Stimulation of CD40 on APCs through CD40L expressed on helper CD4+ T cells activates and “licenses” the APCs to prime CD8+ T cell responses. While other stimuli, such as TLR agonists, can also activate APCs, it is unclear to what extent they can replace the signals provided by CD40-CD40L interactions. In this study, we used an adoptive transfer system to re-examine the role of CD40 in the priming of naïve CD8+ T cells. We find an approximately 50% reduction in expansion and cytokine production of TCR-transgenic T cells in the absence of CD40 on all APCs, and on dendritic cells in particular. Moreover, CD40-deficient and CD40L-deficient mice fail to develop endogenous CTL responses after immunization and are not protected from a tumor challenge. Surprisingly, the role for CD40 and CD40L are observed even in the absence of CD4+ T cells; in this situation, the CD8+T cell itself provides CD40L. Furthermore, we show that although TLR stimulation improves T cell responses, it cannot fully substitute for CD40. We also investigated whether CD40-CD40L interactions are involved in the generation, maintenance, and function of memory CD8+ T cells. Using a virus infection system as well as a dendritic cell immunization system, we show that the presence of CD40 on DCs and other host APCs influences the survival of activated effector cells and directly affects the number of memory CD8+ T cells that are formed. In addition, memory CD8+ T cell persistence is slightly impaired in the absence of CD40. However, CD40 is not required for reactivation of memory CD8+ T cells. It seems that CD40 signals during priming also contribute to memory CD8+ T cell programming but this function can be independent of CD4+T cells, similar to what we showed for primary responses. Altogether, these results reveal a direct and unique role for CD40L on CD8+ T cells interacting with CD40 on APCs that affects the magnitude and quality of primary as well as memory CD8+ T cell responses.

No description available.

It is shown here that the ability of B lymphocytes to act as supportive host cells for virus infections requires they be activated from the resting Gostage of the cell cycle. I have used a series of activation regimens, which allow B cells to progress to different stages in their activation/differentiation pathway toward antibody secretion, in order to evaluate the extent of activation required to support vesicular stomatitis or Newcastle disease virus infections. At least three distinct phases during B cell activation which affected VSV infection were defined. Freshly isolated resting murine splenic B cells in the Go phase of the cell cycle do not support VSV, assessed by protein synthesis, infectious center formation, and PFU production. Small B cells cultured for 48 hours without stimulation still do not support VSV. B cells stimulated with the lymphokines found in Con A activated supernatants from splenic T cells or cloned T cell lines transited into the G1 phase of the cell cycle but remain refractory to VSV. These VSV non-supportive B cell populations do take up virus particles and transcribe viral mRNAs which can be translated in vitro, suggesting a translational block to VSV. B cells stimulated into the S phase of the cell cycle with anti-immunoglobulin synthesize VSV proteins and increased numbers of infectious centers, but only low level PFU synthesis (center) is observed. Co-stimulation with anti-Ig and lymphokines, which supports differentiation to antibody secretion, enhanced PFU synthesis without further increasing the number of infected B cells. LPS, which activates B cells directly to antibody secretion by a pathway different from anti-Ig, induced infectious centers, and PFUs at levels comparable to those seen when stably transformed permissive cell lines are infected. Co-stimulation of LPS activated B cells with the same lymphokine populations that enhance PFU production when anti-Ig is used as a stimulator suppresses PFU production completely, suggesting that anti-Ig and LPS activated B cells are differentially responsive to lymphokines. NDV infection of murine B cells differed markedly from VSV infection, as all B cell populations examined gave a similar response pattern. NDV viral proteins were synthesized by B cells in each of the activation states previously described, even freshly isolated B cells. Infectious center formation increased up to 5-fold over the levels observed with unstimulated B cells after anti-Ig or LPS activation. However, PFU synthesis was low (center) for all B cell populations. These results suggest that these two similar viruses may be dependent on different host cell factors and that these factors are induced for VSV but not NDV by the B cell activators employed here or that the process of infection of B cell by these two viruses induces different cellular responses.

L’ingénierie tissulaire osseuse a pour objectif de repousser les limitesexistantes de la régénération osseuse. Les stratégies proposées consistent àassocier à une matrice tridimensionnelle (3D) des cellules autologues, capables derégénérer en 3D un tissu fonctionnel. Le but de ce travail a été d’étudier l’importancede la communication cellulaire entre les cellules du compartiment stromal et lescellules endothéliales au sein d’une matrice tridimensionnelle poreuse constituée depolysaccharides naturels biodégradables. Nos résultats montrent que l’architecture etla nature de cette matrice permettent de guider la différenciation ostéoblastique descellules humaines mésenchymateuses issues de la moelle osseuse. L’organisationcellulaire en agrégats observée stimule les interactions cellulaires, et plusparticulièrement la formation de jonctions communicantes de type GAP et l’activitédes Connexines 43. Nous avons en également étudié la fonction des Pannexines 1et 3 dans la culture 3D. En conclusion, l’ensemble de nos travaux démontre que lesinteractions cellule-cellule constituent des événements majeurs dans cesmécanismes de régénération tissulaire. Les données cellulaires et expérimentalestémoignent de l’intérêt d’utiliser la totalité de la suspension de moelle osseuse pourfavoriser à la fois l’ostéoformation et la vascularisation du tissu. / Bone tissue engineering aims to resolve the existing limitations of boneregeneration methods. One of the proposed strategies consists on the association,within a three-dimensional (3D) matrix, with autologous cells able to regenerate afunctional 3D tissue. The purpose of this study was therefore to investigate theimpact of cellular communication, between cells of the stromal compartment andendothelial cells, within the three-dimensional porous matrix made of biodegradablenatural polysaccharides, focusing on bone repair. Our results show that thearchitecture and the nature of the 3D macroporous matrix promotes the guidance ofmesenchymal stems cells, derived from human bone marrow, towards theosteoblastic lineage. Also, that the organization in aggregates, promoted by the 3Dmatrices, stimulated cell communication, evidenced by the formation of GAPjunctions and activity of Connexins 43. We also focused on the function ofPannexines 1 and 3 for the 3D culture in these matrices of polysaccharides. Inconclusion, this work shows that cell-cell interactions play a major role in order toimprove bone tissue regeneration. Also, cellular and experimental data demonstratesthe advantage of using a total fraction of bone marrow cells to promote both boneformation and vascularization.

In order to maintain a multicellular organism cells need to interact and communicate with each other. Signalling cascades such as the Bone Morphogenic Protein (BMP) and Hedgehog (Hh) signalling pathways therefore play essential roles in development and disease. Intercellular signalling also underlies the function of stem cell niches, signalling microenvironments that regulate behaviour of associated stem cells. Range and intensity of the niche signal controls stem cell proliferation and differentation and must therefore be strictly regulated. The testis and ovary of the fruit fly Drosophila melanogaster are established models of stem cell niche biology. In the apical tip of the testis, germ line stem cell (GSCs) and somatic cyst stem cells (CySCs) are arranged around a group of postmitotic somatic cells termed hub. While it is clear which signals regulate GSC maintenance it is unclear how these signals are spatially regulated. Here I show that BMP signalling is specifically activated at the interface of niche and stem cells. This local activation is possible because the transport of signalling and adhesion molecules is coupled and directed towards contact sites between niche and stem cells. I further show that the generation of the BMP signal in the wing disc follows the same mechanism. Hh signalling controls somatic stem cell populations in the Drosophila ovary and the mammalian testis. However, it was unknown what role Hh might play in the fly testis, where the components of this signalling cascade are also expressed. Here I show that overactivation of Hh signalling leads to an increased proliferation and an expansion of the cyst stem cell compartment. Finally, while the major components of the Hh signalling pathway are known, detailed knowledge of how signal transduction is implemented at the cell biological level is still lacking. Here, I show that localisation of the key signal transducer Smo to the plasma membrane is sufficient for phosphorylation of its cytoplasmic tail and downstream pathway activation. Using advanced, microscopy based biophysical methods I further demonstrate that Smo clustering is, in contrast to the textbook model, independent of phosphorylation.:Summary 1 List of publications 3 1 Introduction 9 Aims of the thesis 15 2 Generation of a local BMP signal in testis and wing disc 17 2.1 Introduction . . . . . . . . . . . . . . . . . . . . . . . . . . . . 19 2.1.1 Stem cells and stem cell niches . . . . . . . . . . . . . . 19 2.1.2 The Drosophila testis stem cell niche . . . . . . . . . . 20 2.1.3 BMP signalling in the fly . . . . . . . . . . . . . . . . . 23 2.2 Results . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 25 2.2.1 The BMP niche signal is transduced locally at adherens junctions 25 2.2.2 Generation of the local BMP niche signal . . . . . . . . 30 2.2.3 Exocyst involvement in long-range BMP signalling . . 34 2.3 Discussion . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 37 3 Hedgehog pathway overactivation in the testicular niche 41 3.1 Introduction . . . . . . . . . . . . . . . . . . . . . . . . . . . . 43 3.1.1 The role of Hedgehog in the fly . . . . . . . . . . . . . 43 3.2 Results . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 45 3.2.1 Overexpression of Hh increases the CySC number and expands their range 45 3.3 Discussion . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 47 4 Visualization of Smo phosphorylation and biophysical detection of Smo clustering 49 4.1 Introduction (part I) . . . . . . . . . . . . . . . . . . . . . . . 51 4.1.1 Hedgehog signalling in the fly . . . . . . . . . . . . . . 51 4.1.2 Reception and transduction of the Hh signal by Ptc and Smo 54 4.2 Results (part I) . . . . . . . . . . . . . . . . . . . . . . . . . . 56 4.2.1 A fluorescent reporter for Drosophila Smo tail phosphorylation 56 4.2.2 Smo phosphorylation and localisation in the salivary gland 61 4.2.3 Smo localisation in cultured insect cells . . . . . . . . . 63 4.2.4 Smo membrane localisation and phosphorylation . . . . 65 4.3 Introduction (part II) . . . . . . . . . . . . . . . . . . . . . . . 67 4.3.1 Fluorescence correlation spectroscopy (FCS) . . . . . . 67 4.3.2 Dual-color fluorescence cross-correlation spectroscopy (FCCS) 72 4.3.3 Artefacts in FCS/FCCS . . . . . . . . . . . . . . . . . 73 4.4 Results (part II) . . . . . . . . . . . . . . . . . . . . . . . . . . 79 4.4.1 Smo clustering measured by FCCS . . . . . . . . . . . 79 4.5 Discussion . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 82

<p>In recent years, science has shifted from a focus on reductionist explanations of biological phenomena to a more integrated, systems approach. This shift has made its way into curricular recommendations for undergraduate education. To understand complex biological phenomena, it has been argued that students employ mechanistic reasoning, in which one describes a mechanism by identifying the activities that produce change, the entities which engage in activities, and the starting and ending conditions. Students’ use of mechanistic reasoning requires engaging in the complex task of simultaneously integrating and coordinating multiple elements across space and time. In addition, students must link and organize their scientific ideas and then structure their thoughts into a network of knowledge, as described by the theory of knowledge integration. Previous studies that have explored students’ understanding of scientific concepts using knowledge integration as a lens found that students’ nonmechanistic ideas prevented them from identifying gaps in the connections between their ideas and from forming normative knowledge. Thus, this dissertation investigates the features of undergraduate biology students’ systems thinking using knowledge integration and mechanistic reasoning as conceptual and analytical frameworks. Using a semi-structured interview, we asked students to describe functional definitions of and relationships between three fundamental modules in biology (i.e., gene regulation, cell-cell communication, and the relationship between genotype and phenotype). In the first study, we found that the majority of students did not have normative functional definitions for how and why gene regulation occurs or how phenotype is regulated. When describing the relationships in an open context, most students expressed unidirectional, linear knowledge networks which lacked Mechanistic connections. In our second study, we examined how students described a transition point in biofilm development after being cued to think about the three modules. Though students struggled to transfer over relevant ideas to the biofilm context (such as gene regulation and cell-cell communication processes), we found that explanations were more specified in the nature of connections and content including more Mechanistic descriptions. In the third study, we explored features of biology students’ and instructors’ knowledge networks in an open context and situated to a context of the participants’ choice. Within an open context, most students described multidirectional, non-linear knowledge networks similar to instructors. In the specific context, the majority of students described non-linear knowledge networks, but some students modified their structures to be linear. Although the structures became less complex in the specific context, the nature of connections and content became more specified. Across all studies, we found that context greatly affected students’ systems thinking as revealed by the changing features of the knowledge networks. Specifically, context helped students identify what relationships they deeply understood and could transfer and allowed for the creation of a detailed explanation relevant to the specific biological phenomenon. For students to develop a broad systems perspective of biology, we recommend instructors engage students in the process of knowledge integration. Embed opportunities for students to think about biology concepts in various contexts, particularly where students grapple with nuanced and complex transfer of ideas. These practices will encourage students to form causal, mechanistic linkages between concepts and build an integrated, expert-like understanding of biology.</p>

La coordination du développement par les communications intercellulaires est essentielle pour assurer la reproduction chez les plantes. Plusieurs études démontrent qu’une communication entre le sac embryonnaire et le tissu maternel, le sporophyte, est essentielle au bon développement des gamètes. Les molécules, peptides ou autres protagonistes impliqués dans ces voies de signalisation ainsi que leur mode d’action restent toutefois nébuleux. Les gènes de type RALF codent pour des petits peptides sécrétés retrouvés de manière spécifique ou ubiquitaire dans la plante. Leur structure en font de parfaits candidats pour permettre ces communications cellule-cellule entre les différents tissus. Treize gènes de type RALF ont été isolés actuellement chez la pomme de terre sauvage Solanum chacoense. Maintenant, nous montrons qu’un de ceux-ci, ScRALF3, est impliqué dans la polarisation du sac embryonnaire et dans la synchronicité des divisions mitotiques assurant la formation d’un gamétophyte femelle mature fonctionnel. Étant exprimé de manière spécifique au niveau des téguments de l’ovule, ScRALF3 est un candidat idéal pour réguler les communications cellule-cellule entre le sporophyte et le sac embryonnaire. / Development coordination through intercellular communication is essential for plant reproduction. Several studies show that communication between embryo sac and maternal tissue, the sporophyte, is essential to the development of gametes. These molecules, peptides or other actors involved in these signaling pathways and their mode of action remains unclear. Genes encoding small secreted RALF peptides specifically or ubiquitously expressed throughout the plant are good candidates to allow these cell-cell communications. Thirteen RALF-like genes have been isolated at present from the wild potato Solanum chacoense. Now, we show that one of these, ScRALF3, is involved in the polarization of the embryo sac and the synchronicity of mitotic divisions to ensure the formation of a functional mature female gametophyte. Since it is specifically expressed in the integument of the ovule, ScRALF3 is an ideal candidate to regulate cell-cell communication between the sporophyte and the gametophyte, e.g., the embryo sac.

Dissertation (Ph.D.)--University of South Florida, 2008. / Includes vita. Includes bibliographical references (leaves 102-128).

La coordination du développement par les communications intercellulaires est essentielle pour assurer la reproduction chez les plantes. Plusieurs études démontrent qu’une communication entre le sac embryonnaire et le tissu maternel, le sporophyte, est essentielle au bon développement des gamètes. Les molécules, peptides ou autres protagonistes impliqués dans ces voies de signalisation ainsi que leur mode d’action restent toutefois nébuleux. Les gènes de type RALF codent pour des petits peptides sécrétés retrouvés de manière spécifique ou ubiquitaire dans la plante. Leur structure en font de parfaits candidats pour permettre ces communications cellule-cellule entre les différents tissus. Treize gènes de type RALF ont été isolés actuellement chez la pomme de terre sauvage Solanum chacoense. Maintenant, nous montrons qu’un de ceux-ci, ScRALF3, est impliqué dans la polarisation du sac embryonnaire et dans la synchronicité des divisions mitotiques assurant la formation d’un gamétophyte femelle mature fonctionnel. Étant exprimé de manière spécifique au niveau des téguments de l’ovule, ScRALF3 est un candidat idéal pour réguler les communications cellule-cellule entre le sporophyte et le sac embryonnaire. / Development coordination through intercellular communication is essential for plant reproduction. Several studies show that communication between embryo sac and maternal tissue, the sporophyte, is essential to the development of gametes. These molecules, peptides or other actors involved in these signaling pathways and their mode of action remains unclear. Genes encoding small secreted RALF peptides specifically or ubiquitously expressed throughout the plant are good candidates to allow these cell-cell communications. Thirteen RALF-like genes have been isolated at present from the wild potato Solanum chacoense. Now, we show that one of these, ScRALF3, is involved in the polarization of the embryo sac and the synchronicity of mitotic divisions to ensure the formation of a functional mature female gametophyte. Since it is specifically expressed in the integument of the ovule, ScRALF3 is an ideal candidate to regulate cell-cell communication between the sporophyte and the gametophyte, e.g., the embryo sac.

Dissertation (Ph.D.)--University of South Florida, 2008. / Title from PDF of title page. Document formatted into pages; contains 132 pages. Includes vita. Includes bibliographical references.