6 Abstract Temperate forests serve as long term carbon storage and are affected by increasing carbon dioxide (CO2) concentration in the atmosphere. Norway spruce (Picea abies (L.) Karst.) is the most abundant conifer in the forests of the Czech Republic, therefore I studied the response of its photosynthetic aparatus to elevated CO2 concentration. The aim of my thesis was to analyze the impact of CO2 concentration on chloroplast ultrastructure in both shaded and exposed needles, focusing on the volume density of starch in the median cross-sections of mesophyll cell chloroplasts. The next aim of the study was to test whether the chloroplasts of the first subepidermal layer of mesophyll are representative for the whole needle with respect to starch volume density. The study was performed on eleven years-old Norway spruce trees that had been exposed to ambient or elevated concentration of CO2 for six years; the experiment had been carried out at the Bílý Kříž experimental station in the Beskids Mountains in cultivation chambers with automatically adjustable windows. First year needles of trees grown under abient (382-395ppm) or elevated (700 ppm) CO2 concentration were collected in October 2011. The needles were used to prepare ultrathin sections and the images of median chloroplast cross-sections were...

Pinus mugo Turra (sensu lato) is a prostrate shrub growing above the alpine timberline in the mountain ranges of Southern, Central and Eastern Europe. It is well adapted to the harsh alpine environment creating different mechanisms for survival. The research was carried out in Krkonoše Mountains on base of Pinus mugo individuals compared with Picea abies trees. Samples from shrubs were gathered using serial sectioning from four sites in different elevations located on Sněžka Mountain and Smogornia Ridge. Further analysis of the sampled material was made with the help of different detrending methods to see which method will return the best growth response to climate parameters. RCS detrending and detrending via simple averaging reflected the best climate signal contained in dwarf pine chronologies. The advantage of these methods is based on their ability to reflect growth conditions of the particular site. Upper sites showed significant correlations with temperatures of the growing season, while on lower sites the signal was quite unclear. The amount of precipitation plays the significant role on shrub growth during the vegetation period (especially July month) and early spring when water is very important for growth initiation. Upper Pinus mugo sites showed high sensitivity to droughts, especially...

The observational study on natural regeneration of Norway spruce (Picea abies) was provided during seasons 2010 and 2011 in the windthrow area of High Tatra National Park. The main aim of this master thesis was to describe the distribution pattern in Norway spruce regeneration as well as to estimate the spatial scale, which most preciselly describes the differences in its phenotypic variability. Following step was to determine the relative influence of abiotic and stand factors on the growth characteristics and abundance of spruce seedlings. The Main focus lied on stressing the role of biotic interactions, like intraspecific and interspecific competition, leading to certain discrepancies in the phenotype, as well as in abundance of spruce seedlings.The reponse in variability in spruce traits was recognized at each spatial level. The results showed clear causality between soil moisture and vegetation composition, which both directly modified not only the phenotype of spruce seedlings and plants, but have even influenced their counts on particular stands.

The main objective of this thesis was to improve the understanding of some aspects on wood and fibre mechanics related to conditions in the thermomechanical pulping process. Another objective was to measure the power distribution between the rotating plates in a refiner.   The thesis comprises the following parts: –A literature review aimed at describing fracture in wood and fibres as related to the thermomechanical pulping process –An experimental study of fracture in wood under compression, at conditions similar to those in feeding of chips into preheaters and chip refiners –An experimental study of the effect of impact velocity on the fracture of wood, related to conditions of fibre separation in the breaker bar zone in a chip refiner –A micromechanical model of the deterioration of wood fibres, related to the development of fibre properties during the intense treatment in the small gap in the refining zone –Measurements of the power distribution in a refiner.   The fracture in wood under compression was investigated by use of acoustic emission monitoring. The wood was compressed in both lateral and longitudinal directions to predict preferred modes of deformation in order to achieve desired irreversible changes in the wood structure. It was concluded that the most efficient compression direction in this respect is longitudinal. Preferable temperature at which the compression should be carried out and specific energy input needed in order to achieve substantial changes in the wood structure were also given.   The fibre separation step and specifically the effect of impact velocity on the fracture energy were studied by use of a falling weight impact tester. The fracture surfaces were also examined under a microscope. An increase in impact velocity resulted in an increase in fracture energy. In the thermomechanical pulping process the fibres are subjected to lateral compression, tension and shear which causes the creation of microcracks in the fibre wall. This damage reduces the fibre wall stiffness. A simplified analytical model is presented for the prediction of the stiffness degradation due to the damage state in a wood fibre, loaded in uni-axial tension or shear. The model was based on an assumed displacement field together with the minimum total potential energy theorem. For the damage development an energy criterion was employed. The model was applied to calculate the relevant stiffness coefficients as a function of the damage state. The energy consumption in order to achieve a certain damage state in a softwood fibre by uniaxial tension or shear load was also calculated. The energy consumption was found to be dependent on the microfibril angle in the middle secondary wall, the loading case, the thicknesses of the fibre cell wall layers, and conditions such as moisture content and temperature. At conditions, prevailing at the entrance of the gap between the plates in a refiner and at relative high damage states, more energy was needed to create cracks at higher microfibril angles. The energy consumption was lower for earlywood compared to latewood fibres. For low microfibril angles, the energy consumption was lower for loading in shear compared to tension for both earlywood and latewood fibres. Material parameters, such as initial damage state and specific fracture energy, were determined by fitting of input parameters to experimental data. Only a part of the electrical energy demand in the thermomechanical pulping process is considered to be effective in fibre separation and developing fibre properties. Therefore it is important to improve the understanding of how this energy is distributed along the refining zone. Investigations have been carried out in a laboratory single-disc refiner. It was found that a new developed force sensor is an effective way of measuring the power distribution within the refining zone. The collected data show that the tangential force per area and consequently also the power per unit area increased with radial position. The results in this thesis improve the understanding of the influence of some process parameters in thermomechanical pulping related wood and fibre mechanics such as loading rate, loading direction, moisture content and temperature to separate the fibres from the wood and to achieve desired irreversible changes in the fibre structure. Further, the thesis gives an insight of the spatial energy distribution in a refiner during thermomechanical pulping.

Old-growth stands are important for management, conservation, wildlife, recreation, and maintaining biological diversity in forested landscapes. However, we are lacking the information needed to adequately identify and characterize old-growth stands. This is especially true for high elevation, interior forests. The characterization of stand structure and regeneration pattern will help in the development of site-specific guidelines for identifying old growth stands and restoring some of the old-growth characteristics in managed stands. This pamphlet presents a synopsis of a study investigating stand structure and regeneration of old-growth stands in the Moist Cold Engelmann Spruce - Subalpine Fir (ESSFmc) Subzone near Smithers, B.C. The three stands selected for the study were located on zonal sites, each in different watersheds, and the stands were established after fire. The criteria used for selection were: i) absence of lodgepole pine, ii) presence of advanced regeneration, and iii) abundant snags and coarse woody debris. These stands were presumed to represent the old-growth stage of stand development or the final (climax) stage of secondary succession.

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The aim of the study was to determine the influence of phenolics content and inoculation with soil extract on microbial respiration, on the phenoloxidase (PhOx), peroxidase (PerOx) and newly Mn-peroxidase (MnP) activity in two dominating litter samples (Calamagrostis villosa and Picea abies) differing in phenolics content from Plešné and Čertovo lake watersheds. At PhOx and PerOx activity, the dependence on incubation temperature with L-DOPA was estimated. PhOx and MnP activities significantly increased with higher content of hardly decomposable phenolics, but decreased with water extractable phenolics content. Inoculation with soil extract had no influence on microbial respiration, enzyme activity, nor on decomposition of phenolics. Microbial respiration was significantly higher at 10°C, but average enzyme activity was comparable at 0 and 10°C. PhOx activities had temperature optimum higher than 22°C, while PerOx activities had temperature optimum at 0 - 15°C.

Le changement climatique continue d'affecter la dynamique des paysages forestiers à grande échelle. Cependant, il demeure incertain comment ces changements affecteront les forêts futures et en particulier les épidémies des insectes ravageurs forestiers. Le changement climatique affecte l’émergence des insectes, en perturbant notamment la synchronisation phénologique entre les insectes herbivores et leurs arbres hôtes. De telles perturbations peuvent avoir des conséquences importantes sur le moment de l’émergence, l'étendue et la gravité de l'épidémie. Cette étude vise à comprendre comment le changement climatique pourrait affecter la synchronie phénologique entre la tordeuse des bourgeons de l'épinette (Choristoneura fumiferana), un défoliateur indigène, et ses espèces hôtes (Abies balsamea et Picea mariana) et comment cela pourrait affecter l'étendue des épidémies de la tordeuse des bourgeons de l'épinette dans la région de la Côte-Nord au Québec, Canada. Nous avons exploré les effets de deux facteurs expérimentaux sur l'étendue des épidémies à l'aide d'un modèle de simulation stochastique spatialement explicite à base d’agents (MBA): (1) la température quotidienne représentée selon deux niveaux d'augmentation (+2°C et +4°C) relative à une base de référence 2016 et (2) la variation de la phénologie des arbres hôtes correspondant aux différents niveaux d'incertitude (SD) concernant le moment du débourrement des bourgeons. Nous avons évalué comment ces facteurs ont affecté la variation de l'étendue des épidémies de la tordeuse des bourgeons de l'épinette et la complexité spatiale du patch épidémique sur un horizon de simulation de 20 ans. Nos résultats de simulation indiquent que la synchronisation phénologique arbres hôtes-insectes est fortement affectée par les changements de température, mais de manière non linéaire. Une augmentation de 2°C a permis de réduire l'étendue de l'épidémie en raison de la faible survie des larves, tandis qu'une augmentation de 4°C a entraîné une survie plus élevée des insectes et des épidémies plus importantes. Notre modèle peut aider à prévoir la dynamique future des forêts et faciliter l'élaboration de meilleures stratégies de gestion pour réduire l'effet des épidémies sur les paysages forestiers. / Climate change continues to affect forest landscape dynamics at a global scale. However, it remains uncertain how these changes will affect future forests and in particular outbreaks of forest insect pests. Climate change can affect outbreaking insects by disrupting phenological synchrony between herbivorous insects and their host trees. Such disruptions can have important consequences for outbreak timing, extent, and severity. This study aims to understand how climate change could affect the phenological synchrony between the spruce budworm (Choristoneura fumiferana), a native outbreaking defoliator, and its host trees (Abies balsamea and Picea mariana), and how this might affect the extent of spruce budworm outbreaks in the Côte-Nord region in Quebec, Canada. We explored the effects of two experimental factors on outbreak extent using a spatially explicit stochastic agent-based simulation model (ABM): (1) daily temperature represented as two levels of increase (+2°C and +4 °C) relative to a 2016 baseline, and (2) variation in host phenology represented as four different levels of uncertainty (SD) around the timing of budburst. We assessed how these factors affected variation in spruce budworm outbreak extent and outbreak patch spatial complexity over a 20-year simulation horizon. Our simulation results indicate that host trees-insect phenological synchrony is strongly affected by temperature changes, but in a non-linear way. An increase of 2°C was found to reduce outbreak extent due to poor larval survival, while an increase of 4°C resulted in higher insect survival and larger outbreaks. Our model can help to forecast future forest dynamics and facilitate the development of better management strategies to reduce the effect of outbreaks on forest landscapes.

Notre équipe a identifié le thé Labrador [Rhododendron groenlandicum L. (Ericaceae)] comme une plante potentiellement antidiabétique de la pharmacopée traditionnelle des Cris de la Baie James orientale. Dans la présente étude, nous avons évalué les effets néphroprotecteurs potentiels de la plante. De la microalbuminurie et de la fibrose rénale ont été développées chez des souris alimentées avec une diète grasse (DG). Le R. groenlandicum améliore d’une façon non-significative la microalbuminurie, avec des valeurs de l’aire sous la courbe (ACR) diminuant de 0.69 à 0.53. La valeur de la fibrose rénale qui était, à l’origine, de 4.85 unités arbitraires (UA) dans des souris alimentées à la DG, a chuté à 3.27 UA après avoir reçu un traitement de R. groenlandicum. Le R. groenlandicum a réduit la stéatose rénale de presque la moitié alors que l’expression du facteur de modification Bcl-2 (Bmf) a chuté de 13.96 UA à 9.43 UA. Dans leur ensemble les résultats suggèrent que le traitement avec R. groenlandicum peut améliorer la fonction rénale altérée par DG. Dans l’étude subséquente, notre équipe a identifié 17 espèces de la forêt boréale, de la pharmacopée traditionnelle des Cris de la Baie James orientale, qui ont présenté des activités biologiques prometteuses in vitro et in vivo dans le contexte du DT2. Nous avons maintenant examiné ces 17 extraits afin d’identifier lesquels possèdent un potentiel cytoprotecteur rénale en utilisant des cellules Madin Darby Canine Kidney (MDCK) mises à l’épreuve dans un médium hypertonique. Nous concluons que plusieurs plantes antidiabétiques Cris exercent une activité de protection rénale qui pourrait être pertinente dans le contexte de la néphropathie diabétique (ND) qui affecte une proportion importante des Cris. La G. hispidula et la A. balsamea sont parmi les plantes les plus puissantes dans ce contexte et elles semblent protectrices principalement en inhibant la caspase 9 dans la voie de signalisation apoptotique mitochondriale. Finalement, nous avons utilisé une approche de fractionnement guidée par un test biologique pour identifier les fractions actives et les composés de A. balsamea avec un potentiel de protection rénale in vitro dans des cellules MDCK mises au défi avec un médium hypertonique. La fraction d’hexane (Hex) possède le potentiel le plus élevé parmi toutes les fractions de solvant contre les dommages cellulaires induits par le stress hypertonique. Dans des études précédentes, trois composés purs ont été identifiés à partir de la fraction Hex, à savoir, l’acide abiétique, l’acide déhydroabiétique et le squalène. L’acide abiétique se distinguait par son effet puissant dans le maintien de la viabilité des cellules MDCK (AnnV-/PI-) à un niveau relativement élevé (augmentation de 25.48% relative au stress hypertonique, P<0.0001), ainsi qu’une réduction significative (diminution de 20.20% par rapport au stress hypertonique, P<0.0001) de l’apoptose de stade précoce (AnnV+/PI-). L’acide abiétique peut donc servir à normaliser les préparations traditionnelles d’A. balsamea et à trouver des applications potentielles dans le traitement de la néphropathie diabétique. Les trois études ont été intrinsèquement liées les unes aux autres, par conséquent, nous avons réussi à identifier R. groenlandicum ainsi que A. balsamea comme nouvelles plantes prometteuses contre la néphropathie diabétique. Nous croyons que ces résultats profiteront à la communauté crie pour la gestion des complications diabétiques, en particulier la néphropathie diabétique. En parallèle, nos données pourraient faire avancer l'essai clinique de certaines plantes médicinales de la pharmacopée traditionnelle des Cris de la Baie James orientale du Canada. / Our team has identified Labrador tea [Rhododendron groenlandicum L. (Ericaceae)] as a potential antidiabetic plant from the traditional pharmacopeia of the Eastern James Bay Cree. In the present study, we assessed the plant’s potential renoprotective effects. Microalbuminuria and renal fibrosis was developed in high fat diet (HFD)-fed mice. Meanwhile, there was a tendency for R. groenlandicum to improve microalbuminuria, with the values of area under the curve (ACR) reducing from 0.69 to 0.53. Renal fibrosis value was originally 4.85 arbitrary units (AU) in HFD-fed mice, dropped to 3.27 AU after receiving R. groenlandicum treatment. R. groenlandicum reduced renal steatosis by nearly one half whereas the expression of Bcl-2-modifying factor (Bmf) diminished from 13.96 AU to 9.43 AU. Taken altogether, the results suggest that R. groenlandicum treatment can improve renal function impaired by HFD. In the following study, our team has identified 17 Boreal forest species from the traditional pharmacopeia of the Eastern James Bay Cree that presented promising in vitro and in vivo biological activities in the context of type 2 diabetes (T2D). We now screened the 17 plants extracts for potential renal protective activity using Madin Darby Canine Kidney (MDCK) cells challenged with hypertonic medium. Cytoprotective potential as well as underlying mechanisms were investigated. We conclude that several Cree antidiabetic plants exert renal protective activity that may be relevant in the context of diabetic nephropathy that affects a significant proportion of Cree diabetics. G. hispidula and A. balsamea are amongst the most powerful plants in this context and they appear to exert their modulatory effect primarily by inhibiting caspase 9 in the mitochondrial apoptotic signaling pathway. We used a bioassay-guided fractionation approach to identify active fractions and compounds of A. balsamea with renal protective potential in vitro in MDCK cells challenged with hypertonic medium. The hexane (Hex) fraction possessed the highest potential among all solvent fractions against cell damage induced by hypertonic stress. In previous studies, three pure compounds were identified from the Hex fraction, namely, abietic acid, dehydroabietic acid and squalene. Abietic acid stood out by its strongest effect in maintaining MDCK cell viability (AnnV-/PI-) at a relatively high level (25.48% increase relative to hypertonic stress, P<0.0001) as well as a significant reduction (20.20% decrease relative to hypertonic stress, P<0.0001) of early stage apoptosis (AnnV+/PI-). Abietic acid may thus serve to standardize A. balsamea traditional preparations and find potential applications in the treatment of diabetic nephropathy. The three studies were inherently associated with each other, as a result we had successfully identified R. groenlandicum as well as A. balsamea as novel medicinal plants against diabetic nephropathy. We believe such findings will benefit the Cree community for the management of diabetic related complications, especially diabetic nephropathy. Meanwhile, our data might advance the clinical trial of certain medicinal plants from the traditional pharmacopeia of the Canadian Eastern James Bay Cree.

The effect of elevated CO2 concentration (EC CO2) on photosynthesis has been observed on many hierarchical levels. There was a significant increase in the rate of photosynthesis of examined trees observed in previous studies thus I hypothesised these changes are accompanied by changes of chloroplast ultrastructure and photosystem content and function and the main aim of this study is to evaluate these adjustments. In this study 13 - 14 years old seedlings of Norway spruce (Picea abies L. Karst.) grown in glass domes with adjustable windows - one with ambient CO2 concentration as a control, the other one with simulated EC CO2 (700 ppm) - during the vegetative season were examined. Pigment content, fluorescence and reflectance indexes, activity of photosystem 1 (PS1) and 2 (PS 2) of isolated chloroplasts, size of cross-sectional area of chloroplast and proportion of stromal to granal thylakoids under EC CO2 treatment were investigated. Although there was a significant increase in the maximum rate of photosynthetic assimilation of trees from EC CO2 (observed by other researchers of our team), decreased chlorophyll and carotenoid content as well as the activity of both photosystems were observed, which is usually atributed to photosynthetic acclimation. As the rate of decrease of photosystem 1 and photosystem 2...