the project was based on genetic modification of cell's chromosome using žef Stefan's Institute, Ljubljana,

IN ENGLISH LANGUAGE Charles University, Faculty of Pharmacy in Hradec Králové, Department of Pharmacology and Toxicology Candidate: Mgr. Alžbeta Štefela Supervisor: Prof. PharmDr. Petr Pávek, PhD. Title of the doctoral thesis: Novel bile acid derivatives as promising therapeutic approach Bile acids (BAs) are amphipathic steroidal molecules that are traditionally known to facilitate intestinal digestion and absorption of lipids and fat-soluble substances. On top, the recent findings have revealed that they represent important signaling agents involved in the orchestration of lipid, glucose and energy metabolism and immune response. BAs exhibit these roles by activating intracellular nuclear receptors such as farnesoid X (FXR), pregnane X (PXR) vitamin D receptors. Furthermore, BAs act as endocrine signaling molecules and activate numerous biological cascades via a membrane G-protein-coupled receptor, termed TGR5. Therefore, the extensive modulation of BA scaffold underwent to identify compounds with specific targeting of above-mentioned receptors as a promising therapeutic approach for the treatment of various liver and metabolic disorders including cholestasis, biliary cirrhosis, nonalcoholic steatohepatitis or diabetes. The principal aim of this doctoral thesis was to investigate the structure...

Charles University, Faculty of Pharmacy in Hradec Králové Department of Pharmacology and Toxicology Candidate Mgr. Jan Dušek Supervisor Prof. PharmDr. Petr Pávek, Ph.D. Title of Doctoral Thesis Development of novel Constitutive androstane receptor (CAR) ligands Constitutive androstane receptor is nowadays known as the established nuclear receptor that regulates the expression of several key cytochrome P450 enzymes, predominantly CYP3A4 and CYP2B6. Recently it has been shown that CAR has also essential role in the regulation of endogenous metabolism of glucose, lipids, cholesterole or bile acids. Simultaneously, this receptor is considered to have proliferative effect on human hepatocytes and protective effects against toxic and dietary damage of liver parenchyme. Given the possible therapeutic utilization of CAR, its therapeutic options are being intensively studied. Unfortunately, currently known ligands of human or mouse CAR are either poorly selective or indirect. The aim of my doctoral thesis was to find new ligands of mouse and human CAR, that would enable more detailed study of the receptor.

Iron is an essential trace element for almost all living organisms. Iron overload in cells and tissues, however, leads to their disruption. Most oftenly damaged are parenchymatic organs such as the liver, pancreas and heart. The aim of this thesis was to create cellular in vitro models for the investigation of effects of excess iron on hepatocytes and pancreatic beta cells and on these models to investigate cellular processes which lead to cellular damage during iron overload. We focused on examining the presence of oxidative and endoplasmic reticulum stress and the activation of apoptotic cell death. For our experiments, we used HEP-G2 cell line which represents human hepatocytes and NES2Y cell line which represents human pancreatic beta cells. To study the mechanisms of cellular damage during iron overload, we used two approaches by which we observed both acute and long-term effects of high levels of iron on damage of the tested cell lines. When studying the acute effect of excess iron on the cells, we applied high doses of iron (using 15 mM ferric citrate in medium) that led to the activation of cell death in hours. Long-term effects of iron overload were tested on cells regularly cultivated in the presence of 50 μM and 100 μM ferric citrate over a period of several months. Iron concentrations...

O melanoma maligno é o tipo de câncer de pele com pior prognóstico, devido à sua elevada probabilidade de causar metástases. Atualmente existem poucos tratamentos efetivos para o tratamento do melanoma, sendo que a sobrevida de pacientes que apresentam metástases é muito baixa, em torno de 8 meses, sendo que as taxas de cura nestas condições não ultrapassam 1%. A terapia fotodinâmica (TFD) é uma modalidade terapêutica seletiva e não invasiva, que vem demonstrando excelentes resultados clínicos no tratamento de tumores de pele do tipo não melanoma, como carcinoma espino e basocelular. O trabalho em questão aborda a efetividade da TFD, em linhagens humana de melanoma em diferentes fases de progressão da neoplasia, desde os estágios iniciais da doença (células de crescimento radial - RGP), até a fase metastática, não só em cultura de células em monocamada (2D), como também através do desenvolvimento de modelos celulares tridimensionais (3D), mistos ou não com fibroblastos humano, cuja proposta é mimetizar in vitro as reais condições de tumorigênese existentes in vivo, tais como o contato célula-célula entre as linhagens neoplásicas e os fibroblastos da derme, o contato célula-matriz extracelular (matriz de colágeno), além de propiciar o crescimento tumoral de forma livre de adesão ao substrato, o que é característico dos processos malignos. Em uma primeira etapa, o fármaco fotossensível Ftalocianina de Cloroalumínio (AlClPc) foi escolhido como agente fotossensibilizante utilizado nos estudos, sendo este encapsulado em vesículas lipossomais, propiciando a solubilidade do composto em meio aquoso, otimizando sua entrada nas células. As propriedades fotoquímicas e fotofísicas da formulação lipossomal foram avaliadas, garantindo que a encapsulação não interfere na capacidade fotodinâmica do agente. Como segunda etapa, a formulação foi testada nos modelos celulares 2D e 3D acima descritos, realizando-se não só estudos de toxicidade, mas também ensaios de morte celular (apoptose versus necrose), incorporação intracelular do fármaco (uptake), de forma quantitativa e também qualitativa, demonstrando a localização intracelular preferencial do fármaco. Tanto em culturas 2D como em culturas 3D, a formulação AlClPc lipossomal apresentou atividade farmacológica superior aos sistemas aplicáveis em TFD, já descritos na literatura, o que abre caminhos para a realização de estudos in vivo em animais com boas perspectivas de resposta ao tratamento do melanoma humano, com possibilidades de futuras aplicações clínicas. / Melanoma is the type of skin cancer with poor prognosis due to its high probability of suffering metastases. Currently there are few effective treatments for the this, and the survival of patients with metastases is very low, around 8 months, with cure rates of these conditions do not exceed 1%. Photodynamic therapy (PDT) is a therapeutic modality selective and non-invasive, it has shown excellent clinical results in the treatment of non-melanoma skin cancers such as squamous and basal cell carcinoma. This work discusses the effectiveness of PDT in human melanoma cell lines in different stages of tumor progression, from the early stages of the disease (radial growth phase cells - RGP), to the metastatic stage, not only in cell culture in monolayer (2D), but also through the development of three-dimensional cellular models (3D), mixed or not with human fibroblasts, which aims to mimic in vitro, the real conditions existing in in vivo tumorigenesis, such as cell-cell contact between cancer cell lines and fibroblasts of the dermis, the contact cell-extracellular matrix (collagen matrix), as well as futher the growth of the tumor cells free from the substrate adhesion, which is characteristic of malignant processes. In a first step, the photosensitizer Cloroaluminum Phthalocyanine (AlClPc) was chosen to be used in the studies, which is encapsulated in liposomal vesicles, allowing the solubility of the drug in water, optimizing its intracellular incorporation. Furthermore, the photochemical and photophysical properties of the liposomal formulation were evaluated, ensuring that the encapsulation does not interfere with its photodynamic activity. As a second step, the formulation was tested in cellular models 2D and 3D above described, performing not only toxicity, but assays of cell death (apoptosis versus necrosis), intracellular drug incorporation (uptake), both quantitative and also qualitative, showing the main intracellular localization of the photosensitizer. Both in 2D cultures and 3D cultures, the liposomal AlClPc showed better pharmacological activity than the current applied PDT protocols, already described in the literature, and this is an open field for in vivo studies with animals with good prospects for responses to the treatment of human melanoma with possibilities for future clinical applications.

O melanoma maligno é o tipo de câncer de pele com pior prognóstico, devido à sua elevada probabilidade de causar metástases. Atualmente existem poucos tratamentos efetivos para o tratamento do melanoma, sendo que a sobrevida de pacientes que apresentam metástases é muito baixa, em torno de 8 meses, sendo que as taxas de cura nestas condições não ultrapassam 1%. A terapia fotodinâmica (TFD) é uma modalidade terapêutica seletiva e não invasiva, que vem demonstrando excelentes resultados clínicos no tratamento de tumores de pele do tipo não melanoma, como carcinoma espino e basocelular. O trabalho em questão aborda a efetividade da TFD, em linhagens humana de melanoma em diferentes fases de progressão da neoplasia, desde os estágios iniciais da doença (células de crescimento radial - RGP), até a fase metastática, não só em cultura de células em monocamada (2D), como também através do desenvolvimento de modelos celulares tridimensionais (3D), mistos ou não com fibroblastos humano, cuja proposta é mimetizar in vitro as reais condições de tumorigênese existentes in vivo, tais como o contato célula-célula entre as linhagens neoplásicas e os fibroblastos da derme, o contato célula-matriz extracelular (matriz de colágeno), além de propiciar o crescimento tumoral de forma livre de adesão ao substrato, o que é característico dos processos malignos. Em uma primeira etapa, o fármaco fotossensível Ftalocianina de Cloroalumínio (AlClPc) foi escolhido como agente fotossensibilizante utilizado nos estudos, sendo este encapsulado em vesículas lipossomais, propiciando a solubilidade do composto em meio aquoso, otimizando sua entrada nas células. As propriedades fotoquímicas e fotofísicas da formulação lipossomal foram avaliadas, garantindo que a encapsulação não interfere na capacidade fotodinâmica do agente. Como segunda etapa, a formulação foi testada nos modelos celulares 2D e 3D acima descritos, realizando-se não só estudos de toxicidade, mas também ensaios de morte celular (apoptose versus necrose), incorporação intracelular do fármaco (uptake), de forma quantitativa e também qualitativa, demonstrando a localização intracelular preferencial do fármaco. Tanto em culturas 2D como em culturas 3D, a formulação AlClPc lipossomal apresentou atividade farmacológica superior aos sistemas aplicáveis em TFD, já descritos na literatura, o que abre caminhos para a realização de estudos in vivo em animais com boas perspectivas de resposta ao tratamento do melanoma humano, com possibilidades de futuras aplicações clínicas. / Melanoma is the type of skin cancer with poor prognosis due to its high probability of suffering metastases. Currently there are few effective treatments for the this, and the survival of patients with metastases is very low, around 8 months, with cure rates of these conditions do not exceed 1%. Photodynamic therapy (PDT) is a therapeutic modality selective and non-invasive, it has shown excellent clinical results in the treatment of non-melanoma skin cancers such as squamous and basal cell carcinoma. This work discusses the effectiveness of PDT in human melanoma cell lines in different stages of tumor progression, from the early stages of the disease (radial growth phase cells - RGP), to the metastatic stage, not only in cell culture in monolayer (2D), but also through the development of three-dimensional cellular models (3D), mixed or not with human fibroblasts, which aims to mimic in vitro, the real conditions existing in in vivo tumorigenesis, such as cell-cell contact between cancer cell lines and fibroblasts of the dermis, the contact cell-extracellular matrix (collagen matrix), as well as futher the growth of the tumor cells free from the substrate adhesion, which is characteristic of malignant processes. In a first step, the photosensitizer Cloroaluminum Phthalocyanine (AlClPc) was chosen to be used in the studies, which is encapsulated in liposomal vesicles, allowing the solubility of the drug in water, optimizing its intracellular incorporation. Furthermore, the photochemical and photophysical properties of the liposomal formulation were evaluated, ensuring that the encapsulation does not interfere with its photodynamic activity. As a second step, the formulation was tested in cellular models 2D and 3D above described, performing not only toxicity, but assays of cell death (apoptosis versus necrosis), intracellular drug incorporation (uptake), both quantitative and also qualitative, showing the main intracellular localization of the photosensitizer. Both in 2D cultures and 3D cultures, the liposomal AlClPc showed better pharmacological activity than the current applied PDT protocols, already described in the literature, and this is an open field for in vivo studies with animals with good prospects for responses to the treatment of human melanoma with possibilities for future clinical applications.

No description available.

L’accumulation cérébrale progressive de peptides amyloïdes générés à partir du clivage du précurseur du peptide amyloïde (APP) par les sécrétases est un mécanisme central de la maladie d’Alzheimer. C’est pourquoi, améliorer la compréhension de la régulation et de l’homéostasie du métabolisme de l’APP est devenu primordial. Partant de ce constat, nous avons supposé qu’une partie de la réponse pourrait être apportée par la caractérisation de nouveaux acteurs du métabolisme de l’APP. De part leurs rôles cruciaux dans le cerveau (développement, plasticité et réparations) et dans le métabolisme de l’APP (α-sécrétases), les ADAMs sont des protéines d’intérêt dont certaines fonctions ou rôles restent à déterminer. Précédemment, par une approche transcriptomique ciblant la famille des ADAMs dans des cerveaux de patients et de contrôles, ADAM30 a été retrouvée sous-exprimée dans le cerveau des patients atteints de la pathologie. Dans deux modèles cellulaires nous avions constaté que la sous-expression d’ADAM30 entraînait une augmentation de tous les produits du métabolisme de l’APP comme chez les patients. Le résultat opposé a été obtenu lors de la sur-expression d’ADAM30 dans ces cellules. Pour tenter de répliquer ces résultats dans un modèle plus proche de la physiopathologie humaine, nous avons développé un modèle de souris triples transgéniques surexprimant l’APPSweInd et ADAM30 de manière conditionnelle. Dans ce modèle nous avons observé et mesuré une diminution des dépôts amyloïdes dans le cerveau des souris exprimant ADAM30. Dans un second temps puisqu’il avait été montré au laboratoire qu’ADAM30 ne module pas l’activité des sécrétases et ne clive pas directement l’APP, nous avons cherché à déterminer les substrats d’ADAM30 dans le cadre du métabolisme de l’APP. Par une approche systématique nous avons pu déterminer que la Cathepsine D (CTSD) et l’Insuline Receptor Substrat 4 (IRS4) sont deux substrats potentiels d’ADAM30. Dans nos modèles cellulaires et de souris, nous avons pu constater qu’ADAM30 est capable de cliver et d’activer la CTSD. L’activité de la CTSD semble nécessaire pour l’action d’ADAM30 sur le métabolisme de l’APP. Nous avons pu déterminer que l’action spécifique d’ADAM30 pour la CTSD est dépendante de la séquence d’adressage au lysosome située dans l’extrémité C-terminale de l’APP. Comme la CTSD est une protéine Lysosomale, ADAM30 pourrait favoriser spécifiquement l’activation de la CTSD augmentant ainsi la dégradation de l’APP au sein de la voie endosome/lysosome. Ce mécanisme limiterait l’entrée de l’APP dans son métabolisme et donc la production de peptides amyloïdes. Afin de mieux comprendre la spécificité d’action d’ADAM30 pour la CTSD et l’APP, nous avons commencé à travailler sur le rôle potentiel d’IRS4 et la relation entre la voie de signalisation de l’Insuline et le métabolisme de l’APP. Nos travaux nous ont donc permis de mettre en évidence un nouvel acteur du métabolisme de l’APP, ADAM30, intervenant dans la régulation et la dégradation de ce dernier et ainsi d’améliorer notre compréhension des mécanismes de régulations fins impliqués dans le processus physiopathologique de la maladie d’Alzheimer. / Progressive intra-cerebral accumulation of amyloid peptides formed after sequential cleavage of the amyloid peptide precursor (APP) by secretases , is a central mecanism for Alzheimer’s disease. Therefore, a better understanding of APP regulation and homeostasy is now crucial. With this background, we postulate that the characterization of new actors in the APP metabolism could provide a more subtle understanding of this APP metabolism and trafficking. From their obvious implication in brain (development, plasticity and repair) and in APP metabolism (α-secretases), ADAMs (A Disintegrin And Metalloprotease) are an important protein proteins family which still have some undetermined function or role. Previously, a transcriptomic approach targeting ADAMs family bas been done at the laboratory on Alzheimer’s patient or control brains and found ADAM30 as under-expressed in Alzheimer’s patient brains. On cellular models, we confirmed that ADAM30 under-expression was associate with an increase in production/secretion of all the APP metabolim byproducts. Opposite results were found with ADAM30 over-expression. To replicate those results in another model closest to human pathophysiology, we have developed a triple transgenic mice model over-expressing APPSweInd and conditionally over-expressing ADAM30. In this model, we have observed and measured a decrease in amyloid deposits in mice brains over-expressing ADAM30. Secondly, because ADAM30 did not modulate secretase activities and did not cleave APP directly, we decided to determine ADAM30 substrats in the APP metabolism context. With a systematic approach, we have determined that Cathepsin D (CTSD) and Insulin Receptor Substrat 4 (IRS4) are two ADAM30 potential substrats. In our cellular models, we have found that ADAM30 is able to cleave and activate CTSD. This CTSD activity is required for ADAM30 action on APP metabolism. We have determined that ADAM30 specific action for CTSD is dependent on lysosome adressing sequence localised in APP C-terminal part. CTSD is a lysosomal protein and so ADAM30 would make CTSD specific activation easier. This mecanism would be able to increase APP degradation in endosome/lysosome pathway and reduce APP entry in its metabolism. To better understand ADAM30 specific action on CTSD and APP, we begin to investigate the potential role of IRS4 and the relation between insulin signaling pathway ans APP metabolism. Combined together, those data suggest that ADAM30 is a new APP metabolism actor, involved in an early APP regulation and degradation pathway dependent on lysosome activation. This study participate in a better understanding of the fine mecanism regulations involved in Alzheimer’s disease pathophysiological process.