Thesis (Ph. D.)--University of Virginia, 2008. / Includes bibliographical references. Also available online through Digital Dissertations.

En premier lieu, l'horloge circadienne des mammifères joue un rôle fondamental dans le foie en régulant le métabolisme des acides gras, du glucose et des xénobiotiques. L'altération de ce rythme a été montrée comme menant à diverses pathologies incluant le syndrome métabolique. Il est supposé que l'horloge circadienne régule principalement le métabolisme en régulant l'expression des enzymes hépatiques au niveau transcriptionnel. Nous montrons que l'horloge circadienne contrôle au ssi le métabolisme hépatique en synchronisant un rythme secondaire d'une période de 12 heures caractérisé par l'activation rythmique de la voie IRE1a dans le RE. L'absence d'horloge circadienne perturbe cette horloge secondaire et provoque une dérégulation des enzymes localisées dans le RE. Cela mène à une altération du métabolisme lipidique, résultant en une activation aberrante du facteur de transcription SREBP. Cette altération dans le métabolisme lipidique circadien chez les souris sans horloge pourrait être impliquée dans l'apparition du syndrome métabolique. D'autre part, la croissance cellulaire animale est principalement régulée par la détection des nutriments et est principalement médiée par la voie TOR. Chez la souris, un gène est identifié pour la kinase TOR et son association en complexe avec d'autres protéines permet de discriminer TORC1 et TORC2. TORC1 est la forme majeure sensible à la rapamycine et est le premier médiateur de la détection d'énergie et d'acides aminés pour le contrôle de la croissance. Ce contrôle consiste en la régulation de la traduction par la phosphorylation de S6 Kinase et 4E-BP et le contrôle de la biogenèse des ribosomes. Nous sommes intéressés de montrer si l'horloge circadienne régule la traduction régulée par TOR dans le foie de souris. / In one hand, The mammalian circadian clock plays a fundamental role in the liver by regulating fatty acid, glucose, and xenobiotic metabolism. Impairment of this rhythm has been shown to lead to diverse pathologies, including metabolic syndrome. Currently, it is supposed that the circadian clock regulates metabolism mostly by regulating expression of liver enzymes at the transcriptional level. We show that the circadian clock also controls hepatic metabolism by synchronizing a secondary 12 hr period rhythm characterized by rhythmic activation of the IRE1a pathway in the endoplasmic reticulum. The absence of circadian clock perturbs this secondary clock and provokes deregulation of endoplasmic reticulum localized enzymes. This leads to impaired lipid metabolism, resulting in aberrant activation of the sterol-regulated SREBP transcription factors. The resulting aberrant circadian lipid metabolism in mice devoid of the circadian clock could be inv olved in the appearance of the associated metabolic syndrome.In a second hand, the tissue growth in animals is principally regulated by nutrient sensing and principally by the protein kinase TOR. In mice one gene is identified as TOR kinase and the association of Tor protein associated with 2 different complex of protein (TORC1 and TORC2). TORC1 is the major rapamycin sensitive form and is the primary mediator of energy and amino acid sensing for growth control. This control consists in the regulation of translation through the phosphorylation of S6 Kinase (ribosomal S6 kinase) and 4E-BP (Eif4E binding protein) and the control of ribosome biogenesis. We are interested to show if the circadian clock regulate TOR translation regulation in mice liver.

Master of Science / Department of Architectural Engineering and Construction Science / Fred Hasler / Over 26.6 million people suffer from Alzheimer's Disease in the United States, and while no cure exists, how their built environment is illuminated - lamp type, color selection, wavelengths emitted, luminaire specifications, and luminaire layout - may enhance the lives of Alzheimer's patients (APs), their relatives, and caretakers. Research has found mixed results when it comes to selecting the correct lamp, but most researchers agree illumination levels benefit APs quality of life. Achieving higher illumination levels can be achieved by adding more luminaires to the ambient lighting layout, placing additional task lighting in specific locations, or using light therapy. Exposing APs to higher illumination levels can have positive behavioral benefits and help shift the circadian rhythm. Common problems such as aggression, sleepiness, and agitation can be reduced if proper lighting layouts or light therapy is used on a consistent basis. Adding to research, several Alzheimer’s facilities in Kansas and Colorado were contacted to complete questionnaires about their lighting and resident’s behaviors. Upon analysis, these facilities concurred with research about lamp types, daylight, and luminaire layouts showing higher levels of illumination were preferred by APs and also where they displayed their best behaviors. Ninety percent of facilities agreed that APs enjoyed sitting by the windows, and over half agreed APs exhibited better behavior while seated here. Homes with CLFs documented APs were typically more calm and happy than those with tubular fluorescents, but the conclusions made need additional research to support the findings.

O sistema circadiano das aves é composto pela retina, a região homóloga aos núcleos supraquiasmáticos de mamíferos (NSQ) e a glândula pineal. A retina apresenta muitos eventos fisiológicos rítmicos, como por exemplo os movimentos das células fotorreceptoras em vertebrados não mamíferos, a expressão de opsinas, regeneração do cromóforo visual e produção e liberação de melatonina e dopamina. Todos estes eventos rítmicos são coordenados para prever alterações nas condições luminosas que ocorrem durante o dia, otimizando a função retiniana. Neste trabalho foi investigada a expressão de componentes chave de um sistema circadiano, incluindo os dois genes de melanopsina, Opn4x e Opn4m, os genes de relógio Clock e Per2, e os genes das enzimas chave da síntese de melatonina, N-Acetiltransferase, e de dopamina, Tirosina Hidroxilase, em células da retina de embriões de galinha. Culturas primárias de retina de embriões de galinha com 8 dias foram preparadas no ZT0 (quando as luz é acesa) e semeadas na densidade de 107 células por frasco de 25 cm2 . As células foram mantidas em ambiente úmido, com 5% CO2, a 40o C, em escuro constante, fotoperíodo 12C:12E, fotoperíodo 12C:12E seguido de escuro constante, ou em escuro constante na presença e na ausência de glutamato 100 μM por 12 h. A extração de RNA total foi feita ao longo de 24 horas com intervalo de três horas tendo início no ZT0 do sexto dia. As amostras foram submetidas a RT-PCR seguido de PCR quantitativo para a quantificação de RNAm. Para confirmar a expressão da proteína OPN4x foi realizado ensaio imunohistoquímico com anticorpos anti-melanopsina de galinha desenvolvidos em coelho. Também foi feita a quantificação da concentração das proteínas OPN4x, CLOCK e TIROSINA HIDROXILASE através da técnica de Western Blot. A quantificação do RNAm em escuro constante não apresentou ritmos de transcrição para nenhum gene. Já as células mantidas em fotoperíodo 12C:12E apresentaram padrões rítmicos de transcrição para Clock, Per2, Opn4m, N-Acetiltransferase e Tirosina Hidroxilase. Glutamato 100 μM foi eficaz em induzir ritmo em Clock, e inibiu drasticamente a expressão de Tirosina Hidroxilase e, apenas mais pontualmente, de Opn4x e Opn4m. Ensaios de viabilidade celular e fragmentação de DNA por citometria de fluxo demonstraram que essa inibição não foi resultante de ação tóxica ou apoptótica do glutamato. O neurotransmissor não teve qualquer efeito sobre a transcrição de Per2 e de N-Acetiltransferase. A quantificação protéica não indicou a presença de ritmo para CLOCK, OPN4x ou TIROSINA HIDROXILASE. A grande variabilidade inter-ensaios nos resultados de quantificação protéica sugere uma menor sensibilidade e precisão para esse método, quando comparado a PCR quantitativo. Nossos resultados indicam que as células de retina de embrião de 8 dias de galinha em cultura já contêm um relógio funcional, porém, este necessita do ciclo claro-escuro ou glutamato para sua sincronização. / The avian circadian system is composed by the retina, the mammalian homolog region of the supra-chiasmatic nucleus (SNC) and the pineal gland. The retina itself shows many rhythmic physiological events, such as movements of photoreceptor cells, opsin expression, retinaldehyde re-isomerization, melatonin and dopamine production and release. Altogether these rhythmic events are coordinated to predict environmental changes in light conditions during the day, optimizing retina function. In this work we investigated the expression of key components of a circadian system, including the two melanopsin genes, Opn4x, Opn4m, as well as the Clock, Per2, N-Acetyltransferase and Tyrosine Hidroxylase genes in chick embryo retinal cells. Primary cultures of chicken retina from 8-day-old embryos were prepared at ZT0 (lights on) and seeded at the density of 107 cells per 25 cm2 culture flask. The cells were kept in a humidified incubator in a 5% CO2 atmosphere at 40o C in constant dark, in 12L:12D, in 12L:12D followed by constant dark, or in constant dark in the absence or presence of 100 μM glutamate for 12 h starting at ZT0 of the fifth day in vitro. Total RNA extraction was performed along 24 hours every three hours starting at ZT0 of the sixth day. The samples were submitted to RT-PCR followed by quantitative PCR for mRNA quantification. To analyze the Opn4x expression in these cells we performed an immunocytochemistry analysis with antibodies anti-chicken melanopsin developed in rabbit. We also quantified the protein levels of OPN4x, CLOCK AND TYROSINE HYDROXYLASE by Western Blot. The mRNA quantification showed no rhythm of transcription for any gene in cells kept in constant dark. However under a light-dark cycle, Clock, Per2, Opn4m, N-Acetyltransferase and Tyrosine Hydroxylase presented rhythm patterns of transcription. 100 μM glutamate was able to induce rhythmic expression of Clock, and strongly inhibited the expression of Tyrosine Hydroxylase and, just punctually, of Opn4x and Opn4m. Assays of cell viability and DNA fragmentation using flow cytometry demonstrated that the inhibition did not result of glutamate toxic or apoptotic actions. The neurotransmitter had no effect on Per2 and N-Acetyltransferase transcription. Protein quantification by Western Blot showed no rhythmic oscillation of CLOCK, OPN4x or TYROSINE HYDROXYLASE. The great variability inter-assays seen in the results of protein quantification suggests that this method is less precise and sensitive than quantitative PCR. The present data show evidences that chicken embryonic retinal cells contain a functional circadian Clock. However light-dark cycle or glutamate stimuli are needed to its synchronization.

Este estudo tem como objetivo introduzir ao leitor a influência da luz sobre os usuários residenciais, mostrando que o avanço das tecnologias ao longo da história e o acesso à iluminação artificial elétrica proporcionaram maior conforto às atividades relacionadas a sua moradia. Novas tecnologias, mais econômicas do ponto de vista energético, possibilitaram acesso a maiores quantidades de luz pelos usuários com diferentes tons de luz branca, permitindo uma maior escolha, porém podendo influenciar na produção do hormônio melatonina, o qual regula o relógio biológico, provocando distúrbios diversos. O trabalho de campo foi realizado em residências, dividido em duas linhas de raciocínio, sendo o primeiro à leitura em uma amostra de residências aleatórias e o segundo com base em uma residência utilizada como modelo. Entretanto, nesse último caso foram alteradas as tecnologias empregadas. Em ambos os casos foram feitas medições na sala de estar em frente à televisão. Esses estudos foram fundamentados no método de Circadian Stimulus (Rea M.S., 2005, 2011), baseado em diversos estudos laboratoriais, que demostraram a influência da luz sobre a produção de melatonina, onde foi empregado nos dois procedimentos adotados. Conclui-se que, apesar da estimativa dos níveis de supressão encontrados serem baixas, as tecnologias com temperaturas de cor mais elevadas, ou seja, luzes mais brancas, tem índices de inibição maiores e devem ser evitadas, assim como as quantidades de luz praticadas para os ambientes residenciais devem ser cuidadosamente dimensionadas. Esse trabalho não tem caráter conclusivo e sim introduz uma metodologia que ainda está em fase final de estudos, porém pode contribuir para apontar diretrizes até então pouco abordadas na prática profissional e terem o intuito de orientar os usuários finais. / This study aims to introduce the reader to the influence of light on residential users, showing that the advancement of technologies throughout history and access to electric artificial lighting have provided greater comfort to the activities related to their homes. New technologies, more economically energetic, allowed access to greater amounts of light by users with different white light tones, allowing a wide choice, but may influence the production of the hormone melatonin, which regulates the biological clock, causing many disturbances. Fieldwork was carried out in residences, divided into two lines of reasoning, the first to be read in a sample of random households and the second based on a residence used as a model. However, in the latter case, the technologies employed were altered. In both cases measurements were taken in the living room in front of the television. These studies were based on the Circadian Stimulus method (Rea M.S., 2005, 2011), based on several laboratory studies, which demonstrated the influence of light on the production of melatonin, where it was used in the two adopted procedures. It is concluded that, although estimates of suppression levels found are low, technologies with higher color temperatures, meaning whiter lights, have higher inhibition rates and should be avoided, as well as the amounts of light practiced for residential environments must be carefully dimensioned. This work does not have a conclusive character but rather introduces a methodology that is still in the final phase of studies, but it can contribute to point out guidelines that have not been approached in the professional practice and are intended to guide end users

Circadian clocks are biological signalling networks which have a period of ~24 hours under constant environmental conditions. They have been identified in a wide range of organisms, from cyanobacteria to mammals and through the temporal co-ordination of biological processes are believed to increase individual fitness. The mechanisms which generate these self-sustained rhythms, the pathways of entrainment and the target outputs of the clock are all areas of great interest to circadian biologists. The plant circadian clock is believed to comprise of interlocking feedback loops of transcription and translation. The morning MYB-transcription factors CIRCADIAN CLOCK ASSOCIATED 1 (CCA1) and LATE ELONGATED HYPOCOTYL (LHY) bind to the promoter of TIMING OF CAB2 1 (TOC1) and repress its expression, as well as their own. As levels of CCA1 and LHY fall, TOC1 is expressed and activates the expression of its repressors. This is a simplified version of the known clock components and the current model contains this core loop as well as an interlocked morning and evening loop, which also incorporates some post-translational modification (Chapter 1). Understanding the plant circadian network and its entrainment are the topics of this thesis. The study has focused on two plant species, the land plant Arabidopsis thaliana and the picoeukaryotic marine algae Ostreococcus tauri. In both of these species light-mediated entrainment of the clock has been investigated (Chapter 8), as well as the core circadian mechanism. In A. thaliana the role of a circadian associated gene, EARLY FLOWERING 3 has been a particular focus for investigation, through both experimentation and mathematical models (Chapters 4 and 5). In O. tauri the responses to light signals have been tested, as have the circadian responses to pharmacological manipulation (Chapters 6, 7 and 8). The work presented identifies a role for ELF3 in the repression of circadian genes and also links it with the regulation of protein stability. Likewise, in O. tauri the regulation of protein stability is identified to be a key mechanism for sustaining circadian rhythms. As well as investigating the clock in plants, certain photoreceptors have been characterised in S. cerevisiae with the aim of linking them to a synthetic oscillator. Together the work presented in this thesis provides evidence for the circadian community to aid with the understanding of circadian rhythms in plants, and possibly other organisms.

Este estudo tem como objetivo introduzir ao leitor a influência da luz sobre os usuários residenciais, mostrando que o avanço das tecnologias ao longo da história e o acesso à iluminação artificial elétrica proporcionaram maior conforto às atividades relacionadas a sua moradia. Novas tecnologias, mais econômicas do ponto de vista energético, possibilitaram acesso a maiores quantidades de luz pelos usuários com diferentes tons de luz branca, permitindo uma maior escolha, porém podendo influenciar na produção do hormônio melatonina, o qual regula o relógio biológico, provocando distúrbios diversos. O trabalho de campo foi realizado em residências, dividido em duas linhas de raciocínio, sendo o primeiro à leitura em uma amostra de residências aleatórias e o segundo com base em uma residência utilizada como modelo. Entretanto, nesse último caso foram alteradas as tecnologias empregadas. Em ambos os casos foram feitas medições na sala de estar em frente à televisão. Esses estudos foram fundamentados no método de Circadian Stimulus (Rea M.S., 2005, 2011), baseado em diversos estudos laboratoriais, que demostraram a influência da luz sobre a produção de melatonina, onde foi empregado nos dois procedimentos adotados. Conclui-se que, apesar da estimativa dos níveis de supressão encontrados serem baixas, as tecnologias com temperaturas de cor mais elevadas, ou seja, luzes mais brancas, tem índices de inibição maiores e devem ser evitadas, assim como as quantidades de luz praticadas para os ambientes residenciais devem ser cuidadosamente dimensionadas. Esse trabalho não tem caráter conclusivo e sim introduz uma metodologia que ainda está em fase final de estudos, porém pode contribuir para apontar diretrizes até então pouco abordadas na prática profissional e terem o intuito de orientar os usuários finais. / This study aims to introduce the reader to the influence of light on residential users, showing that the advancement of technologies throughout history and access to electric artificial lighting have provided greater comfort to the activities related to their homes. New technologies, more economically energetic, allowed access to greater amounts of light by users with different white light tones, allowing a wide choice, but may influence the production of the hormone melatonin, which regulates the biological clock, causing many disturbances. Fieldwork was carried out in residences, divided into two lines of reasoning, the first to be read in a sample of random households and the second based on a residence used as a model. However, in the latter case, the technologies employed were altered. In both cases measurements were taken in the living room in front of the television. These studies were based on the Circadian Stimulus method (Rea M.S., 2005, 2011), based on several laboratory studies, which demonstrated the influence of light on the production of melatonin, where it was used in the two adopted procedures. It is concluded that, although estimates of suppression levels found are low, technologies with higher color temperatures, meaning whiter lights, have higher inhibition rates and should be avoided, as well as the amounts of light practiced for residential environments must be carefully dimensioned. This work does not have a conclusive character but rather introduces a methodology that is still in the final phase of studies, but it can contribute to point out guidelines that have not been approached in the professional practice and are intended to guide end users

O câncer de mama é o tipo de câncer que mais acomete as mulheres e a principal causa de morte na faixa entre 40 e 55 anos. Apesar de apresentar variação internacional, suas taxas seguem aumentando mundialmente, sendo até cinco vezes mais frequente em países desenvolvidos. A industrialização gera aumento da exposição à luz durante a noite, o que causa supressão de melatonina. A melatonina é o principal hormônio secretado pela glândula pineal e possui atividade oncostática e antioxidante, interfere no controle do ciclo celular, função imunológica e nos hormônios esteróides. O objetivo desta dissertação e apresentar o racional e o desenvolvimento do estudo cujo objetivo foi avaliar o efeito da terapia com melatonina sobre o desenvolvimento de tumores mamários em ratas expostas ou não a dessincronização circadiana. A indução da carcinogênese mamária foi através de administração intragástrica de DMBA em 39 ratas Sprague-dawley entre 41 e 46 dias. Os animais foram randomizados em 04 grupos, Sincronizados sem tratamento, Dessincronizados sem tratamento, Sincronizados com melatonina e Dessincronizados com melatonina. Os grupos Sincronizados foram mantidos em ciclo claro/escuro de 12/12 horas e os dessincronizados a ciclo claro/escuro de 11/11 horas, durante 8 semanas. O desenvolvimento tumoral ocorreu em 32 animais (82,05%), totalizando 73 tumores. A melatonina apresentou efeitos benéficos quanto a multiplicidade tumoral, grau histológico, tamanho dos tumores e peso dos animais, enquanto que a dessincronização não interferiu de forma significativa na carcinogênese mamária. / Breast cancer is the type of cancer that most affects women and the leading cause of death in the age between 40 and 55 years. Despite presenting international variation, their rates continue to increase worldwide, with up to five times more common in developed countries. The industrialization generates increased exposure to light at night, which causes suppression of melatonin. Melatonin is the main hormone secreted by the pineal gland and has oncostatic and antioxidant activity, interferes with cell cycle control, immune function and steroid hormones. The aim of this dissertation and present the rationale and development of the study whose objective was to evaluate the effect of melatonin therapy on the development of mammary tumors in rats exposed or not the circadian desynchronization. Induction of mammary carcinogenesis was via intragastric administration of DMBA in 39 Sprague- Dawley rats between 41 and 46 days. The animals were randomized into 04 groups, Synchronized and untreated, desynchronized and untreated, synchronized and with melatonin, desynchronized and with melatonin. Synchronized Groups were kept in a light / dark cycle of 12/12 hours and the desynchronized in a light / dark cycle of 11/11 hours for 8 weeks. The tumor development occurred in 32 animals (82.05%), totaling 73 tumors. Melatonin showed beneficial effects on tumor multiplicity, histological grade, tumor size and weight of the animals, while desynchronization did not interfere significantly in breast carcinogenesis.

Mammalian circadian rhythms are controlled by a clock located in the suprachiasmatic nucleus (SCN). The mechanisms through which light phase-shifts the SCN circadian clock are similar to those underlying memory formation and long-term potentiation (LTP). Several secreted proteins, including tissue-type plasminogen activator (tPA), plasminogen, and brain-derived neurotrophic factor (BDNF), have been implicated in this process. These same proteins are important for photic phase-shifts of the SCN circadian clock. Early night glutamate application to SCN containing brain slices resets the circadian clock. Our experiments find that the endogenous tPA inhibitor, plasminogen activator inhibitor 1(PAI-1), blocked these shifts in slices from wildtype mice but not mice lacking its stabilizing protein, vitronectin (VN). Plasmin, but not plasminogen, prevented inhibition by PAI-1. Both plasmin and active BDNF reversed alpha2-antiplasmin inhibition of glutamate-induced shifts. alpha2-Antiplasmin decreased the conversion of inactive to active BDNF in the SCN. Both tPA and BDNF allowed daytime glutamate-induced phase-resetting. Together, these data are the first to demonstrate expression of these proteases in the SCN, their involvement in modulating photic phase-shifts, and their activation of BDNF in the SCN, a potential ‘gating’ mechanism for photic phase-resetting. Using western-blot analyses of SCN tissue maintained in vitro, we find higher tPA, plasmin and mBDNF levels in the SCN at night vs. the day. Also, in vitro glutamate treatment of SCN tissue during early night increases tPA levels to ~2.5 times control levels, while similar treatments during late night and mid-day do not alter tPA expression. Glutamate treatment in the early night does not alter PAI-1, plasmin and BDNF levels. Co-treatment with glutamate and PAI-1 decreases plasmin levels (vs. glutamate treatment alone), while co-treatment with glutamate and alpha2-antiplasmin decreases the amount of pro- and mBDNF in the SCN relative to glutamate treatment alone. We also show that mBDNF levels are significantly lower in tPA knockout mice during both day and night. Together, these results support circadian clock modulation of BDNF and fibrinolytic protein levels in the SCN. They also suggest that glutamate modulates tPA expression in the SCN, while tPA and plasmin modulate BDNF expression.

Pre-hypertension (pre-HT) (Blood Pressure (BP) ≥120/80mmHg to ≤ 140/90mmHg) increases the risk of developing hypertension (HT). BP reductions following acute exercise are known as post exercise hypotension (PEH). BP and perhaps PEH shows a daily circadian rhythm. Purpose: To compare the magnitude of PEH after morning and evening aerobic exercise in adults with pre-HT. Hypothesis: The magnitude of PEH will be larger after evening versus morning exercise. Participants: Pre-HT men and women 50-65 years old. Study Design: Participants engaged in cycling exercise (60% VO2max) on two occasions: 1.5 and 11 hours following waking. Cardiovascular function was assessed for 30 minutes pre and one hour post exercise. Results: 1) Systolic PEH responses affected by TOD differed by gender. 2) Baseline Heart Rate Variability and its response to exercise differed gender but not TOD. The inconsistent significant gender and TOD differences of PEH and its mechanisms suggest that this group.