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The Effects of the H-NS Protein on PhoP-dependent Transcriptional Regulation of the mgtCBRU-cigR Operon in Salmonella enterica serovar TyphimuriumJazmin L Marks-Burns (12468483) 27 April 2022 (has links)
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<p>PhoQP is a two-component system that regulates the transcription of ~5% of the genes of <em>Salmonella enterica</em>. The membrane-bound PhoQ protein is phosphorylated in response to low extracellular Mg<sup>2+</sup> concentration, acid pH, and a number of antimicrobial peptides. The inorganic phosphate bound to PhoQ is transferred to PhoP, which according to the classical model, acts as a typical transcriptional activator of its target genes. However, Will et al. (doi.org/10.1038/ncomms6270) proposed an alternate “counter-silencing” model, according to which genes in the PhoP regulon that were acquired by <em>Salmonella</em> via horizontal transfer are repressed by the generalized DNA-binding protein H-NS at high [Mg<sup>2+</sup>] and are induced at low [Mg<sup>2+</sup>] because the phosphorylated PhoP displaces the H-NS from the promoters and lifts repression. We evaluated this model by examining the transcriptional regulation of the <em>mgtCBRU-cigR </em>operon, which encodes the virulence protein MgtC and the Mg<sup>2+</sup> transport protein MgtB and is in the SPI-3 pathogenesis island that has been acquired by <em>Salmonella</em> via horizontal transfer. Our main finding was that in the non-pathogenic strain of <em>S</em>. Typhimurium (LT2), induction of the <em>mgtCBRU-cigR</em> operon by Mg<sup>2+</sup> limitation requires a functional PhoP protein, regardless of the presence or absence of H-NS. Interestingly, the pathogenic strain of <em>S</em>. Typhimurium (ATCC 14028s) revealed PhoP-independent transcription in the absence of H-NS, but only under inducing conditions. Thus, our results do not support the counter-silencing model and are consistent with the canonical view that PhoP is needed as a transcriptional activator of genes in the PhoP regulon.</p>
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The Cost of Respect : A qualitative study on the relationship between peace communities and governments in civil warsWilhelm, Carolyne January 2023 (has links)
Peace communities are an “organized and sustained civilian mobilization in the midst of civil war to declare neutrality and to purposely end or prevent violent conflict in their community” (Kaplan. 2017). Scholars have long believed peace community could scale up from local oriented peace to connect to national peace processes but have overlooked the relationship between peace communities and their government. This study asks Why do governments respect the rules and boundaries of some peace communities and not others? I hypothesize that governments are more likely to respect peace communities with higher levels of cohesion, and more likely to disrespect less cohesive peace communities. I conduct a structured focused comparison study to test three empirical cases from the Philippines, comparing three first generation peace zones. I found some support for my hypothesis and causal mechanism. I then tested another empirical case from Colombia and found additional support for my hypothesis but not for my causal mechanism. Overall, this study presents a new theoretical framework, introduces a new dependent variable for measuring peace communities, and provids insight into the often under-researched first generation Philippine peace zones.
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Enhanced Butanol Production by Free and Immobilized Clostridium sp. Cells Using Butyric Acid as Co-SubstrateGholizadeh, Laili January 2010 (has links)
Butanol production by four different Clostridium sp. strains was investigated using glucoseP2-medium supplemented with increasing concentrations of butyric acid, added as cosubstrate.Batch fermentations were carried out in serum bottles (freely-suspended cellcultures) and fibrous-bed bioreactor (FBB) with medium recirculation (immobilized cells).Butyric acid clearly revealed to inhibit cellular growth with all specific growth rates decliningupon the increase of butyrate concentrations. However, the presence of low and moderatelevels in the medium can readily enhance the ABE-fermentation and increase butanolproduction through a shift induction towards the solventogenic phase controlled by themedium pH. In all cases it was found that 4.0 g⋅l-1 is the optimal concentration of butyratethat maximizes the yields for all ABE-solvents and butanol productivities. The non-mutant C.acetobutylicum ATCC 824 was singled out as the most efficient butanol productive strainamong all bacteria tested (10.3 g⋅l-1 butanol versus 0.72 g⋅l-1 with and without 4.0 g⋅l-1butyrate, respectively) showing a productivity augment in the order of 0.078 g⋅l-1⋅h-1 (78.5%)and yields of 0.3 g⋅g-1 from substrate and 7.6 g⋅g-1 from biomass versus 0.072 g⋅g-1 and 0.41g⋅g-1 with and without the optimal butyrate concentration, respectively. This strain alsorevealed the best overall tolerance over increasing butyrate concentrations up to ∼6.0 g⋅l-1 andthe highest glucose uptake (65.5%) among all bacteria. Furthermore, the beneficial effects ofbutyric acid were also observed through the use of a fibrous bed-bioreactor when the mutatedstrains of C. beijerinckii ATCC 55025 and BA 101 were tested. The use of this immobilizedcell system effectively improved butanol production over the free system with butanol titersin the fermentation broth around 11.5 g⋅l-1 and 9.4 g⋅l-1 for the two bacteria, respectively,roughly doubling the values attained with the corresponding suspended cell cultures when themedia were supplemented with 4.0 g⋅l-1 of butyrate. All these results confirm theenhancement of butanol formation using either free or immobilized cell culturessupplemented with butyric acid concentrations up to 4.0 g⋅l-1 in the media.
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Kinetics of 2, 4, 6-Trinitrotoluene Reduction by Pseudomonas PutidaSheikh, Kharisha S. 13 October 2006 (has links)
No description available.
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