A fixação de N2 é uma fonte importante de nitrogênio novo nos ciclos biogeoquímicos, realizado potencialmente por cianobactérias diazotróficas, principalmente em condições de limitação de nitrogênio. O canal de São Sebastião (CSS) é reconhecidamente meso-oligotrófico, porém, eventos episódicos de precipitação podem alterar as concentrações de nutrientes locais interferindo na ocorrência de diazotróficas. Este trabalho investigou o efeito do aumento da pluviosidade na ocorrência e coexistência de diazotróficas no CSS e na baía do Araçá (BA), em 9 cenários distintos. As diazotróficas Trichodesmium spp. e Richelia intracellularis ocorreram após o aumento da pluviosidade nos dois pontos, não co-existindo em dois eventos. R. intracellularis ocorreu somente em endossimbiose com diatomáceas do gênero Hemiaulus, com predomínio em H. membranaceus. Os ventos de SW no CSS indicaram relações diretas na ocorrência das diazotróficas, sugerindo advecção de células provindas de outros locais. A temperatura e o fosfato apresentaram relações significativas com a ocorrência das diazotróficas. As densidades de diazotróficas e da comunidade fitoplanctônica foram maiores na BA em todos os eventos, assim como as concentrações de clorofila-a e nutrientes, ressaltando a importância da interação das águas da BA com o CSS. / The biological nitrogen fixation adds new nitrogen into the biogeochemical cycle. This process is attributed to diazothrophic cyanobacteria, which are known to occur in environments with nitrogen limitation. Although the São Sebastião Channel (CSS) is a meso-oligothrophic environment, local rain can affect nutrients concentrations, hence the occurrence of diazothrophic species. This work addressed how the increase in the precipitation rate alters the occurrence and co-existence of diazothrophic cyanobacteria in nine scenarios in the CSS and Araçá Bay (BA). The diazothrophic species Trichodesmium spp. and Richelia intracellularis occurred after an increase in rainfall, co-occurring in 7 of the 9 scenarios. Richelia intracellularis was always associated symbiotically with Hemiaulus diatoms, specially H. membranaceus. The occurrence of diazothrophic species was highly correlated to intense SW winds, suggesting the allochthonous input of cells in the CSS. The diazothrophic species occurrence was also associated with variations in temperature and phosphate concentration. The abundance of both diazothrophic species and phytoplankton community were higher in the BA in every scenario. The nutrients and chlorophyll-a concentrations were higher in the BA, highlighting the importance of water transport between BA and CSS.

Marine diatoms are the dominant primary producers in coastal and shelf regions, and contribute to about 20% of the annual photosynthesis on Earth. Diatoms also exert a major control on the marine silicon (Si) cycle through the formation of biogenic silica (bSiO2). Continental shelves account for half of the total marine area in the Arctic, yet our knowledge of the cycling of Si for this critically climate-impacted region is limited. The overall objective of this thesis was to improve our understanding of marine bSiO2 dynamics and Si cycling in marine Arctic and Subarctic ecosystems using novel techniques. Phytoplankton and nutrient observations, including dissolved and particulate silica concentrations, are presented from a period of ten years within five biological ‘hotspots’ in the Bering and Chukchi Seas. The first measurements of bSiO2 production and dissolution rates are also presented from a period of four years at the same sites. Results from this work show that (i) although interannual variability is high, diatoms are responsible for most of the high primary productivity in the Bering and Chukchi Seas, (ii) bSiO2 is primarily re-dissolved within the euphotic zone rather than exported, and (iii) phytoplankton phenology and marine Si cycling are affected by short-term climatic changes in this region. We also present the first measurements of bSiO2 production rates along a transect from the Canadian Arctic Archipelago (CAA), through Baffin Bay and into the Labrador Sea. We show that diatoms are both abundant and productive throughout these regions in summer, despite widespread Si limitation in the low-nutrient surface waters. Finally, we also investigated the natural variations in the Si isotopic composition of silicic acid (30Si(OH)4). On a transect through the Bering and Chukchi Seas, Canada Basin and CAA, and finally to Baffin Bay and the Labrador Sea, we found that δ30Si(OH)4 signals reflect water mass composition, the dissolution of bSiO2 throughout the water column, and the biological utilization of Si in surface waters. Ultimately, this work provides insight into the processes controlling marine Si cycling within the Arctic and its links to the global marine Si cycle and other biogeochemical cycles. / Graduate / 2020-03-13

La banquise Antarctique joue un rôle important sur les flux de chaleur et les échanges de gaz à l'interface océan-atmosphère, sur la circulation océanique globale, sur l'albédo et la productivité primaire de l'Océan Austral. Cependant, du fait de son éloignement et d'un climat extrême, cette région reste à ce jour encore peu étudiés, et représente un verrou pour les modèles prédictifs du climat. De plus, de récentes observations ont montré que le continent Antarctique présente des tendances régionales, dont les causes et les mécanismes sont encore mal compris. Les reconstructions paléoclimatiques de températures tendent à montrer que ces disparités régionales ont également caractérisé la période Holocène. L'Holocène tardif représente la période sur laquelle le réchauffement récent se produit et est également caractérisée par des variations climatiques rapides généralement de plus faibles amplitudes. Afin de mieux évaluer ces changements, l'étude fine des conditions environnementales passées en Antarctique au cours de l'Holocène tardif est essentielle afin d'isoler la part de variabilité climatique naturelle de la part anthropique. Bien qu'un vaste réseau de carottes de glace en Antarctique constitue une base d'informations robuste sur la variabilité atmosphérique passée dans l'Hémisphère Sud, l'étude des conditions paléocéanographiques est contrainte dans la région par le nombre limité d'enregistrements sédimentaires marins,et qui de plus, tendent à être de faible résolution, trop courts ou discontinus. Notre étude porte sur la zone marginale du plateau de la Terre Adélie-Georges V en Antarctique de l'Est, qui a reçu peu d'attention jusqu'à présent, malgré la présence de séquences sédimentaires très épaisses et laminées, permettant la reconstruction fine des variations climatiques passées. Nos travaux ont été réalisés à partir de plusieurs enregistrements sédimentaires marins, couvrant la période instrumentale et jusqu'aux deux derniers millénaires. Nos résultats montrent que les assemblages de diatomées, les biomarqueurs spécifiques des diatomées, ainsi que de la géochimie élémentaire du sédiment traduisent efficacement des variations océanographiques et climatiques locales et aussi régionales à l'échelle interannuelle à centennale. La dynamique couplée océan-atmosphère en lien avec les modes climatiques principaux de l'Hémisphère Sud, ainsi que la dynamique glaciaire constituent les mécanismes de forçage majeurs des changements du couvert de banquise au court de l'Holocène tardif. / Antarctic sea ice has large impacts on the heat and gas transfers between the ocean andthe atmosphere, on the global oceanic circulation, on the Earth albedo and on theprimary productivity of the Southern Ocean. However, because of its remote and icecoveredlocation, the climate of the Antarctic continent and of the Southern Ocean isstill poorly studied and constitutes a challenge for climate model predictions. Recentobservations highlighted opposite patterns of climate variability between Western andEastern Antarctica, but poorly resolved the mechanisms and forcing involved.Reconstructions of temperature signals indicate that regional disparities have persistedover the Holocene period. The Late Holocene period includes the recent climate change(so-called modern global warming) as well as preceding rapid climate variabilitiesthough of lower amplitude. Achieving paleoenvironmental reconstructions in theAntarctic region at high temporal resolution over this period therefore offers theopportunity to improve the understanding of climate changes in response to bothnatural and anthropogenic forcing. While paleoenvironmental records obtained from icecores provide robust information on the past atmospheric conditions over Antarctica,the paleoceanography of the nearby ocean is constrained by a limited set of rather lowresolution, discontinuous records from sediment cores. Our study focuses on themarginal zone of the Adélie-Georges V Land, East Antarctica, a region which has beenpoorly studied so far, despite the presence of thick and laminated sedimentary depositsthat allow accurate and high resolution paleoclimate reconstructions. Our work is basedon several marine sedimentary records, made of diatom oozes and covering theinstrumental period to the last 2,000 years. Our results show that diatom assemblages,diatom specific biomarkers (HBI) and elemental geochemistry in the sedimenteffectively testify of local but also regional oceanographic and climatic variations atdecadal to centennial scales. Coupled atmospheric and oceanic dynamics linked to majorclimate modes of the Southern Hemisphere, along with glacial dynamics constitutemajor forcing mechanisms of ice covered changes during the late Holocene.

La Réunion est une île volcanique du Sud-Ouest de l’Océan Indien, située à 800 km à l’Est de Madagascar et appartenant à l’archipel des Mascareignes, avec Maurice et Rodrigues. Ce territoire est un département français d’outremer et par conséquent les lois européennes sur la qualité des eaux des cours d’eau s’y appliquent. La chimie de l’eau n’étant pas suffisante pour surveiller la qualité des eaux, les bio-indicateurs peuvent compléter le diagnostic. Dans cette thèse, les diatomées ont été choisies pour évaluer la qualité des eaux courantes. Les diatomées de La Réunion ne sont connues que par des articles épars avec la description de nouvelles espèces. Pendant quatre ans, six campagnes de prélèvements ont été menées sur les rivières pérennes. Ce travail a permis d’acquérir des connaissances sur la flore diatomique épilithique des cours d’eau pérennes de La Réunion et par conséquent sur la biodiversité de ces milieux. De plus, l’écologie des diatomées a été étudiée statistiquement, avec les arbres de régression multivariable (ARM), l’IndVal et ses extensions et les moyennes pondérées, ce qui a permis d’acquérir des connaissances sur l’écologie des communautés, l’autoécologie des espèces et donc sur la qualité de l’eau des rivières. Les résultats intégrés de cette thèse ainsi que les travaux réalisés dans le cadre d’une collaboration avec l’Irstea, ont abouti à une nouvelle méthode indicielle, l’Indice Diatomique Réunion ou IDR, permettant d’évaluer la qualité écologique des cours d’eau. / The volcanic Réunion Island is situated in the southwest Indian Ocean, 800 km to the east of Madagascar; it belongs to the Mascarene archipelago with Mauritius and Rodrigues. This territory is a French oversea department and therefore follows EU laws rivers water quality. The water chemistry is not enough to monitor the quality of water and bioindicators can complete the diagnosis. In this thesis, diatoms have been choosen to assess the quality of the running waters. The diatoms of Réunion Island are only known through scarce articles with bthe description of new species. During four years, six sampling campaigns were conducted on the perennial rivers. The gain of this work is the knowledge of the epilithic diatom flora of Réunion Island perennial rivers and therefore the biodiversity of these environments. Moreover, the study of the diatom ecology by statistics, like Multivariable regression trees (MRT), IndVal and these extensions, Weighted Average (WA) allows acquire knowledge about their community ecology, their autoecology and accordingly on the quality of the river water. The results included in this thesis as well as the work done in collaboration with Irstea, led to a new index method, the Diatomic Index Réunion or IDR, to assess the ecological quality of rivers.

The distribution pattern of diatoms from lakes and streams of varying salinity in the south-west of Western Australia was investigated. A total of 95 water bodies were sampled and separated into freshwater (<3 ppt), hyposaline (3-20 ppt), mesosaline (20-50 ppt) and hypersaline (>50 ppt). The south-west and specifically the inland wheatbelt region has been severely influenced by secondary salinisation, due to clearing of native vegetation for agriculture. There has been little research on diatom communities from salt-affected systems, with this data providing the basis for the development of an inference model based on species optima and tolerance limits to salinity. Physico-chemical variables measured from the study sites were collated and assessed. Salinity ranged from freshwater (0.04) to hypersaline (156.80 ppt), and pH ranged from acidic (2.90) to alkaline (10.51). Dissolved oxygen levels were recorded from 1.11 to 18.67 mgL-1, water temperature from 6.30 to 28.10 °C and peripheral vegetation scores from 1 (little or no cover) to 5 (dense cover). Analysis of variance (ANOVA) showed that salinities were significantly higher in standing waters located further inland, compared to flowing waters in high rainfall areas. Hypersaline wetlands displayed significantly lower dissolved oxygen levels, higher water temperatures and reduced peripheral vegetation, compared to freshwaters. The pH of hypersaline sites was also significantly lower, associated with surrounding land use or underlying geology. The data collected provides important baseline information, with implications for aquatic biota. / The community structure of diatoms in relation to varying salinity concentration was explored. An artificial substrate collector (JJ periphytometer) was used to standardise sampling and ensure diatom assemblages were representative of ambient water quality. A total of 217 taxa were identified with the highest diversity observed in freshwater sites (up to 33 species), and limited to less than 15 in hypersaline waters. According to BIOENV, salinity was the key factor influencing diatom community structure. SIMPER analysis found a number of discriminating taxa between salinity ranges, specifically between assemblages from freshwater and hypersaline sites. Taxa such as Achnanthidium minutissimum and Gomphonema parvulum were indicative of freshwaters. In comparison, Amphora coffeaeformis and Nitzschia ovalis were associated with hypersaline water bodies. Diatom community structure was also examined from 20 hypersaline wetlands in the wheatbelt region with varying pH. Characteristic taxa including Amphora coffeaeformis, Hantzschia sp. aff. baltica and Nitzschia ovalis showed a wide tolerance to salinity and pH, or hypersaline acidic conditions. BIOENV analysis found there were no observable differences between diatom assemblages in relation to salinities above 50 ppt and that pH was highly correlated to species composition. The increasing occurrence of acid saline lakes is of concern and is most likely attributable to deep drainage practices and continued use of fertilisers in agricultural areas. / A diatom-based transfer function was developed from the south-west dataset, to document species optima and tolerance limits to salinity. CCA analysis showed that salinity accounted for a significant and independent amount of variation in the diatom data enabling an inference model to be derived. The most successful model was generated using tolerance-downweighted weighted averaging, with a high coefficient of determination and low prediction errors that remained high after jackknifing. The optima of freshwater diatoms were similar to those reported from other regions of the world, although the optima of hypersaline species tended to be higher. Comparatively, the model performed very well, with the potential to be applied in future paleolimnological studies. In conclusion, this study has shown diatoms to be effective biomonitoring tools, providing the basis for future sampling strategies that assess the biodiversity of salt-affected water bodies in Western Australia. Potential indicator species from different salinity ranges were identified and the sensitivity of diatoms allowed for the development of a statistically robust inference model for the south-west. The reported optima and tolerance limits of important taxa may be further explored to evaluate the success of remediation measures implemented for secondary salinised systems in this region.

<p>The European Union Water Framework Directive (WFD), with initiatives to manage surface water resources, has increased the need for fast and inexpensive methods for monitoring conditions in streams. The objective of this thesis is to assess the potential of near-infrared spectroscopy (NIRS) of epilithic material to become such method. NIRS, which is a technique that is commonly used in industry for process monitoring and quality control of products, registers the chemical properties of organic material on a molecular level. Epilithic material, i.e. the layer of dead and alive material that covers stone surfaces in streams, is continuously influenced by the stream water that flows over it, and it has the potential to integrate chemical and biological conditions over time. The temporal integration is a significant factor, since conditions in streams can change within hours or days. The thesis consists of two published papers. In the first paper a new sampler for epilithic material, the Stone Brusher, was described and the performance evaluated. The Stone Brusher is designed to take qualitative or semi-quantitative samples of epilithic material from stones at 7–50 cm water depth. The epilithic material is dislodged from the stone surface with a rotating brush enclosed in a chamber, and the material is drawn up directly into the sample bottle with an air-cylinder. The operator takes a sample quickly and without putting hands into the water. The sampler is made of plastic, stainless steel and aluminium and weighs 3.1 kg. It is designed to meet the demand for standardized sampling for research and environmental monitoring and to improve working conditions for sampling personnel. The equipment allows sampling from surfaces of bedrock and large stones that cannot be lifted from the bottom. Using data of near-infrared spectroscopy and diatom analyses, this new sampler was evaluated in comparison to the toothbrush method, a primitive method which is the current standard in EU. The results indicate that the Stone Brusher reduces sampling variability compared with the toothbrush method.</p><p>In the second paper, the Stone Brusher was used to collect epilithic material from 65 sites (42 uncontaminated and 23 contaminated) from streams in the widespread mining area called the Skellefte-district in Västerbotten, northern Sweden, in order to test the hypothesis that impact on the epilithic material caused by emissions from mining and mining-related industries can be detected using NIRS. The epilithic material was filtered onto glass fibre filters, measured by NIRS, and the results were modelled using Principal Component Analysis (PCA). The NIRS approach was evaluated by comparing it with the results of chemical and diatom analyses of the same samples. Based on PCA, the NIRS data distinguished contaminated from uncontaminated sites and performed slightly better than chemical analyses and clearly better than diatom analyses. Of the streams designated a priori as contaminated, 74 % were identified as contaminated by NIRS, 65 % by chemical analysis and 26 % by diatom analysis. Unlike chemical analyses of water or of epilithic material samples, NIRS data reflect biological impacts in the streams. Given that, and the simplicity of NIRS-analyses, further studies to assess the use of NIRS of epilithic material are justified. NIRS has the potential to become a fast method for screening in regions where large numbers of streams occur to find impacted streams or as a routine method for temporal monitoring in selected streams for early detection of environmental impact, similar to process monitoring in industry.</p>

Les concentrations en silice dissoute (DSi) et silice particulaire biogène (BSi) ont été mesurées pendant une année complète (en 2003) dans la zone tidale de la rivière Escaut et dans ses tributaires aux limites tidales. Alors que la DSi est restée, dans les tributaires, à des concentrations élevées toute au long de l’année, et que la BSi s’est maintenue à des concentrations faibles, la DSi a été entièrement consommée pendant l’été dans la rivière tidale et les concentrations en BSi ont augmenté. En comparant ces concentrations avec celles de la biomasse des diatomées et de la matière en suspension, il a pu être estimé que la majeure partie de la BSi en été était associée aux diatomées vivantes. Des bilans de masse de la DSi et de ces deux fractions de BSi ont été effectués sur différentes zones de la rivière tidale pendant la période durant laquelle les diatomées se développent (période productive, Mai à Octobre). Ceci a permis l’estimation de la croissance et de la mortalité des diatomées, ainsi que de la sédimentation nette de la BSi durant cette période : la moitié de la DSi apportée par les rivières a été transformée en BSi dans la rivière tidale, et la rétention de la silice y a atteint un tiers des apports fluviaux en silice “totale” (TSi = DSi + BSi). Les flux annuels de silice ont aussi été calculés pour replacer à une échelle annuelle les résultats obtenus pendant la période productive : les rétentions annuelles de DSi et la de TSi ne s élevèrent respectivement qu’à 14 et 6 %. L’échantillonnage de l’estuaire a été effectué sur l’ensemble du gradient de salinité au cours de 11 campagnes réparties sur trois ans (de 2003 à 2005). Du fait du mélange des eaux douces et marines, les concentrations en DSi diminuèrent toujours de l’amont vers l’aval, mais les profils étaient généralement convexes ou concaves. Ils ont été interprétés en les comparant avec ceux obtenus à l’aide de la modélisation du transport conservatif. Les flux à l’embouchure ont aussi pu être recalculés, ce qui a permis de quantifier la consommation ou le relargage de DSi au sein de l’estuaire : un maximum de consommation a été observé au printemps, mais l’estuaire a été une source nette de DSi d’août à décembre. A l’échelle annuelle, 28 % des apports de DSi à l’estuaire ont été consommés. La comparaison des profils de BSi avec ceux de la biomasse des diatomées et ceux de la matière en suspension indiqua que la plupart de la BSi dans l’estuaire était détritique (c’est-à-dire non associée aux diatomées vivantes). Ces résultats ont été confirmés par des expériences d’incorporation de silice radioactive qui, bien que la méthodologie soit complètement différente, apportèrent des résultats comparables. La dynamique complexe de la BSi a donc pu être interprétée à l’aide de celle déjà bien étudiée de la matière en suspension dans l’estuaire de l’Escaut, et un bilan de masse de la BSi dans l’estuaire a pu être établi à partir d’un bilan pour la matière en suspension obtenu de la littérature. En plus de la production de diatomées, l’estuaire a reçu presque autant de BSi de la rivière tidale que de la zone côtière. Ceci induisit que la rétention de TSi dans l’estuaire (59 %) a été plus importante que celle de la DSi. Au final, le système tidal de l’Escaut apparaît comme un filtre important pour la silice : les rétentions globales de DSi et TSi dans ce système s’élevèrent respectivement à 39 et 61 %. La comparaison des dynamiques de la silice dans la rivière tidale et dans l’estuaire mit en évidence l’importance du rôle de l’estuaire. La consommation de DSi et la déposition de BSi par unité de surface étaient certes plus intenses dans la rivière tidale mais, à l’échelle de l’écosystème, les effets y furent limités du fait de sa faible surface comparée à celle de l’estuaire. L’une des observations les plus importantes de cette étude est celle de l’apport net de BSi à l’estuaire depuis la zone côtière, ce qui induisit une importante rétention estuarienne de la silice. Les différences importantes entre les rétentions de DSi et de TSi mettent ainsi en évidence la nécessité de prendre en compte la dynamique de la BSi dans l’étude de celle de la silice. De plus, l’importance de la BSi détritique implique que la dynamique de la BSi ne peut être étudiée de part l’observation seule de celle des diatomées. Enfin, l’apport net de BSi vers l’estuaire à l’embouchure, ainsi que l’origine en grande partie marine des diatomées se développant dans l’estuaire, soulignent l’importance de prendre en compte l’importance des échanges à l’embouchure pour le fonctionnement biogéochimique de la silice dans l’estuaire ; l’estuaire ne doit pas être vu comme un simple filtre à sens unique des espèces dissoutes et particulaires provenant uniquement des rivières en amont.

Spatial and temporal temperature and moisture patterns across the Tibetan Plateau are very complex. The onset and magnitude of the Holocene climate optimum in the Asian monsoon realm, in particular, is a subject of considerable debate as this time period is often used as an analogue for recent global warming. In the light of contradictory inferences regarding past climate and environmental change on the Tibetan Plateau, I have attempted to explain mismatches in the timing and magnitude of change. Therefore, I analysed the temporal variation of fossil pollen and diatom spectra and the geochemical record from palaeo-ecological records covering different time scales (late Quaternary and the last 200 years) from two core regions in the NE and SE Tibetan Plateau. For interpretation purposes I combined my data with other available palaeo-ecological data to set up corresponding aquatic and terrestrial proxy data sets of two lake pairs and two sets of sites. I focused on the direct comparison of proxies representing lacustrine response to climate signals (e.g., diatoms, ostracods, geochemical record) and proxies representing changes in the terrestrial environment (i.e., terrestrial pollen), in order to asses whether the lake and its catchments respond at similar times and magnitudes to environmental changes. Therefore, I introduced the established numerical technique procrustes rotation as a new approach in palaeoecology to quantitatively compare raw data of any two sedimentary records of interest in order to assess their degree of concordance. Focusing on the late Quaternary, sediment cores from two lakes (Kuhai Lake 35.3°N; 99.2°E; 4150 m asl; and Koucha Lake 34.0°N; 97.2°E; 4540 m asl) on the semi-arid northeastern Tibetan Plateau were analysed to identify post-glacial vegetation and environmental changes, and to investigate the responses of lake ecosystems to such changes. Based on the pollen record, five major vegetation and climate changes could be identified: (1) A shift from alpine desert to alpine steppe indicates a change from cold, dry conditions to warmer and more moist conditions at 14.8 cal. ka BP, (2) alpine steppe with tundra elements points to conditions of higher effective moisture and a stepwise warming climate at 13.6 cal. ka BP, (3) the appearance of high-alpine meadow vegetation indicates a further change towards increased moisture, but with colder temperatures, at 7.0 cal. ka BP, (4) the reoccurrence of alpine steppe with desert elements suggests a return to a significantly colder and drier phase at 6.3 cal. ka BP, and (5) the establishment of alpine steppe-meadow vegetation indicates a change back to relatively moist conditions at 2.2 cal. ka BP. To place the reconstructed climate inferences from the NE Tibetan Plateau into the context of Holocene moisture evolution across the Tibetan Plateau, I applied a five-scale moisture index and average link clustering to all available continuous pollen and non-pollen palaeoclimate records from the Tibetan Plateau, in an attempt to detect coherent regional and temporal patterns of moisture evolution on the Plateau. However, no common temporal or spatial pattern of moisture evolution during the Holocene could be detected, which can be assigned to the complex responses of different proxies to environmental changes in an already very heterogeneous mountain landscape, where minor differences in elevation can result in marked variations in microenvironments. Focusing on the past 200 years, I analysed the sedimentary records (LC6 Lake 29.5°N, 94.3°E, 4132 m asl; and Wuxu Lake 29.9°N, 101.1°E, 3705 m asl) from the southeastern Tibetan Plateau. I found that despite presumed significant temperature increases over that period, pollen and diatom records from the SE Tibetan Plateau reveal only very subtle changes throughout their profiles. The compositional species turnover investigated over the last 200 years appears relatively low in comparison to the species reorganisations during the Holocene. The results indicate that climatically induced ecological thresholds are not yet crossed, but that human activity has an increasing influence, particularly on the terrestrial ecosystem. Forest clearances and reforestation have not caused forest decline in our study area, but a conversion of natural forests to semi-natural secondary forests. The results from the numerical proxy comparison of the two sets of two pairs of Tibetan lakes indicate that the use of different proxies and the work with palaeo-ecological records from different lake types can cause deviant stories of inferred change. Irrespective of the timescale (Holocene or last 200 years) or region (SE or NE Tibetan Plateau) analysed, the agreement in terms of the direction, timing, and magnitude of change between the corresponding terrestrial data sets is generally better than the match between the corresponding lacustrine data sets, suggesting that lacustrine proxies may partly be influenced by in-lake or local catchment processes whereas the terrestrial proxy reflects a more regional climatic signal. The current disaccord on coherent temporal and spatial climate patterns on the Tibetan Plateau can partly be ascribed to the complexity of proxy response and lake systems on the Tibetan Plateau. Therefore, a multi-proxy, multi-site approach is important in order to gain a reliable climate interpretation for the complex mountain landscape of the Tibetan Plateau. / Die räumlichen und zeitlichen Temperatur- und Feuchtigkeitsmuster auf dem Tibet-Plateau sind sehr komplex. Im Einzugsbereich der asiatischen Monsune sind insbesondere der Beginn und das Ausmaß des Klimaoptimums während des Holozäns von wissenschaftlichem Interesse, da diese Periode oft als Analogie für die derzeitige globale Klimaerwärmung herangezogen wird. In Hinblick auf sich teilweise widersprechende Paläoklima- und Umweltrekonstruktionen für das Tibet-Plateau, ist es mein Ziel, die bestehenden Unstimmigkeiten bezüglich des Zeitpunktes und des Ausmaßes des Umweltwandels zu erklären. Dafür wurden von mir zeitliche Variationen fossiler Pollen- und Diatomeenspektren und geochemische Untersuchungen an Seesedimenten unterschiedlicher Zeitskalen (Spätquartär und die letzten 200 Jahre) aus zwei Kernregionen auf dem NO und SO Tibet-Plateau analysiert. Zur Unterstützung der Interpretation wurden die hier erhobenen Daten mit bereits vorhandenen paläoökologischen Aufzeichnungen der Lokalitäten kombiniert, um Datensätze der entsprechenden aquatischen und terrestrischen Proxy-Daten (Stellvertreterdaten) zweier Seenpaare aus den beiden Regionen gegenüberstellen zu können. Hierbei konzentrierte ich mich auf den direkten Vergleich von Proxies, die die Seenentwicklung reflektieren (z.B. Diatomeen, Ostracoden, geochemische Eigenschaften), mit Proxies, die Veränderungen der terrestrischen Umgebung des Sees beschreiben (terrestrische Pollen). Durch diesen Vergleich lässt sich beurteilen, ob Veränderungen im See selbst mit Umweltveränderungen in dem jeweiligen Einzugsgebiet zeitlich übereinstimmen. Dafür habe ich die bereits etablierte numerische Methode Procrustes-Rotation als neuen Ansatz in der Paläoökologie eingeführt. Damit ist ein quantitativer Vergleich von Rohdaten zweier beliebiger sedimentärer Datensätze möglich, um den Grad der Übereinstimmung zu prüfen. Um die in dieser Arbeit rekonstruierten Umwelt- und Klimaereignisse des nordöstlichen Tibet-Plateaus in einen größeren Zusammenhang hinsichtlich holozäner Klimaentwicklung des gesamten Plateaus setzen zu können, und um schlüssige zeitliche und räumliche Klimatrends auf dem Plateau erkennen zu können, habe ich auf alle vorhandenen Paläoklimadatensätze einen Fünf-Skalen Feuchtigkeitsindex und eine Clusteranalyse angewandt. Es konnten jedoch keine einheitlichen zeitlichen und räumlichen Trends der holozänen Klimaentwicklung nachgewiesen werden, was meiner Analyse entsprechend, auf die komplexen Reaktionen verschiedener Proxies auf Umweltveränderungen in einer ohnehin sehr heterogen Berglandschaft, zurückgeführt werden kann. Die Ergebnisse des numerischen Proxy-Vergleichs beider Seenpaare zeigen, dass die Verwendung von verschiedenen Proxies und die Arbeit mit paläo-ökologischen Datensätzen unterschiedlicher See-Typen zu abweichenden Klimaableitungen führen können. Unabhängig vom untersuchten Zeitraum (Holozän oder die letzten 200 Jahren) oder der Region (SO oder NO Tibet-Plateau), ist die Übereinstimmung zweier Datensätze hinsichtlich der Richtung, des Zeitpunktes und des Ausmaßes der abgeleiteten Paläo-Umweltverhältnisse in der Regel zwischen den entsprechenden terrestrischen Datensätzen besser als zwischen den entsprechenden lakustrinen Datensätzen. Die derzeitige Uneinigkeit über stimmige zeitliche und räumliche Klimatrends auf dem Tibet-Plateau kann daher teilweise der Komplexität der verschieden Proxies und ihrer individuellen Empfindlichkeiten gegenüber Umweltveränderungen sowie der unterschiedlichen Reaktionsweise verschiedenartiger See-Systeme auf dem Plateau zugeschrieben werden. Meine Ergebnisse zeigen, dass ein „Multi-Proxy-Multi-Site-Ansatz“ für zuverlässige Paläoklimaableitungen für das Tibet-Plateau von zentraler Bedeutung ist.

This dissertation is a scientific biography of Astrid Cleve von Euler. She was Sweden’s first female Ph.D. graduate in the natural sciences (1898) and pursued a scientific career in spite of formal and cultural limitations. Though she failed to secure a professional position as a scientist, she published numerous papers throughout her life. The dissertation studies her life in general and analyses her research in particular. How did her research change over time in relation to the rest of her life? How did established scientists receive her research? How did her status as a woman on the fringes of academia affect her research? Sociologist Thomas F. Gieryn’s concepts of boundary-work and credibility contests are important analytical tools in the interpretation of these questions, as Cleve’sresearch was regulated by various boundaries: between professionals and amateurs, between men and women and between different academic disciplines. The study is divided into seven chapters. The first chapter introduces the dissertation, its objective and theoretical framework. The remaining chapters follow Cleve’s life in a chronological and sometimes thematic order and the source material is continually analysed. Chapter two accounts for Cleve’s childhood and student years in Uppsala, ending with her Ph.D. graduation. Chapter tree focuses on her research as a chemist and her ten years of marriage to a fellow researcher, Hans von Euler-Chelpin, a marriage that was closely intertwined with their academic studies. The fourth chapter studies Cleve’s controversy with some of the leading quaternary geologists in Sweden at the time, regarding the level changes of the Scandinavian land mass following the latest Ice Age. The fifth chapter diverges slightly from Cleve’s research, and investigates her undertakings in popular science and her political standpoints. Chapter six analyses her archaeological studies as part of the scientific controversy she was involved in, but also as influenced by political and religious views. Finally, the seventh chapter begins with a closer look at Cleve’s diatom studies, already part of most of the study but thus far not focused on as such, and ends with the main conclusions of the entire dissertation project. The dissertation shows that while science was part of Cleve’s life from childhood to death, factors other than her personal desire to uncover scientific truths governed her research opportunities and the topics of her studies. While she was consistently highly regarded as a diatom expert and gained some success as a chemist, disciplines she was formally educated in, she was met with scepticism and eventually silence when she tried to make an impact in quaternary geology and archaeology, fields of research in which she had no formal training. This demonstrates a possibility to simultaneously be regarded as credible and non-credible as a scientist, as credibility is not necessarily attached to the individual, but to his or her formal expertise in a particular area.

The European Union Water Framework Directive (WFD), with initiatives to manage surface water resources, has increased the need for fast and inexpensive methods for monitoring conditions in streams. The objective of this thesis is to assess the potential of near-infrared spectroscopy (NIRS) of epilithic material to become such method. NIRS, which is a technique that is commonly used in industry for process monitoring and quality control of products, registers the chemical properties of organic material on a molecular level. Epilithic material, i.e. the layer of dead and alive material that covers stone surfaces in streams, is continuously influenced by the stream water that flows over it, and it has the potential to integrate chemical and biological conditions over time. The temporal integration is a significant factor, since conditions in streams can change within hours or days. The thesis consists of two published papers. In the first paper a new sampler for epilithic material, the Stone Brusher, was described and the performance evaluated. The Stone Brusher is designed to take qualitative or semi-quantitative samples of epilithic material from stones at 7–50 cm water depth. The epilithic material is dislodged from the stone surface with a rotating brush enclosed in a chamber, and the material is drawn up directly into the sample bottle with an air-cylinder. The operator takes a sample quickly and without putting hands into the water. The sampler is made of plastic, stainless steel and aluminium and weighs 3.1 kg. It is designed to meet the demand for standardized sampling for research and environmental monitoring and to improve working conditions for sampling personnel. The equipment allows sampling from surfaces of bedrock and large stones that cannot be lifted from the bottom. Using data of near-infrared spectroscopy and diatom analyses, this new sampler was evaluated in comparison to the toothbrush method, a primitive method which is the current standard in EU. The results indicate that the Stone Brusher reduces sampling variability compared with the toothbrush method. In the second paper, the Stone Brusher was used to collect epilithic material from 65 sites (42 uncontaminated and 23 contaminated) from streams in the widespread mining area called the Skellefte-district in Västerbotten, northern Sweden, in order to test the hypothesis that impact on the epilithic material caused by emissions from mining and mining-related industries can be detected using NIRS. The epilithic material was filtered onto glass fibre filters, measured by NIRS, and the results were modelled using Principal Component Analysis (PCA). The NIRS approach was evaluated by comparing it with the results of chemical and diatom analyses of the same samples. Based on PCA, the NIRS data distinguished contaminated from uncontaminated sites and performed slightly better than chemical analyses and clearly better than diatom analyses. Of the streams designated a priori as contaminated, 74 % were identified as contaminated by NIRS, 65 % by chemical analysis and 26 % by diatom analysis. Unlike chemical analyses of water or of epilithic material samples, NIRS data reflect biological impacts in the streams. Given that, and the simplicity of NIRS-analyses, further studies to assess the use of NIRS of epilithic material are justified. NIRS has the potential to become a fast method for screening in regions where large numbers of streams occur to find impacted streams or as a routine method for temporal monitoring in selected streams for early detection of environmental impact, similar to process monitoring in industry.