<p>In this project a web-based system called 3DPOPS have been designed, developed and implemented. The system creates initial 3D structures of oligosaccharides according to user input data and is intended to be integrated with an automatized 3D prediction system for saccharides. The web interface uses a novel approach with a dynamically updated graphical representation of the input carbohydrate. The interface is embedded in a web page as a Java applet. Both expert and novice users needs are met by informative messages, a familiar concept and a dynamically updated graphical user interface in which only valid input can be created.</p><p>A set of test sequences was collected from the CarbBank database. An initial structure to each sequence could be created. All contained the information necessary to serve as starting points in a conformation search carried out by a 3D prediction system for carbohydrates.</p>

The aim of my diploma project is to create a program that will serve as a support for the teaching. Project is divided into two parts - theoretical and practical. In the theoretical part I will discuss the theory necessary for development of this work. The practical part will describe functionality of created applets.

The aim of my diploma project is to create a program that will serve as a support for the teaching. Project is divided into two parts - theoretical and practical. In the theoretical part I will discuss the theory necessary for development of this work. The practical part will describe functionality of created applets.

For many years it has only been HTML, CSS, and JavaScript that have been native to the Web. In December 2019, WebAssembly joined them as the fourth language to run natively on the Web. This thesis compared WebAssembly to the technologies ActiveX, Java applets, Asm.js, and Portable Native Client (PNaCl) in terms of their performance, security, and browser support. The reason why this was an interesting topic to investigate was to determine in what areas WebAssembly is an improvement over previous similar technologies. Another goal was to provide companies that still use older technologies with an indication as to whether or not it is worth upgrading their system with newer technology. To answer the problem, the thesis mainly focused on comparing the performance of the technologies through a controlled experiment. The thesis also aimed at getting a glimpse of the security differences between the technologies by the use of a literature study. The thesis showed that PNaCl was the technology with the best performance. However, WebAssembly had better browser support. Also, PNaCl is deprecated while WebAssembly is heavily supported and could potentially be further optimized.

Making a communication tool easier for people to operate can have profound and positive effects on its popularity and on the users themselves. This thesis is about making it easier for people to publish web-based documents that have sound, video and text. Readily available software and hardware are employed in an attempt to achieve the goal of providing a software service that enables users to compose audio-video documents with text.

The aim of this study is to develop an easily accessible and realistic magnetic resonance imaging (MRI) simulation tool for educational and research purposes. With this aim, NMR (nuclear magnetic resonance imaging) phenomenon is simulated based on the physical principles, starting from the motion of a spin under the influence of external magnetic fields to pulse sequences generating the image. The inputs of the simulation are a 3D virtual object and a pulse sequence definition. The simulation software generates slice images using Fourier reconstruction method. To perform a more realistic simulation, the Bloch equation, which explains the behavior of a spin under external magnetic fields, is solved by using numerical methods. This enables to observe the behavior of a spin system under any magnetic field influence, not only for resonance condition. The simulation successfully simulates T2* affect by using inhomogeneous static magnetic field distribution over the entire volume of the object. The software is implemented in Java language and developed as a Java applet. A support tool is developed which allows observing NMR phenomenon. The simulation can produce realistic images, generate many of the artifacts in MRI, like intra-voxel dephasing, chemical shift, cross-talk (since it simulates the whole process), and has the advantage of being web-based compared to the existing stand-alone MRI simulations.

In the past decade, the technologies of computer communication and PC hardware/software evolve in a very fast pace. Many conventional industries are refurbished with these new tools. Hence the operation of the industry can be improved, and even the products, equipped with new technology, demonstrate a new dimension of their function. Among all these new ideas or tools, we would like to study the feasibility of integrating WWW server, Java JNI, Real-time Linux and PC-based hardware components together to form an internet-based manufactory service server. In this work, we use Linux Redhat OS as the platform, and its Apache homepage server to provide users to access the services, such as activating a relay or retrieving the status of a limit switch. Enhanced with Java JNI, the WWW server can access the control of PC's hardware. More importantly, patching the OS with real-time packages, the WWW server is transformed into real-time controller which is much cheaper and much reliable than its opponents, such as Microsoft NT. RS 232 serial ports, an 8255 multi-function I/O card, optical encoder card, D/A card and a servo motor are integrated under the command of the WWW server. By browsing the control center's homepage, users can easily acquire the status of the peripherals, or send out control command remotely. Experiment results confirm the performance of the system. The structure of this experimental server can be modified to fit the requirement of a remotely operated or tele-monitoring system by rewriting the homepage.

In this project a web-based system called 3DPOPS have been designed, developed and implemented. The system creates initial 3D structures of oligosaccharides according to user input data and is intended to be integrated with an automatized 3D prediction system for saccharides. The web interface uses a novel approach with a dynamically updated graphical representation of the input carbohydrate. The interface is embedded in a web page as a Java applet. Both expert and novice users needs are met by informative messages, a familiar concept and a dynamically updated graphical user interface in which only valid input can be created. A set of test sequences was collected from the CarbBank database. An initial structure to each sequence could be created. All contained the information necessary to serve as starting points in a conformation search carried out by a 3D prediction system for carbohydrates.

VST (Virtual Studio Technology) is one of the most used for real-time audio processing. VST effects are inserted to host applications in the form of plug-ins. This thesis discusses a design of a VST host remote control using a Java applet displayed in a web browser. A graphical user interface of the applet consists of graphical controllers created in this thesis. The number of controlled parameters is passed on to the applet by server using an XML configuration file. Three types of controllers are available: a slider, a knob and a button. If a parameter value change occurs, the applet sends a message with the parameter values to the server. Subsequently, the server reacts to this change by setting the parameters of the loaded VST module. The proposed design was completely realized and practically tested.

Master's thesis analyses modern hash functions. The requirements for these features and briefly outlined some of the types of attacks are given in the first part. The second part focuses on the specication Skein hash function, which is among the candidates for the new SHA-3 standard, and a description of the JCOP platform, which is a function implemented. In the last part of the work there are discussed implementation problematic parts and evaluation of the selected solution.