Thesis (Ph. D.)--Chemistry and Biochemistry, Georgia Institute of Technology, 2005. / Weck, Marcus, Committee Chair ; Jones, Christopher, Committee Member ; Collard, David, Committee Member ; Liotta, Charles, Committee Member ; Bunz, Uwe, Committee Member. Includes bibliographical references.

Thesis (Ph.D.) -- McMaster University, 2001. / Includes bibliographical references. Also available via World Wide Web.

Fully conjugated porphyrin nanorings combine an end-free π-system with well defined size and shape. They provide models for testing our understanding of light harvesting in natural photosynthetic systems, and may lead to the creation of new functional materials. This thesis describes the template-directed synthesis of novel 10, 16, 18, 20, 24, 30, 40 and 50-porphyrin nanorings using small templates, as well as the investigation of their structure, electronic properties and supramolecular chemistry in solution and on surfaces. This work illustrates the scope of Vernier templating as a tool for the synthesis of monodisperse molecules of unprecedented sizes. Chapter 1 introduces key properties of porphyrins and π-conjugated linear and cyclic porphyrin oligomers and describes the principle methods of preparing non-conjugated and conjugated cyclic polymers. It also covers recent advances in the synthesis of fully-conjugated porphyrin nanorings, in particular Vernier templating. Chapter 2 discusses the formation of higher order porphyrin nanorings (18- and 24-porphyrin nanorings) in the classical synthesis of 6-porphyrin nanoring and the Vernier-templated synthesis of 12-porphyrin nanoring. Chapter 3 describes the Vernier-templated synthesis of 24-porphyrin nanoring and its characterization. Chapter 4 shows that the flexibility of 24-porphyrin nanoring can be locked by the formation of a “sandwich” complex in the presence of a bidentate ligand or by solvent-induced formation of aggregates. Chapter 5 demonstrates the use of templates to control the cyclooligomerization of linear porphyrin oligomers. Vernier-templated synthetic routes to 10-, 30- and 40-porphyrin nanorings are investigated. Chapter 6 reports the electronic properties of porphyrin nanorings as probed by electrochemistry (for 6 porphyrin nanoring) or fluorescence anisotropy measurements (for 24 porphyrin nanoring). Crystal structures of 6 and 12 porphyrin nanoring template complexes are presented. Chapter 7 contains experimental procedures and characterization data of known and novel compounds synthesized in the course of this thesis.

Thesis (Ph. D.)--State University of New York at Binghamton, Department of Chemistry, 2009. / Includes bibliographical references.

Thesis (M.SC.) - Carleton University, 2007. / Includes bibliographical references (p. 85-93). Also available in electronic format on the Internet.

In der vorliegenden Dissertation wurden mittels kontrolliert radikalischer Polymerisationstechniken alkinhaltige Blockcopolymere synthetisiert. In effizienten Cu(I)-katalyisierten 1,3-dipolaren Cycloadditionen (Click-Chemie) wurde diese modifiziert. Insbesondere durch die Addition dendritischer Verbindungen gelang die Darstellung nanosopischer Objekte. Darüber hinaus konnten dünne Filme phasenseparierten Blockcopolymere selektiv und ortsaufgelöst funktionalisiert werden. Die Arbeit liefert somit Beiträge zur Entwicklung neuartiger Nanomaterialien sowie ihrer Modifizierung.

In this thesis, the response of DNA and RNA to linear and torsional mechanical stress is studied using coarse-grained models. Inspired by single-molecule assays developed over the last two decades, the end-to-end extension, buckling and torque response behaviour of the stressed molecules is probed under conditions similar to experimentally used setups. Direct comparison with experimental data yields excellent agreement for many conditions. Results from coarse-grained simulations are also compared to the predictions of continuum models of linear polymer elasticity. A state diagram for supercoiled DNA as a function of twist and tension is determined. A novel confomational state of mechanically stressed DNA is proposed, consisting of a plectonemic structure with a denaturation bubble localized in its end-loop. The interconversion between this novel state and other, known structural motifs of supercoiled DNA is studied in detail. In particular, the influence of sequence properties on the novel state is investigated. Several possible implications for supercoiled DNA structures in vivo are discussed. Furthermore, the dynamical consequences of coupled denaturation and writhing are studied, and used to explain observations from recent single molecule experiments of DNA strand dynamics. Finally, the denaturation behaviour, topology and dynamics of short DNA minicircles is studies using coarse-grained simulations. Long-range interactions in the denaturation behaviour of the system are observed. These are induced by the topology of the system, and are consistent with results from recent molecular imaging studies. The results from coarse-grained simulations are related to modelling of the same system in all-atom simulations and a local denaturation model of DNA, yielding insight into the applicability of these different modelling approaches to study different processes in nucleic acids.

This work is generally aimed to synthesize POSS based BCPs via RAFT polymerization, to study their self-assembly behaviors, to research on the effect of POSS self-assembly structure on the bulk properties and to prepare nanostructured hybrid epoxy via self-assembly of POSS based copolymer. In Chapter1, We studied the RAFT polymerization of POSS macromers and capable to synthesize well defined POSS based BCPs with high POSS fraction and different topology such as AB，BAB and (BA)3. The vertex group and the morphology effect on thermo-mechanical properties of POSS based BCPs as well as the structure-property relationship was investigated. Dispersion RAFT polymerization in apolar solvent was applied and various aggregates with different morphology in Chapter2. Cooling induced reversible micelle formation and transition was found and the pathway selection in vesicle formation was investigated. Nano-construction of O/I hybrid epoxy materials based on POSS based copolymers was investigated in Chapter4. The effect of functional group content on miscibility of POSS based statistic copolymer and epoxy was investigated. A novel method to nanostructure epoxy hybrid involving self-assembly of POSS based BCPs in epoxy was presented. High homogeneity and well size/morphology control of core-corona structure containing rigid POSS core and soluble PMMA corona in networks were obtained.

Au cours de la dernière décennie, quelques (rares) exemples de copolymères à blocs présentant des liens supramoléculaires entre les blocs constitutifs ont été décrits. En raison du caractère réversible de l’association des blocs macromoléculaires, de tels polymères sont d’un grand intérêt pour le développement de matériaux nanostructurés, ayant des propriétés auto-cicatrisantes ou à processabilité améliorée. L’objectif principal de cette thèse est d’élaborer de nouvelles architectures supramoléculaires, en combinant la polymérisation RAFT et l’association spécifique par liaisons H des groupements thymine et diaminopyridine. La stratégie employée a consisté dans un premier temps en la synthèse d’agents de transfert et d’un amorceur radicalaire fonctionnalisés par des unités complémentaires thymine et diaminopyridine. Ces précurseurs ont permis de générer, par polymérisation RAFT, des polymères α- ou α,ω-fonctionnalisés de manière quantitative par ces motifs à liaisons H. L’auto-assemblage des blocs polymères ainsi obtenus a été mis en évidence par RMN 1H, AFM et par des mesures rhéologiques. Cette démarche a été adaptée dans un second temps à l’élaboration de copolymères greffés supramoléculaires hydrophiles, basés sur le complexe d’inclusion β-cyclodextrine/adamantane. / Over the past decade, some (rare) examples of block copolymers with supramolecular links between the building blocks have been described. Because the association between macromolecular blocks is a reversible process, such polymers are of great interest in the field of nanostructured materials, self-healing materials, or processing aid. The main goal of this work is to develop new supramolecular architectures, by a combination of RAFT polymerization and H-bonding. In a first step, several chain transfer agents and a radical initiator possessing complementary thymine or diaminopyridine H-bonding moeties were synthesized. These precursors were used to generate a panel of polymers α- or α,ω-functionalized with these H-bonding stickers in a quantitative manner. The self-assembly of the resulting polymer blocks was highlighted by 1H NMR, AFM and rheological measurements. This approach was subsequently adapted to the development of hydrophilic supramolecular comb-shaped polymers, based on the β-cyclodextrin/adamantane host/guest complexation.

En vue de vectoriser de façon ciblée des microcapsules de parfum vers un substrat textile pour des applications lessivielles, ce travail de thèse s’est consacré à la modification chimique de la surface de ces microcapsules en milieu aqueux par des polysaccharides ayant des affinités particulières pour les substrats de cellulose (agent d’aide au dépôt). Pour ce faire, une approche mettant en jeu des fonctionnalités époxy a été développée en deux étapes : fonctionnalisation de la surface des microcapsules par des molécules relais, puis greffage covalent d’un polysaccharide via la fonctionnalité époxy. Après chaque étape de greffage covalent en surface des microcapsules, différentes stratégies de caractérisations ont été mises en place (spectroscopies infrarouge, RAMAN, RMN du solide, XPS, ATG, mesure du potentiel zêta, gravimétrie, microscopie optique et fluorescente). Des expériences témoins ont également été réalisées pour prouver la non-adsorption des greffons de surface sur les microcapsules. La synthèse et le greffage de polysaccharides marqués avec des sondes fluorescente, alcyne et méthacrylate nous ont également permis d’appuyer nos conclusions. Afin d’envisager des modifications chimiques en milieu aqueux, la stabilité des composés époxy dans l’eau a dû être étudiée de façon précise par spectroscopie RMN en solution et nous avons abouti avec succès à une meilleure compréhension des phénomènes réactionnels époxy-amine et époxy-hydroxyle en milieu aqueux.Enfin, une enzyme (la lipase) a également pu être greffée de façon covalente via la fonctionnalisation époxy tout en conservant son activité catalytique. / Colloidal suspensions are of paramount significance in industrial applications. They are employed in various domains like paintings, inks, pigments, pharmacology, cosmetics, food,textile, composite materials or waste water treatment. Properties of colloids strongly depend on parameters such as the chemical composition, dimensions or morphology. To confer additional features to the colloids, i.e. stability, compatibilization, targeting, stealth properties and so on, it is also crucial to tailor their surface functionalization. In this work, we intend to develop a methodology allowing for tuning the surface properties of highly cross-linked fragrance microcapsules to graft polysaccharides. To do so, the first objective of this work is to identify functionalities at the surface (of the colloids) amenable to post-modifications. Based on this crucial insight, suitable surface chemistries are further explored to impart new properties to the colloids. Thus the presence of amine functions is highlighted by ninhydrine tests and then exploited to incorporate new functionalities at the surface of colloids.Incorporation of fluorescent tags (such as  Rhodamine Isothiocyanate, RITC), intermediate polymer epoxy chains (α,ω-epoxy functionalized polyethylene glycol or PGMA) are performed. Depending on the nature of the moieties to be grafted, the resulting colloids are subsequently characterized by Confocal Laser Scanning Microscopy (CLSM), FTIR, XPS, and RAMAN Spectroscopy. After this first step of functionnalization, epoxy rings at the surface are used to postgraft polysaccharides.