accumulate at these interaction sites while the signal in the rest of the membrane continuously decreases. For the first time this study was able to identify CD56 as an important recognition receptor for A. fumigatus. In the last project binding of anti-N-Methyl-D-aspartate (NMDA) receptor encephalitis autoantibodies were investigated in neurons. Patients with this form of encephalitis generate autoantibodies against the NR1 subunit of their own postsynaptic NMDA receptors. Since NMDA receptor encephalitis is often diagnosed too late and treatment options are limited the disease often proves to be fatal. Anti-NMDA receptor encephalitis was described quite recently, explaining why the exact mechanism remains still unknown. For this study purified antibodies from anti-NMDA receptor encephalitis patients were used to stain NMDA receptor transfected HEK cells and hippocampal mouse neurons. These samples were subsequently imaged with dSTORM and analyzed. Measurements on HEK cells confirmed that the autoantibodies bind to the NR1 subunit. Using dSTORM, the binding sites of these antibodies at the neurons were imaged for the first time with super-resolution microscopy. The receptors are densely localized in synapses and more equally distributed at lower density in extrasynaptic regions. Based on Ripley’s H function synaptic clusters with a diameter of ~ 90 nm and ~ 500 localizations were determined while the extrasynaptic smaller clusters have a median diameter of ~ 70 nm and ~ 100 localizations per cluster. These first results form the basis for further investigations on the mechanism of anti-NMDA receptor encephalitis.

The experiments reported in this thesis studied the contributions of opioid and NMDA receptors to predictive fear learning, as measured by freezing in the rat. The first series of experiments (Chapter 2) used a within-subject one-trial blocking design to study whether opioid receptors mediate a direct action of predictive error on Pavlovian association formation. Systemic administrations of the opioid receptor antagonist naloxone or intra-vlPAG administrations of the selective μ-opioid receptor antagonist CTAP prior to Stage II training prevented one-trial blocking. These results show for the first time that opioid receptors mediate the direct actions of predictive error on Pavlovian association formation. The second series of experiments (Chapter 3) then studied temporal-difference prediction errors during Pavlovian fear conditioning. In Stage I rats received CSA ?? shock pairings. In Stage II they received CSA/CSB ?? shock pairings that blocked learning to CSB. In Stage III, a serial overlapping compound, CSB → CSA, was followed by shock. The change in intra-trial durations supported fear learning to CSB but reduced fear of CSA, revealing the selective operation of temporal-difference prediction errors. This bi-directional change in responding was prevented by systemic NMDA receptor antagonism prior to Stage III training. In contrast opioid receptor antagonism differentially affected the learning taking place during Stage III, enhancing learning to CSB while impairing the loss of fear to CSA. The final series of experiments (Chapter 4) then examined potential neuroanatomical loci for the systemic effects reported in Chapter 3. It was observed that intra-BLA infusion of ifenprodil, an antagonist of NMDA receptors containing the NR2B subunit, prevented all learning during Stage III, whereas intra-vlPAG infusion of the μ-opioid receptor antagonist CTAP facilitated learning to CSB but impaired learning to CSA. These results are consistent with the suggestion that opioid receptors in the vlPAG provide an important contribution to learning. Importantly, this contribution of the vlPAG is over and above its role in producing the freezing conditioned response. Furthermore, the findings of this thesis identify complementary but dissociable roles for amygdala NMDA receptors and vlPAG μ-opioid receptors in predictive fear learning.

In previous studies the carboxyl-terminus of microtubule-associated protein 1S was shown to interact with the N-methyl-D-aspartate receptor subunit NR3A (Eriksson et. al.)1.  In this study, interactions between three truncations of the microtubule-associated proteins 1B and one truncation of the microtubule-associated protein 1S carboxyl-terminus and the N-methyl-D-aspartate receptor subunits NR1 and NR3A were examined. The study showed that an interaction occurred between amino acids 2167 to 2365 of the microtubule-associated protein 1B and NR3A.  That region of microtubule associated protein 1B corresponds to a microtubule-binding region in the light chain. It has been shown in earlier studies (Reviewed in Halpain S. et a12, Riederer, BM.  et.al3.) that the light chain is a active part of the protein that have been post translational cleaved. The MAP 1 proteins are present in all tissue but has higher concentrations in the Post Synaptic Density of neurons in the central nervous system.  The N-methyl-D-aspartate receptors are present in glial cells and in the dendritic shafts of the central nervous system neurons (Eriksson et. al.)1 . The diseases were these proteins may play a part is mainly memory destructive diseases such as Alzheimers disease and in muscular dystrophy, but these assumptions are still being speculated.

The sigma-1 receptor (σ-1R) is an endoplasmic reticulum (ER) protein that modulates a number of ion channels. It is hypothesized that σ-1Rs activated with agonist translocate to the plasma membrane. The σ-1R potentiates N-methyl-D-aspartate Receptors (NMDARs), important constituents of synaptic plasticity. NMDARs are anchored in the plasma membrane by Postsynaptic Density Protein-95 (PSD-95). The mechanism behind σ-1R modulation of NMDARs is not known. The results of my investigation confirm that σ-1Rs localize extrasomatically. Following σ-1R activation, σ-1R localization to dendrites and postsynaptic densities (PSDs) is upregulated. Unpublished work from our lab has shown that σ-1Rs associate with PSD-95 and NMDARs. Furthermore, immunocytochemistry (ICC) showed σ-1R colocalization with PSD-95 and NMDAR subunits. After σ-1R activation there was significantly increased colocalization between σ-1R, PSD-95, and GluN2B. Overall, this study may have provided insight into the molecular mechanism behind σ-1R modulation of NMDARs, which could have implications in the understanding of synaptic plasticity.

<p>At excitatory synapses, NMDAR-mediated synaptic plasticity occurs in response to activity inputs by modifying synaptic strength. While comprehensive studies have been focused on the induction and expression mechanisms underlying synaptic plasticity, it is less clear whether and how synaptic plasticity itself can be subjected to regulations. The presence of "plasticity of plasticity", or meta-plasticity, has been proposed as an essential mechanism to ensure a proper working range of plasticity, which may also offer an additional layer of information storage capacity. However, it remains elusive whether and how meta-plasticity occurs at single synapses and what molecular substrates are locally utilized. Here, I develop systems allowing for sustained alterations of individual synaptic inputs. By implementing a history of inactivity at single synapses, I demonstrate that individual synaptic inputs control synaptic molecular composition homosynaptically, while allowing heterosynaptic integration along dendrites. Furthermore, I report that subunit-specific regulation of NMDARs at single synapses mediates a novel form of input-specific metaplasticity. Prolonged suppression of synaptic releases at single synapses enhances synaptic NMDAR-mediated currents and increases the number of functional NMDARs containing NR2B. Interestingly, synaptic NMDAR composition is adjusted by spontaneous glutamate release rather than evoked activity. I also demonstrate that inactivated synapses with more NMDARs containing NR2B acquire a lower induction threshold for long-term synaptic potentiation. Together, these results suggest that at single synapses, spontaneous release primes the synapse by modifying its synaptic state with specific molecular compositions, which in turn determine the synaptic gain in an input-specific manner.</p> / Dissertation