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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
11

Mögliche Rolle von Cystein-Resten in der dritten extrazellulären Schleife des humanen PTH-2 Rezeptors für dessen Ligandenspezifität / Possible role of cysteine residues in the third extracellular loop of the human PTH-2 receptor for its ligand specificity

Endress, Eva-Maria January 2006 (has links) (PDF)
Der Mechanismus, welcher den GPCR eine Unterscheidung verschiedener Liganden ermöglicht, ist immer noch ungeklärt. Der GPCR für PTH und PTHrP (=PTH1-R) bindet PTH und das strukturell recht unterschiedliche PTHrP. Beide Liganden aktivieren mit etwa vergleichbarer Potenz eben diesen PTH1-R, indem sie sowohl an die intrazelluläre AC als auch an die PLC ankoppeln. Ein vor einigen Jahren überraschend kloniertes neues Mitglied der Sekretin/PTH/Calcitonin-Familie (= Familie B) der GPCR, der PTH2-R, antwortet jedoch nur nach Bindung von PTH bzw. TIP 39, nicht aber nach PTHrP, mit einem intrazellulären cAMP-Signal. Allerdings sind weder hPTH noch TIP39 in der Lage, eine intrazelluläre IP3-Antwort auszulösen. Welche strukturellen Gegebenheiten des PTH2-Rezeptors ermöglichen diese effiziente Ligandendiskriminierung? Analysen der Rezeptor-Liganden-Interaktion und die Aufklärung dieses Komplexes sind ein Schlüsselelement im Design spezifischer Rezeptoragonisten und –antagonisten mit bedeutendem therapeutischen Potential. Eine hochkonservierte Eigenschaft aller Rezeptoren der Familie B der GPCR ist die Lokalisation von sechs extrazellulären Cysteinen, die sowohl zur Expression intakter Rezeptoren von Nöten sind als auch durch mögliche Disulfidbrückenbildung untereinander einen entscheidenden Einfluss auf das Bindungsverhalten ausüben. Die Hypothese der vorliegenden Arbeit ist, dass zwei Cysteine, präsent in der 3. Extrazellulärschleife des PTH2-R, nicht aber in der des PTH1-R, dessen Ligandenspezifität bedingen. Tatsächlich führte das Ausschalten eines entsprechenden Cysteins im Opossum-PTH2-R zu einem exprimierten Rezeptor, der PTHrP zu einem gewissen Grad binden und daraufhin auch den AC/cAMP-Signalweg aktivieren konnte. (184) Es liegt daher die Vermutung nahe, dass diese beiden Cysteine des PTH2-R entweder durch Disulfidbrückenbildung untereinander oder zu den restlichen Cysteinen in der extrazellulären Region die sterische Konfiguration der Rezeptoren und somit auch deren Bindungs- und Signalverhalten ändern können. Auf diesen Ergebnissen und Annahmen basierend, war daher Gegenstand diesen Projekts zunächst das Einfügen verschiedener Punktmutationen in die cDNA des humanen PTH1-R. Es wurden Konstrukte konzipiert zur Einfügung beider Cysteine einzeln (Ala426Cys und Tyr443Cys) oder kombiniert (Ala426Cys/Tyr443Cys). Nach Expression der drei mutierten Rezeptoren und beider Wildtyp-Rezeptoren war Ziel, das Ligandenbindungsverhalten und somit die Expression intakter Rezeptoren an der Zelloberfläche zu untersuchen. Studien des Signalverhaltens bezüglich des AC/cAMP- und des PLC/IP3- Signalwegs, ebenso wie Internalisierungsassays strebten dann die vollständige Charakterisierung der mutierten Rezeptoren an. / Cysteine residues are structurally important for the function of the PTH-1 receptor (PTH1R), probably by forming disulfide bridges. The more recently discovered PTH-2 receptor (PTH2R) differs from the PTH1R by not recognizing PTH-related protein (PTHrP). We hypothesized, that two cystein residues present in the thrid loop of the PTH2R, but not in the PTH1R, might cause this ligand specificity. In fact, eliminating one of the corresponding cysteine residues in the opossum PTH2R resulted in recognition of PTHrP, in contrast to wildtype PTH2R (P Turner et al (1998) J Biol Chem 273: 3830-3837)
12

Análise funcional e estrutural comparativa da fastuosaina com papaína e bromelinas

Cabral, Hamilton [UNESP] 11 August 2005 (has links) (PDF)
Made available in DSpace on 2014-06-11T19:30:54Z (GMT). No. of bitstreams: 0 Previous issue date: 2005-08-11Bitstream added on 2014-06-13T19:40:24Z : No. of bitstreams: 1 cabral_h_dr_sjrp.pdf: 2111647 bytes, checksum: 119e7754b951e76b7b463f93125a12db (MD5) / Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) / As peptidases ou proteases hidrolisam ligações peptídicas. Apesar de todas terem essa característica funcional comum, elas diferem acentuadamente no seu grau de especificidade. O conhecimento da especificidade das cisteíno-peptidase, nos fornece valiosas informações que podem levar a uma melhor compreensão da relação estrutura-função, do papel fisiológico destas enzimas, ou para o desenho de inibidores seletivos. Pela caracterização realizada, a Fastuosaina, uma cisteíno peptidase extraída de frutos verdes de gravatá (Bromelia fastuosa) possui um pH ótimo próximo do neutro, semelhante à Bromelina do talo e do fruto, por enquanto para a Papaína, que possui um pH ótimo de 6,3. Em relação à estabilidade térmica, a Fastuosaina mostrou ser mais resistente à desnaturação, seguida pela Papaína, a Bromelina do fruto e por último a Bromelina do talo. / Peptidases, also known as proteases, hydrolyse peptide bonds with different specificities. Knowing their preferences for cleavage sites, gives valuable informations that can lead to a better understanding of the structure-function relationships, their physiological role, or for design of selective inhibitors. We performed a characterization of Fastuosain, a cystein-peptidase isolated from unripe fruits of gravatá (Bromelia fastuosa), which showed an optimum pH near 7.0, as found also for stem and fruit bromelains. Papain showed a lower value, at pH 6.3. Concerning its thermal stability, Fastuosain showed higher resistance to denaturation, followed by Papain, Fruit and Stem Bromelain.
13

Sulfur-functional polymers for biomedical applications / Schwefel-funktionale Polymere für biomedizinische Anwendungen

Kuhlmann, Matthias January 2015 (has links) (PDF)
Aim of this thesis was to combine the versatility of sulfur-chemistry, regarding redox-sensitivity as well as chemo- and site-specific conjugation, with multifunctionality of poly(glycidol)s as an alternative to poly(ethylene glycol). First the homo- and copolymerizations of EEGE and AGE were performed with respect to molar-mass distribution and reaction kinetics. A detailed study was given, varying the polymerization parameters such as DP, counter ion, solvent and monomer influence. It can be concluded that in general the rates for all polymerizations are higher using K+, in contrast to Cs+, as counter ion for the active alkoxide species. Unfortunately, K+ as counter ion commonly leads to a reduced control over polymer dispersity. In this thesis it was shown that the broad molar-mass distributions might be reduced by adding the monomer in a step-wise manner. In experiments with a syringe pump, for continuously adding the monomer, a significant reduction of the dispersities could be found using K+ as counter ion. In analogy to the oxyanionic polymerization of epoxides, the polymerization of episulfides via a thioanionic mechanism with various DPs was successful with thiols/DBU as initiator. In most experiments bimodality could be observed due to the dimerization, caused by oxidation processes by introduced oxygen during synthesis. Reducing this was successful by modifying the degassing procedure, e.g. repeated degassing cycles after each step, i.e. initiation, monomer addition and quenching. Unfortunately, it was not always possible to completely avoid the dimerization due to oxidation. Thiophenol, butanethiol, mercaptoethanol and dithiothreitol were used as thiol initiators, all being capable to initiate the polymerization. With the prediction and the narrow molar-mass distributions, the living character of the polymerization is therefore indicated. Homo- and copolymers of poly(glycidol) were used to functionalize these polymers with side-chains bearing amines, thiols, carboxylic acids and cysteines. The cysteine side-chains were obtained using a newly synthesized thiol-functional thiazolidine. For this, cysteine was protected using a condensation reaction with acetone yielding a dimethyl-substituted thiazolidine. Protection of the ring-amine was obtained via a mixed-anhydride route using formic acid and acetic anhydride. The carboxylic acid of 2,2-dimethylthiazolidine-4-carboxylic acid was activated with CDI and cysteamine attached. The obtained crystalline mercaptothiazolidine was subjected to thiol-ene click chemistry with allyl-functional poly(glycidol). A systematic comparison of thermal- versus photo-initiation showed a much higher yield and reaction rate for the UV-light mediated thiol-ene synthesis with DMPA as photo-initiator. Hydrolysis of the protected thiazolidine-functionalities was obtained upon heating the samples for 5 d at 70 °C in 0.1 M HCl. Dialysis against acetic acid lead to cysteine-functional poly(glycidol)s, storable as the acetate salt even under non-inert atmosphere. An oxidative TNBSA assay was developed to quantify the cysteine-content without the influence of the thiol-functionality. A cooperation partner coupled C-terminal thioester peptides with the cysteine-functional poly(glycidol)s and showed the good accessibility and reactivity of the cysteines along the backbone. SDS-PAGE, HPLC and MALDI-ToF measurements confirmed the successful coupling. / Ziel der Arbeit war es die Vielseitigkeit der Schwefelchemie, hinsichtlich der Redoxsensitivität und chemo- und seitenspezifischer Konjugation, mit der Funktionalisierbarkeit von Poly(glycidol)en, als multifunktionale PEG-Alternative zu kombinieren. Zunächst wurden die Homo- und Copolymerisationen von EEGE und AGE hinsichtlich der Molmassenverteilung und der Reaktionskinetik untersucht. Durch die Variation der Polymerisationsparameter, wie angestrebter Polymerisationsgrad, Gegenion, Lösungsmittel und Monomer, wurde der Einfluss dieser untersucht. Allgemein konnte gezeigt werden, dass die Polymerisationen schneller ablaufen, wenn K+, im Gegensatz zu Cs+, als Gegenion zum aktiven Alkoxidkettenende verwendet wird. Nachteilig bei der Verwendung von K+ als Gegenion ist der Kontrollverlust der Polymerisation, welcher mit einer Erhöhung der Dispersität einhergeht. Es konnte gezeigt werden, dass die Breite der Molmassenverteilung durch die Geschwindigkeit der Monomerzugabe kontrolliert werden kann. Tatsächlich konnte die Dispersität durch die Verwendung einer Spritzenpumpe verbessert werden, da das Monomer mit einer konstanten angepassten Flussrate hinzugefügt wurde. Analog zur oxyanionischen Polymerisation von Epoxiden, war die Polymerisation von Episulfiden mittels thioanionischer Polymerisation ebenfalls möglich. Hierzu wurden verschiedene Polymerisationsgrade von EETGE und ATGE angestrebt und mittels Thiol/DBU als Initiator auch erreicht. In den meisten Fällen war jedoch eine Dimerisierung der Polymere zu beobachten, welche durch die Oxidation der aktiven Thiolatspezies verursacht wurde. Eine Möglichkeit zur Dimerisierungsunterdrückung war die wiederholte Durchführung von Entgasungszyklen nach jedem Arbeitsschritt, z.B. nach Zugabe des Initiators, des Monomers oder nach dem Quenchen. Trotz dieses experimentellen Aufwandes konnte nicht immer ein vollständiger Ausschluss der Dimerisierung erreicht werden. Thiophenol, Butanthiol, Mercaptoethanol und Dithiothreitol wurden als Thiolinitiatoren (in Kombination mit DBU) verwendet und waren alle in der Lage die Polymerisation zu starten. Die Kontrolle des Polymerisationsgrades und die enge Molmassenverteilung der Polymere verdeutlichen, dass die thioanionische Polymerisation ebenfalls lebend verläuft. Glycidol Homo- und Copolymere wurden verwendet und die Seitenketten mit Amin-, Thiol-, Carbonsäure- und Cysteingruppen funktionalisiert. Die Cysteinseitenketten wurden durch ein neues thiolfunktionales Thiazolidin erhalten. Ausgehend von Cystein und Aceton wurde zunächst das Dimethyl-substituierte Thiazolidin erhalten, welches daraufhin am Ring-Amin mit Essigsäureanhydrid und Ameisensäure formyliert wurde. Die Carbonsäurefunktion des Thiazolidins wurde mittels CDI aktiviert und anschließend mit Cysteamin umgesetzt. Hierbei bildete sich das niedermolekulare kristalline thiolfunktionale Thiazolidin, welches mittels Thiol-En-Click Chemie an allyl-funktionales Poly(glycidol) geknüpft werden konnte. Eine systematische Untersuchungen der thermischen und UV-induzierten Thiol-En-Click Chemie zeigte, dass wesentlich höhere Umsätze und Geschwindigkeiten bei der photoinduzierten Reaktion erhalten werden. Mittels 0.1 M HCl konnte bei 70 °C innerhalb von 5 d die Hydrolyse der Thiazolidine im Anschluss erreicht werden. Nach der anschließenden Dialyse der Polymere gegen 0.1 M Essigsäure wurde erfolgreich das Acetatsalz der cysteine-funktionalen Poly(glycidol)e erhalten. Diese waren hinsichtlich der Thioloxidation unter atmosphärischen Bedingungen stabil. Ein oxidativer TNSBA-Assay wurde entwickelt, um die Menge der Cysteine zu quantifizieren und gleichzeitig den störenden Einfluss der Thiole zu unterbinden. Ein Kooperationspartner setzte die cysteinfunktionalisierten Poly(glycidol)e mit C-terminalen Thioestern um und konnte die gute Zugänglichkeit und Aktivität der Cysteine entlang des Polymerrückgrats nachweisen. SDS-PAGE, HPLC und MALDI-ToF Messungen bestätigten die erfolgreiche Konjugation im Anschluss.
14

Role of N-glycans and cysteine residues in the assembly of homotrimeric P2X 1 receptors

Aschrafi, Sepandarmaz. Unknown Date (has links)
University, Diss., 2002--Frankfurt (Main).
15

Papel das proteases na erosão dentinária / The role of proteases on dental erosion

Zarella, Bruno Lara 22 February 2017 (has links)
Na dentina, a matriz orgânica desmineralizada tem um papel protetor contra desafios erosivos subsequentes. Porém, essa camada pode ser degradada por proteases, como as metaloproteinases da matriz (MMPs) e cisteína catepsinas (CCs). Recentemente, o uso de inibidores de proteases da matriz surgiu como uma importante ferramenta preventiva contra a erosão dentinária. Entretanto, o(s) mecanismo(s) exato(s) pelo(s) qual(is) os inibidores de proteases podem prevenir a erosão dentinária, bem como os tipos de proteases mais envolvidas neste processo ainda não são completamente conhecidos. O projeto foi desenvolvido em 2 subprojetos, com os seguintes objetivos: A)Subprojeto 1:Avaliar o papel das proteases na progressão da erosão dentária; B)subprojeto 2: Testar o potencial inibitório do NaF em CCs dentinárias. Para cumprir esses objetivos, foram utilizadas dentina de terceiros molares humanos para a preparação dos espécimes. A)Subprojeto1:Blocos de dentina (4 X 4 x 2 mm) (n=119) foram obtidos de raízes. Os espécimes foram divididos em 7 grupos de acordo com o seu tratamento (E-64, inibidor especifico II de catepsinas B, clorexidina, galardina NaF, placebo) ou sem tratamento, géis foram aplicados uma única vez sobre a superfície e feito o desafio erosivo (90s, 4x por dia por 5 dias) e feita analise perfilométrica. Os espécimes foram incubadas em solução contendo colagenase de Clostridium histolyticum tipo VII por 96hrs e então feita uma segunda analise perfilometrica para se determinar a espessura da MOD. Dois espécimes foram separados para análise de microscopia eletrônica de varredura. B)Subprojeto 2: Palitos de dentina (6 mm X 2 mm X 1 mm) (n=60) foram cortados da porção médio coronária dos dentes e completamente desmineralizados por imersão em EDTA 0,5 M (pH7,4) por 30 dias e lavados em água deionizada sob constante agitação a 4ºC por 72 h. Os espécimes foram divididos em 6 grupos (E-64, NaF e controle negativo, pH 5,5 ou 7,2) e incubados em saliva artificial contendo seus respectivos inibidores por 24 h 7 dias e 21 dias; ao termino de cada período, os espécimes eram pesados para avaliar a perda de massa e analisada a presença de CTX. A)Subprojeto 1: a perda de tecido desmineralizado (m, média± SD) foi: CHX 8,4±1,7b, Gala 8,6±1,9b, IECB 9,6±1,4a, E64 9,9±1,3a, NaF 9,9±1,7a, P 10,9±2,2a, ST 11,0±1,5a. A perda de tecido mineralizado foi: CHX 15,4±2,2b, Gala 16,0±1,8b, IECB 17,6±2,4a, E64 17,6±2,0a, NaF 17,3±2,8a, P 19,1±2,1a, ST 18,9±2,4a. Os inibidores de MMP reduziu significativamente a perda de matriz orgânica e tecido mineralizado em comparação com os outros grupos (p<0,05). Não foi achada diferença significante entre a espessura da matriz orgânica desmineralizada remanescente (p=0,845). B)Subprojeto 2: Na perda de massa houve diferença significante em relação ao inibidor (F=20,047, p<0,0001) e tempo de incubação (F=222,462, p<0,0001) com significante interação entre esses critérios, nos período de menor tempo de incubação, a perda foi similar para todos os grupos testados, no período de maior tempo de incubação, o grupo contendo NaF demostrou os melhores resultados. Na analise de CTX, houve diferença significante em relação aos inibidores (F46,543, p<0,0001), pH (F=14,836, p<0,0004) e tempo de incubação (F=161,438, p<0,0001) com significante interação entre esses critérios, como ocorrido na perda de massa, não houve diferença estatística nos períodos de menor incubação. No período de maior tempo de incubação, mais uma vez o grupo NaF mostrou os melhores resultados. No valor acumulado de CTX, os grupos E64 e controle negativo tiveram os maiores valores de CTX acumulado, o grupo NaF, independente do pH mostrou redução significante em relação aos demais grupos. Após analise dos resultados dos dois subprojetos, podemos indicar que as MMPs são as proteases de maior importância na progressão da erosão dentinária, assim, sua inibição é de maior importância para a redução desta patologia. Mesmo as CCs não exercendo papel direto para a progressão da erosão, elas são efetivas na cascata da ativação de outras proteases, como as próprias MMPs. Com isso, sua inibição também pode ser importante para a redução indireta da progressão da erosão. Neste presente estudo, pudemos comprovar que o NaF tem potencial inibitório sobre as CCs dentinárias, assim, sugerindo um novo inbidor de CCs. Com os resultados deste estudo, podemos afirmar que as MMPs são as principais proteases na progressão da erosão dentinária e que o NaF tem potencial inibitório nas CCs dentinárias. / In the dentine, the demineralized organic matrix has a protector part against the following erosive challenges. Nevertheless, this layer can be degraded by proteases, like the matrix metalloproteinases (MMPS) and cystein cathepsins (CCs). Recently, the use of proteases of the matrix´s inhibitors, emerged as an important preventive tool against the dentinária erosion. However, the exact mechanisms from which the inhibitors of the proteases may prevent the dentin erosion, as much as the kinds of proteases more involved in this process are not completely known yet. Therefore, the general objective of this project was to investigate the part of the two main proteases of the matrix (MMPs and CCs) in the dental erosion. The project was developed in 2 subprojects, with the following objectives: A)Subproject 1: Evaluate the part of the proteases in the progression of the dental erosion; B)subproject 2: To test the NaF inhibitory potencial in the dentin CCs. To accomplish these objectives, human third molar dentin were used for the preparation of the specimens, obtained in the surgery and urgency clinics of FOB-USP (subproject 1) or granted by the University of Oulu (subproject 2). A) Subproject 1: Dentine blocks 4 X 4 X 2 mm) (n=119) were obtained from the roots of the obtained teeth. The specimens were divided in 7 groups according with their treatment. Gels containing inhibitors (E-64, specific cathepsin B inhibitor II, chlorhexidine, galardin NaF, placebo), or without treatment, were produced, applied only one time over the surface and made the erosive challenge (90s, 4x a day for 5 days) and made profilometric analysis. The specimens were incubated in a solution containing collagenase of Clostridium histolyticum type VII for 96 hours and then a second profilometric analysis was made to determine the thickness of the MOD. Two specimens were separated for the electronic microscopy scan analysis. B) Subproject 2: Dentine sticks (6 mm X 2 mm X 1 mm) (n=60) were cut from the medium coronary portion of the teeth and completely demineralized by immersion in EDTA 0,5 M (pH7,4) ifor 30 days and washed in deionized water under constant agitation in 4º C for 72 hours. The specimens were divided in 6 groups (divided by inhibitors: E-64, NaF and negative control, pH 5,5 or 7,2) and incubated in artificial saliva containing their respective inhibitors for 24 hours, 7 days and 21 days; by the end of each period, the specimens were weighted to evaluate the loss of mass and analised the presence of CTX. A)Subproject 1: the loss of demineralized tissue (m, média± SD) was : CHX 8,4±1,7b, Gala 8,6±1,9b, IECB 9,6±1,4a, E64 9,9±1,3a, NaF 9,9±1,7a, P 10,9±2,2a, ST 11,0±1,5a. The loss of demineralized tissue was: CHX 15,4±2,2b, Gala 16,0±1,8b, IECB 17,6±2,4a, E64 17,6±2,0a, NaF 17,3±2,8a, P 19,1±2,1a, ST 18,9±2,4a. The MMP inhibitors reduced significantly the loss of organic matrix and demineralized tissue in comparison with other groups (p<0,05). There was no significant difference found between the thickness of the remaining demineralized organic matrix.(p=0,845). B)Subproject: In the loss of mass, there was a significant difference in relation to the inhibitor (F=20,047, p<0,0001) and incubation time (F=222,462, p<0,0001) with significant interaction between these criteria, in the periods of lesser time of incubation, the loss was similar for all the tested groups, in the period of higher time of incubation, the group containing NaF demonstrated the best results. In the analysis of CTX, there was significant difference in relation the inhibitors (F46,543, p<0,0001), pH (F=14,836, p<0,0004) and time of incubation (F=161,438, p<0,0001)with significant interaction between these criteria, as occurred in the mass loss, there was no statistic difference in the period of lesser incubation. In the period of higher time of incubation, once again, the NaF group demonstrated the best results. The CTX accumulated value, the E64 groups and negative control had the greater accumulated values of CTX, the NaF group, regardlessof the pH, demonstrated significant reduction in relation to the other groups. After the analysisof the results of both subprojects, we can indicate that the MMPs are the proteases of greater importance in the progression of the dentin erosion, thus, its inhibition is of graeter importance for the reduction of this pathology. Even the CCs don´t playing the part directly for the progression of erosion, they are effective in the cascade of the activation of other proteases, like the MMPs themselves. In this manner, its inhibition can also be important for the indirect reduction of the progression of the erosion. In this present study, we can prove that the NaF has inhibiting potential over the dentin CCs, thus, suggesting a new inhibitor of CCs. With the results of this study, we can affirm that the MMPs are the main proteases in the progression of the dentin erosion and that the NaF has inhibiting potential in the dentin CCs.
16

Post-translational regulation and evolution of plant gamma-glutamate cysteine ligase

Gromes, Roland. January 2007 (has links)
Heidelberg, Univ., Diss., 2007. / Online publiziert: 2008.
17

Inter-molekulare Lokalisation der ATP-Bindungstasche in P2X-Rezeptoren durch Disulfid-Quervernetzung Cystein-substituierter Aminosäuren

Marquez-Klaka, Benjamin. Unknown Date (has links) (PDF)
Universiẗat, Diss., 2008--Frankfurt (Main).
18

Papel das proteases na erosão dentinária / The role of proteases on dental erosion

Bruno Lara Zarella 22 February 2017 (has links)
Na dentina, a matriz orgânica desmineralizada tem um papel protetor contra desafios erosivos subsequentes. Porém, essa camada pode ser degradada por proteases, como as metaloproteinases da matriz (MMPs) e cisteína catepsinas (CCs). Recentemente, o uso de inibidores de proteases da matriz surgiu como uma importante ferramenta preventiva contra a erosão dentinária. Entretanto, o(s) mecanismo(s) exato(s) pelo(s) qual(is) os inibidores de proteases podem prevenir a erosão dentinária, bem como os tipos de proteases mais envolvidas neste processo ainda não são completamente conhecidos. O projeto foi desenvolvido em 2 subprojetos, com os seguintes objetivos: A)Subprojeto 1:Avaliar o papel das proteases na progressão da erosão dentária; B)subprojeto 2: Testar o potencial inibitório do NaF em CCs dentinárias. Para cumprir esses objetivos, foram utilizadas dentina de terceiros molares humanos para a preparação dos espécimes. A)Subprojeto1:Blocos de dentina (4 X 4 x 2 mm) (n=119) foram obtidos de raízes. Os espécimes foram divididos em 7 grupos de acordo com o seu tratamento (E-64, inibidor especifico II de catepsinas B, clorexidina, galardina NaF, placebo) ou sem tratamento, géis foram aplicados uma única vez sobre a superfície e feito o desafio erosivo (90s, 4x por dia por 5 dias) e feita analise perfilométrica. Os espécimes foram incubadas em solução contendo colagenase de Clostridium histolyticum tipo VII por 96hrs e então feita uma segunda analise perfilometrica para se determinar a espessura da MOD. Dois espécimes foram separados para análise de microscopia eletrônica de varredura. B)Subprojeto 2: Palitos de dentina (6 mm X 2 mm X 1 mm) (n=60) foram cortados da porção médio coronária dos dentes e completamente desmineralizados por imersão em EDTA 0,5 M (pH7,4) por 30 dias e lavados em água deionizada sob constante agitação a 4ºC por 72 h. Os espécimes foram divididos em 6 grupos (E-64, NaF e controle negativo, pH 5,5 ou 7,2) e incubados em saliva artificial contendo seus respectivos inibidores por 24 h 7 dias e 21 dias; ao termino de cada período, os espécimes eram pesados para avaliar a perda de massa e analisada a presença de CTX. A)Subprojeto 1: a perda de tecido desmineralizado (m, média± SD) foi: CHX 8,4±1,7b, Gala 8,6±1,9b, IECB 9,6±1,4a, E64 9,9±1,3a, NaF 9,9±1,7a, P 10,9±2,2a, ST 11,0±1,5a. A perda de tecido mineralizado foi: CHX 15,4±2,2b, Gala 16,0±1,8b, IECB 17,6±2,4a, E64 17,6±2,0a, NaF 17,3±2,8a, P 19,1±2,1a, ST 18,9±2,4a. Os inibidores de MMP reduziu significativamente a perda de matriz orgânica e tecido mineralizado em comparação com os outros grupos (p<0,05). Não foi achada diferença significante entre a espessura da matriz orgânica desmineralizada remanescente (p=0,845). B)Subprojeto 2: Na perda de massa houve diferença significante em relação ao inibidor (F=20,047, p<0,0001) e tempo de incubação (F=222,462, p<0,0001) com significante interação entre esses critérios, nos período de menor tempo de incubação, a perda foi similar para todos os grupos testados, no período de maior tempo de incubação, o grupo contendo NaF demostrou os melhores resultados. Na analise de CTX, houve diferença significante em relação aos inibidores (F46,543, p<0,0001), pH (F=14,836, p<0,0004) e tempo de incubação (F=161,438, p<0,0001) com significante interação entre esses critérios, como ocorrido na perda de massa, não houve diferença estatística nos períodos de menor incubação. No período de maior tempo de incubação, mais uma vez o grupo NaF mostrou os melhores resultados. No valor acumulado de CTX, os grupos E64 e controle negativo tiveram os maiores valores de CTX acumulado, o grupo NaF, independente do pH mostrou redução significante em relação aos demais grupos. Após analise dos resultados dos dois subprojetos, podemos indicar que as MMPs são as proteases de maior importância na progressão da erosão dentinária, assim, sua inibição é de maior importância para a redução desta patologia. Mesmo as CCs não exercendo papel direto para a progressão da erosão, elas são efetivas na cascata da ativação de outras proteases, como as próprias MMPs. Com isso, sua inibição também pode ser importante para a redução indireta da progressão da erosão. Neste presente estudo, pudemos comprovar que o NaF tem potencial inibitório sobre as CCs dentinárias, assim, sugerindo um novo inbidor de CCs. Com os resultados deste estudo, podemos afirmar que as MMPs são as principais proteases na progressão da erosão dentinária e que o NaF tem potencial inibitório nas CCs dentinárias. / In the dentine, the demineralized organic matrix has a protector part against the following erosive challenges. Nevertheless, this layer can be degraded by proteases, like the matrix metalloproteinases (MMPS) and cystein cathepsins (CCs). Recently, the use of proteases of the matrix´s inhibitors, emerged as an important preventive tool against the dentinária erosion. However, the exact mechanisms from which the inhibitors of the proteases may prevent the dentin erosion, as much as the kinds of proteases more involved in this process are not completely known yet. Therefore, the general objective of this project was to investigate the part of the two main proteases of the matrix (MMPs and CCs) in the dental erosion. The project was developed in 2 subprojects, with the following objectives: A)Subproject 1: Evaluate the part of the proteases in the progression of the dental erosion; B)subproject 2: To test the NaF inhibitory potencial in the dentin CCs. To accomplish these objectives, human third molar dentin were used for the preparation of the specimens, obtained in the surgery and urgency clinics of FOB-USP (subproject 1) or granted by the University of Oulu (subproject 2). A) Subproject 1: Dentine blocks 4 X 4 X 2 mm) (n=119) were obtained from the roots of the obtained teeth. The specimens were divided in 7 groups according with their treatment. Gels containing inhibitors (E-64, specific cathepsin B inhibitor II, chlorhexidine, galardin NaF, placebo), or without treatment, were produced, applied only one time over the surface and made the erosive challenge (90s, 4x a day for 5 days) and made profilometric analysis. The specimens were incubated in a solution containing collagenase of Clostridium histolyticum type VII for 96 hours and then a second profilometric analysis was made to determine the thickness of the MOD. Two specimens were separated for the electronic microscopy scan analysis. B) Subproject 2: Dentine sticks (6 mm X 2 mm X 1 mm) (n=60) were cut from the medium coronary portion of the teeth and completely demineralized by immersion in EDTA 0,5 M (pH7,4) ifor 30 days and washed in deionized water under constant agitation in 4º C for 72 hours. The specimens were divided in 6 groups (divided by inhibitors: E-64, NaF and negative control, pH 5,5 or 7,2) and incubated in artificial saliva containing their respective inhibitors for 24 hours, 7 days and 21 days; by the end of each period, the specimens were weighted to evaluate the loss of mass and analised the presence of CTX. A)Subproject 1: the loss of demineralized tissue (m, média± SD) was : CHX 8,4±1,7b, Gala 8,6±1,9b, IECB 9,6±1,4a, E64 9,9±1,3a, NaF 9,9±1,7a, P 10,9±2,2a, ST 11,0±1,5a. The loss of demineralized tissue was: CHX 15,4±2,2b, Gala 16,0±1,8b, IECB 17,6±2,4a, E64 17,6±2,0a, NaF 17,3±2,8a, P 19,1±2,1a, ST 18,9±2,4a. The MMP inhibitors reduced significantly the loss of organic matrix and demineralized tissue in comparison with other groups (p<0,05). There was no significant difference found between the thickness of the remaining demineralized organic matrix.(p=0,845). B)Subproject: In the loss of mass, there was a significant difference in relation to the inhibitor (F=20,047, p<0,0001) and incubation time (F=222,462, p<0,0001) with significant interaction between these criteria, in the periods of lesser time of incubation, the loss was similar for all the tested groups, in the period of higher time of incubation, the group containing NaF demonstrated the best results. In the analysis of CTX, there was significant difference in relation the inhibitors (F46,543, p<0,0001), pH (F=14,836, p<0,0004) and time of incubation (F=161,438, p<0,0001)with significant interaction between these criteria, as occurred in the mass loss, there was no statistic difference in the period of lesser incubation. In the period of higher time of incubation, once again, the NaF group demonstrated the best results. The CTX accumulated value, the E64 groups and negative control had the greater accumulated values of CTX, the NaF group, regardlessof the pH, demonstrated significant reduction in relation to the other groups. After the analysisof the results of both subprojects, we can indicate that the MMPs are the proteases of greater importance in the progression of the dentin erosion, thus, its inhibition is of graeter importance for the reduction of this pathology. Even the CCs don´t playing the part directly for the progression of erosion, they are effective in the cascade of the activation of other proteases, like the MMPs themselves. In this manner, its inhibition can also be important for the indirect reduction of the progression of the erosion. In this present study, we can prove that the NaF has inhibiting potential over the dentin CCs, thus, suggesting a new inhibitor of CCs. With the results of this study, we can affirm that the MMPs are the main proteases in the progression of the dentin erosion and that the NaF has inhibiting potential in the dentin CCs.
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Molekulargenetische und biochemische Untersuchungen zur Funktion und Struktur des Enzym IIMtl aus Escherichia coli K-12

Turgut, Sevket 25 February 2004 (has links)
Das E. coli EIIMtl gehört zu den PTSs (PEP-abhängiges Kohlenhydrat : Phosphotransferasesystem) und katalysiert den gekoppelten Transport von D-Mannitol in die Zelle. Es lässt sich in drei funktionelle Domänen unterteilen. Die membranüberspannende EIIC-Domäne mit der Substratbindestelle und der Transporterfunktion und die für die Übertragung der Phosphorylgruppe essentiellen hydrophilen Domänen EIIB und EIIA. Die exakte Topologie der EIIC-Domäne und deren Funktion bei Transport und Phosphorylierung sind bisher noch unklar. Zur Untersuchung der Funktion wurden Selektionssysteme konstruiert, um Mutanten aus Escherichia coli K-12 zu isolieren und charakterisieren, in denen der Transport von der Phosphorylierung entkoppelt ist. Diese Mutationen (E218A, E218V und H256P) wurden alle in der stark konservierten Schleife 5 des membrangebundenen Transporters EIIC gefunden, zwei davon in dem dort befindlichen GIH256E-Motiv. Die Suche nach Suppressormutationen ergab ebenfalls Mutationen in der Aminosäure 256 des GIHE-Motivs (P256A, P256Q und P256S). Die Kombination der verschiedenen Mutationen durch ortspezifische Mutagenese ergab unterschiedliche Effekte auf den Transport und der Phosphorylierung von D-Mannitol (Otte, S., Scholle, A., Turgut, S., and Lengeler, J.W. 2003. Mutations Which Uncouple Transport and Phosphorylation in the D-Mannitol Phosphotransferase System of Escherichia coli K-12 and Klebsiella pneumoniae 1033-5P14. J. Bacteriol. 185(7): 2267-2276). Bei der Untersuchung der Sekundärstruktur wurde die Lokalisation verschiedener Aminosäuren im EIIMtl durch die Methode des Cystein-Scanning überprüft. Mit Hilfe weiterer Sequenzuntersuchungen und unter Berücksichtigung weiterer Ergebnisse, konnte ein alternatives Sekundärstrukturmodell des EIICMtl vorgestellt werden, bei dem die Schleife 5 in die Membran gelegt wurde.
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Úloha reaktivních cysteinů v aktivaci lidského TRPA1 iontového kanálu / Role of reactive cysteines in the activation of the human TRPA1 ion channel

Synytsya, Viktor January 2016 (has links)
TRPA1 is a thermosensitive ion channel from the family of TRP (transient receptor potential) receptors. In primary sensory neurons, TRPA1 is an important transducer of painful stimuli, where it contributes to detection of noxious, irritant and inflammatory compounds of endogenous and exogenous origin. The major activation mode of TRPA1 is covalent modification of N-terminal cysteines or lysines by electrophilic compounds. The potency of the electrophilic agonists is increased by voltage dependency of the TRPA1 channel, which contributes substantially during membrane depolarization. To date, the role of several cysteine residues in the N- terminus has been demonstrated. However, the functional role of six cysteines in the transmembrane domain is still unknown. The first part of the thesis focuses on the functional role of the transmembrane cysteines in the activation of human TRPA1 channel. Our results indicate that these sites do not mediate reactive-electrophile-induced activation but four of the six cysteines substantially contribute to voltage-dependent gating of the channel and two participate in calcium-dependent modulation of TRPA1. In the second part of this thesis we aim to explore the proximity of two specific charged residues, located in the linker between the fourth and the fifth...

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