Thesis (Ph. D.)--Auburn University. / Abstract. Vita. Includes bibliographical references (p. 145-154).

This thesis examines the expressive culture of urban chicken-keepers in Eugene, Oregon in an attempt to explain why this practice has become so popular in recent years as well as to understand what role it plays in their lives. Data for this project were gathered using ethnographic fieldwork methods such as participant observation in “real life” and in social media outlets, semi-structured interviews with participants encountered at The Eugene Backyard Farmer, and a 54-question anonymous online survey of people who frequented the shop’s social media outlets. Based on an analysis of those data, this thesis contends that this group of people is using urban chicken-keeping as a way to intentionally reframe the future in a more positive light and that this can be seen in the articulation of their values and ideologies and through the way that they are traditionalizing urban chicken-keeping.

The efficacy of USDA approved antimicrobials was evaluated in reducing Salmonella and Campylobacter on ground chicken frames and chicken breast fillets. Chicken frames dip treated with peracetic acid (PAA), lauric arginate (LAE), cetylpyridinium chloride (CPC) and acidified lactic acid (ALA) reduced Salmonella and Campylobacter counts in ground chicken frames without affecting meat pH and color. PAA and LAE reduced Salmonella by 0.9 log on d0 whereas on d1, PAA and CPC reduced by 1.4 and 0.9 log CFU/g respectively. PAA, ALA, propionic acid and LAE significantly reduced Campylobacter by 0.7, 1.0, 1.3, and 1.2 log CFU/g, respectively. On chicken breast fillets, 30 s application of PAA (0.04% and 0.07% pH 6.5) reduced loosely attached Salmonella by 0.5 and 0.8 log CFU/ml, respectively. ALA, octanoic acid and PAA reduced loosely attached Campylobacter by 1 log while all treatments except propionic acid were effective against strongly attached cells on chicken breast fillets.

No description available.

Gastrulation is a key early developmental event that generates the three primary germ layers (ectoderm, mesoderm, and endoderm) from which organ systems subsequently develop. The physical mechanisms of germ layer formation differ significantly in amniotes (reptiles, birds, and mammals) and anamniotes (e.g. frog and fish), as amniote gastrulation includes an epithelial-mesenchymal transition (EMT) that is absent from anamniote gastrulation. Despite this striking difference, much of our knowledge regarding the mechanisms underlying gastrulation is derived from frog and fish studies. To better understand amniote gastrulation, the work herein investigates three signaling pathways that regulate amniote gastrulation with distinct and overlapping functions. The central hypothesis is that multiple signaling pathways function cooperatively to precisely modulate cell migration through the primitive streak during avian gastrulation.First, I describe a novel function of Fibroblast Growth Factor (FGF) signaling in the preingression epiblast adjacent to the avian primitive streak, where it governs the expression of molecules from diverse signaling pathways and transcription factor families, and which is mediated largely through the Ras/MAPK pathway. Importantly, FGF signaling also regulates cell migration during avian gastrulation.Next, I report the isolation of a novel chicken non-canonical Wnt ligand (Wnt11b) that is specifically expressed in the primitive streak and adjacent preingression epiblast during gastrula stages. In gain and loss of function studies, Wnt11b and Wnt5a/b participate in regulating cell migration through the streak in a largely redundant fashion. Signaling specifically targets the non-canonical pathway, as similar cell migration defects are observed with a non-canonical mutant of Dishevelled, and activating the canonical pathway has no effect on cell migration.Finally, I investigate the function of A-class Eph-ephrin signaling during avian gastrulation, and describe that Eph receptor forward signaling negatively regulates the migration of cells through the primitive streak. This modulation of cell migration occurs independently of the EMT that accompanies avian gastrulation, as cells are able to undergo the normal cadherin transition and the basal lamina is unaffected.Altogether, the work presented herein provides a significant contribution to our understanding of signaling pathways that modulate gene expression and ongoing cell migration during germ layer formation in amniote gastrulation.

No description available.

Typescript (photocopy). / Digitized by Kansas Correctional Industries

Typescript (photocopy). / Digitized by Kansas Correctional Industries

Neuroendocrine cell populations were systematically studied and characterized in the thymus, an avian primary immune organ. The expression of the specific mRNAs for both Chromogranin A (CgA) and Carboxypeptidase E (CpE) in the thymus was first verified by RT-PCR. Additional evidence using immunofluorescent dual labeling, has demonstrated for the first time the co-existence of CgA and CpE in identical neuroendocrine cells at the protein level in a vetebrate primary lymphoid organ. These CpE- and CgA-positive cells were primarily found in the transition zone between the cortex and the medulla of the thymic lobules, an area known to contain numerous arterioles and to be heavily innervated by the autonomic nervous system, suggesting that these cell population can potentially receive input from each other, from the autonomous nervous system, from the circulation, or all of the above. (Neuro)endocrine messenger molecules produced by the thymic microenvironment, such as somatostatin (SST), seem to play a potentially important immunomodulatory role with regard to cell proliferation, differentiation, and migration, as well as cytokine production. The results showed that both SST and its receptor, SSTR2, are expressed locally within chicken thymus. The in vitro study showed that SST significantly inhibits IL-2 and concanavalin A (ConA) induced proliferation of thymocytes. In comparison with controls (medium containing IL-2 and ConA but without SST), addition of SST at 10-9 M and 10-6 M resulted in a nearly 20% decrease in proliferation (P < 0.01). The effects of somatostatin (SST) on the immune system, the role of SST on the gene expression of cytokines (IL-1, TGF, INF), chemokine receptors (CXCR4) as well as MHC-I components was assessed by real-time PCR. The question as to exactly which stimuli trigger the release of mediators such as somatostatin remains for future study. In addition, a complete inventory of all substances stored in the thymic LDCV and their effects on the developing T-cells when released in the microenvironment of the thymus are also questions that warrant further investigation.

The purpose of this work was to examine the effectiveness of several replacements for antibiotics in broiler chickens using bacterial challenge models. For this work, pathogen challenge models were developed using three model pathogens; two human pathogens (<i>Salmonella enteritidis</i> and <i>Campylobacter jejuni</i>), and one poultry pathogen (<i>Clostridium perfringens</i>). The first set of experiments involved the selection and use of 2 model probiotics; <i>Bifidobacterium animalis</i> and <i>Lactobacillus fermentum</i>. Oral administration of either probiotic did not significantly reduce (P < 0.05) the level of intestinal colonization by either <i>S. enteritidis</i> or <i>C. jejuni</i> in experimentally infected broiler chickens. The next set of experiments examined the effectiveness of orally administered, pathogen-specific antibodies obtained from hyperimmunizing laying hens in controlling bacterial infections with <i>S. enteritidis</i>, <i>C. jejuni</i> or <i>Clostridium perfringens</i> in broiler chickens. Regardless of the concentration, or mode of administration, anti-<i>S. enteritidis</i> hen-egg antibodies or anti-<i>C. jejuni</i> hen-egg antibodies were unable to significantly reduce (P < 0.05) the intestinal colonization by either pathogen in experimentally infected broiler chickens. Likewise, administration of anti-<i>C. perfringens</i> hen-egg antibodies did not reduce intestinal colonization by <i>C. perfringens</i>, and actually exacerbated the clinical outcome of this important poultry pathogen by significantly increasing (P < 0.05) intestinal lesions scores compared to negative control birds. Lastly, the effect of dietary protein source on intestinal <i>C. perfringens</i> populations was investigated. In broiler chickens experimentally infected with <i>C. perfringens</i> and fed diets which varied in the source of dietary protein, it was shown that birds fed fish meal, meat/bone meal, feather meal and potato protein concentrate had significantly higher intestinal <i>C. perfringens</i> counts than the birds fed corn gluten meal, soy or pea protein concentrates or the control diet (P < 0.05). Further, it was shown that the glycine content of the diets and ileal contents was significantly, positively correlated with <i>C. perfringens</i> numbers in ileum and cecum. It is concluded that although the intervention strategies employed in these studies show promise, diet composition clearly had the largest effect on intestinal bacterial populations. Further studies are required to examine both the impact that diet and these intervention strategies have on the factors which control intestinal colonization by pathogens on a case by case basis.