In this thesis, we present a new photometric catalogue of the local Coma galaxy cluster in the Johnson U- and V- bands. We cover an area of 3360arcmin(^2) of sky, to a depth of V = 20mag in a 13 arcsec diameter aperture, and produce magnitudes for ~ 1400 extended objects in metric apertures from 8.8 to 26arcsec diameters. The mean internal RMS scatter in the photometry is 0.014mag in V, and 0.026mag in U, for Via(_13) < 17mag. We use this photometric catalogue to place limits on the levels of scatter in the colour- magnitude relation (CMR) in the Coma cluster. We subdivide the galaxy population by morphology, luminosity and position on the sky, and analyse the CMR in each of them. The lowest levels of scatter are found in the elliptical galaxies, and the late type galaxies have the highest numbers of galaxies blue-wards of the CMR. We finds signs of decreased scatter and systematically bluer galaxy colours with increasing projected radius from the center of the cluster, and attribute it to a mean galactic age gradient. We find that the typical mass of galaxies within clusters can increase by a factor of two through dissipationless merging without destroying the CMR. We compare the spectral line indices of galaxies in the Coma cluster with their deviation from the mean colour-magnitude relation (CMR). We find that the CMR in Coma is driven primarily by a luminosity-metallicity correlation, however we cannot rule out a contribution from age effects. Colour deviations blue-ward of the mean relation are strongly correlated with the Hydrogen Baimer line series absorption, indicating the presence of a young stellar population in these blue galaxies. We use a wavelet code to suggest an association between X-ray cluster substructure and 'E+A' galaxy activity in high redshift clusters.

A significant fraction of the star formation density between z = 1–3 has been traced to luminous and ultra-luminous infrared galaxies. Among the most extreme objects seen are those identified via surveys at submillimetre wavelengths; the high infrared luminosities (LIR = 10¹¹−¹³ L⊙) of these “submillimetre galaxies” (SMGs) arise due to the reprocessing of UV and optical light from massive, young stars by interstellar dust, and imply star formation rates SFR= 50–2000M⊙ yr−¹. Such SFRs, combined with the observed increase in number density of SMGs by a factor ∼ 20× out to z = 2 make them candidates to be the progenitors of the most massive “red and dead” elliptical galaxies which dominate the cores of clusters in the present day, yet limitations in the technical capabilities of radio and infrared telescopes have long hindered a detailed understanding of these galaxies, and in particular, the physics of the interstellar medium (ISM). Hence the following key questions remain unanswered: (i) how much molecular gas (H2) do SMGs contain, and what are the likely upper-limits on how long they can sustain their present level of activity?; (ii) do the prodigious luminosities of SMGs stem from a common origin, or does the selection criterion return a “mixed bag” of galaxies?; (iii) what are internal kinematics of SMGs, and to what extent do these influence the global and local star-formation (Schmidt-Kennicutt) law?; (iv) is star-formation in distant SMGs distributed across the entire galaxy, or does it occur in isolated clumps?; (v) what are the typical densities and temperatures of star-forming regions in SMGs, and do they adhere to the observed correlation between far-infrared and radio emission in star-forming galaxies? Recent upgrades to the Karl G. Jansky Very Large Array (VLA), the inauguration of the Atacama Large Millimeter Array (ALMA), and the superlative legacy of the Herschel Space Observatory have jointly provided the toolkit to study the gas and dust emission in distant galaxies in unprecedented detail, and thus to begin to address these fundamental questions. In this thesis, I present ∼120 hours of new VLA observations of ¹²CO J =1−0 emission – the best tracer of molecular gas – in a sample of four lensed SMGs. The combination of high angular resolution with the VLA and the magnifying effects of gravitational lensing allow the ISM properties of these z ∼ 2.5 star-forming galaxies to be seen for the first time on sub-galactic scales, implying gas masses of 10⁹−¹ºM⊙ (subject to the 12CO-luminosity-to-H2-mass conversion factor, αCO), and demonstrating the presence of an extended, low-excitation gas reservoir. In conjunction with observations of the excited gas phase from the Plateau de Bure Interferometer (PdBI), these new data point to variations in the densities and temperatures of H2 throughout each galaxy. The wide bandwidth and phenomenal sensitivity of the VLA yields the first detections of 115-GHz continuum emission at high redshift, which I use in conjunction with well-sampled dust spectra from Herschel and data at longer wavelengths from the VLA to decompose the radio spectra of two galaxies into contributions arising from thermal dust emission, optically-thin free-free emission from Hii regions, and non-thermal synchrotron emission. From these measurements, estimates of SFRradio are made, providing an independent check on SFRIR, and enabling the degeneracy between the heating of dust due to star formation and that due to hidden AGN activity to be broken. Via this spectral index de-convolution, I find L[AGN]/LIR fractions of 35% and 55% for the two SMGs, in broad agreement with previously published estimates for these sources based on their mid-IR spectral properties. In the exceptional case of SMMJ23152–0102, magnification by the foreground cluster is so extreme (∼ 32.5×) that the VLA synthesised beam traces regions of order ∼ 130 pc in the source plane, and identifies a series of cool, dense clumps (Tk = 30–70 k; log[n(H2)/cm−3]= 3.6–3.9) within the gas reservoir, which contain between them 10–60% of the total molecular gas of the system. These clumps are offset from the far-infrared/radio correlation, which I argue has implications for their ages.

This thesis investigates the morphology of early-type galaxies in two rich clusters using 2D surface photometry. In particular, the amount of light in the 'disk' component is focussed upon, as the presence of a disk is the main morphological criterion in distinguishing between the traditional 'elliptical' and 'S0' classes. Extensive and photometric E-band CCD observations of continuous areas of the Coma and Abell 1367 clusters were obtained at the 2.5 m Isaac Newton telescope, La Palma during March 1994. A subset of this large data-set has been used in this study, comprising a magnitude-limited (to R = 15.6) sample of 153 galaxies in the two clusters. Surface photometry measurements, including surface brightness profiles and isophotal shapes, have been made for the sample. Atmospheric seeing is a major problem when measuring light profiles at the distance of Coma from ground-based telescopes. Typical seeing at La Palma (FWHM~1.2") is a significant fraction of the effective radius of many Coma/Abell 1367 galaxies (r(_e)~3" for small ellipticals). An iterative algorithm was developed to deconvolve the effects of seeing from surface brightness profiles. The result of the algorithm is to extend the range of useful surface photometry inwards to within 2 times the FWHM. In order to parametrise the surface brightness profiles and discriminate between different profile-types, further software was developed to fit one- and two-component model profiles to the seeing-corrected data. The following parameters were measured and tabulated for each of the 153 galaxies: total magnitude M(_t); half-light parameters r (_1/2) and (μ)(_1/2); SB at half-light radius μ(r(_1/2)); photometric diameter D(_19.23) (equivalent to D(_n)); ellipticity at R = 21.5 isophote ϵ(_21.5); averaged isophote high-order terms (C(_3)), (S(_3)), (C(_4)) and (S(_4)); effective radii and surface brightnesses of 5 single power-law r(^1)(_n) models, r"e and (^)"^ (n = 1,2,3,4,5); best-fitting power-law index n; bulge effective radii and surface brightnesses from the two-component fit and (/^)\; disk effective parameters r'^e and {nY^] and disk-to-bulge luminosity ratio DjB. The measured parameters have been used to investigate various aspects of early-type galaxy morphology. The conclusions are outlined below. Firstly, a two-component r? plus exponential model is a better fit to most galaxies than a single component law fit. Secondly, the traditional division of early-type galaxies into 'elliptical' and 'SO' classes is severely biased by the viewing angle. In fact, it appears that early-type galaxies comprise a population of objects with smoothly varying bulge-to-disk ratio - although a few ellipticals (less than 13%) do not appear to have a exponential component. Finally, there is a general correlation (with much scatter) between the size and the profile shapes of early-type galaxies. The interpretation is that smaller galaxies are more disk-dominated than larger galaxies, which can be linked to the merging process in rich clusters.

The PPAK Integral Field Spectroscopy (IFS) Nearby Galaxies Survey: PINGS, a 2-dimensional spectroscopic mosaicking of 17 nearby disk galaxies in the optical wavelength range. This project represents the first attempt to obtain continuous coverage spectra of the whole surface of a galaxy in the nearby universe. The final data set comprises more than 50000 individual spectra, covering in total an observed area of nearly 80 arcmin square. The powerful capabilities of wide-field 2D spectroscopic studies areproven. The chemical composition of the whole surface of a spiral galaxy ischaracterised for the first time as a function not only of radius, but of theintrinsic morphology of the galaxy, allowing a more realistic determination oftheir physical properties. The methodology, analysis and results of thisdissertation will hopefully contribute in a significant way to understand thenature of the physical and chemical properties of the gas phase in spiralgalaxies.

A galaxy’s evolution is quite sensitive to the impact of external influences. In this thesis, the impact of external environment from both large and small scale effects is investigated, along with a study of how the HI gas fraction of a galaxy can modulate a galaxy’s response to perturbations by galaxy–galaxy interactions. This thesis makes use of the statistical power of the Sloan Digital Sky Survey Data Release 7 (SDSS DR7) to assemble a large spectroscopic sample of galaxies, select samples of interest, and select control samples of galaxies matched to each galaxy within the sample of interest in mass, redshift, and (if applicable) local density. It is possible to trace a galaxy’s internal gas motions which mark its disturbance by using the metrics of star formation rate (SFR) and gas-phase metallicity. To investigate the influence of large scale environment, a sample of star forming galaxies in a locally dense environment, but relatively isolated from larger scale structure, is constructed. This sample is further divided into groups which are truly isolated from any large scale structure (no cluster potential within 1 Mpc), and those which, in spite of their relative local isolation, are embedded within a larger cluster structure (within 1 Mpc of a cluster). As the local galaxy density is identical between isolated and embedded group structures, a fair comparison between the star forming properties of the galaxies within those group structures can be made. Star forming galaxies whose groups are embedded within a larger structure are found to show statistically lower SFRs than those galaxies whose groups are truly isolated from any larger cluster potential. The impact of local galaxy–galaxy interactions is subsequently considered. Using a sample of star-forming galaxies in pairs from the SDSS DR7, the enhancement in SFRs and the suppression of metallicities is traced as a function of projected separation (rp). The metallicity dilution as a function of rp is presented for the first time. Galaxies in pairs are found to have SFRs and metallicity values which are offset from a carefully selected control sample to separations of at least 80 kpc/h. Using a suite of simulations developed for the purposes of comparison with these observational results, a new interpretive framework is developed for enhancements as a function of rp. To investigate the role that gas fraction plays in moderating the strength of interaction triggered starbursts, new data is obtained from the Jansky Very Large Array (VLA). The VLA data supplements the existing SDSS data with HI gas masses for a subsample of resolvable galaxy pairs at small rp(in kpc/h). HI masses are obtained and gas fractions are calculated for a sample of 34 paired galaxies. A positive correlation is detected at > 2σ between the gas fraction of a galaxy and the SFR enhancement of that galaxy. The work presented in this thesis has expanded the understanding of physical variables, both internal and external, which can change the star forming properties of a galaxy through an examination of tracers of internal gas flows in those galaxies. / Graduate / 0606 / jillian.scudder@gmail.com

A galaxy’s evolution is quite sensitive to the impact of external influences. In this thesis, the impact of external environment from both large and small scale effects is investigated, along with a study of how the HI gas fraction of a galaxy can modulate a galaxy’s response to perturbations by galaxy–galaxy interactions. This thesis makes use of the statistical power of the Sloan Digital Sky Survey Data Release 7 (SDSS DR7) to assemble a large spectroscopic sample of galaxies, select samples of interest, and select control samples of galaxies matched to each galaxy within the sample of interest in mass, redshift, and (if applicable) local density. It is possible to trace a galaxy’s internal gas motions which mark its disturbance by using the metrics of star formation rate (SFR) and gas-phase metallicity. To investigate the influence of large scale environment, a sample of star forming galaxies in a locally dense environment, but relatively isolated from larger scale structure, is constructed. This sample is further divided into groups which are truly isolated from any large scale structure (no cluster potential within 1 Mpc), and those which, in spite of their relative local isolation, are embedded within a larger cluster structure (within 1 Mpc of a cluster). As the local galaxy density is identical between isolated and embedded group structures, a fair comparison between the star forming properties of the galaxies within those group structures can be made. Star forming galaxies whose groups are embedded within a larger structure are found to show statistically lower SFRs than those galaxies whose groups are truly isolated from any larger cluster potential. The impact of local galaxy–galaxy interactions is subsequently considered. Using a sample of star-forming galaxies in pairs from the SDSS DR7, the enhancement in SFRs and the suppression of metallicities is traced as a function of projected separation (rp). The metallicity dilution as a function of rp is presented for the first time. Galaxies in pairs are found to have SFRs and metallicity values which are offset from a carefully selected control sample to separations of at least 80 kpc/h. Using a suite of simulations developed for the purposes of comparison with these observational results, a new interpretive framework is developed for enhancements as a function of rp. To investigate the role that gas fraction plays in moderating the strength of interaction triggered starbursts, new data is obtained from the Jansky Very Large Array (VLA). The VLA data supplements the existing SDSS data with HI gas masses for a subsample of resolvable galaxy pairs at small rp(in kpc/h). HI masses are obtained and gas fractions are calculated for a sample of 34 paired galaxies. A positive correlation is detected at > 2σ between the gas fraction of a galaxy and the SFR enhancement of that galaxy. The work presented in this thesis has expanded the understanding of physical variables, both internal and external, which can change the star forming properties of a galaxy through an examination of tracers of internal gas flows in those galaxies. / Graduate / 0606 / jillian.scudder@gmail.com

Recent detections of massive quasars at z &gt; 6 has proven to be an interesting challengefor cosmology given the short time frame that these objects have to reach a certainmass via conventional methods (e.g., galaxy mergers). Direct collapse black holes(DCBHs) are theorized black hole seeds that propose a neat solution to the formationof supermassive black holes (SMBHs) by z ≳ 6. During this report, we followed thefirst photometric method developed to identify these black hole seeds, adapting it tothe James Webb Space Telescope (JWST ) photometric system to facilitate its usefor upcoming data. Two DCBH models were used to discard nearby objects (e.g.,cool stars, brown dwarfs and giant exoplanets) as possible interlopers, and allowed usto identify a possible confusion between DCBH signatures and high-redshift galaxies(z = 6) within an age range of 0.8-0.9 Gyr. This confusion could grow larger if wereconsider the analysis adding dust to the galaxy models we used

In this thesis we address fundamental questions about what constitutes and limits an HI disc, probing the distribution of neutral gas in the outer parts of galaxies. We use a subsample of galaxies observed as part of the THINGS survey to investigate the HI extent of spiral galaxy discs. We revisit previous work on the extent of HI discs, showing the limitations set by insufficient linear resolution. We then exploit the high spatial and velocity resolution combined with good sensitivity of THINGS to investigate where the atomic gas discs end and what might shape their edges. We find that the atomic gas surface density across most of the disc is constant at 5 – 10 x 10^20 atoms/cm^2 and drops sharply at large radius. The general shape of the HI distribution is well described by a Sérsic-type function with a slope index, n = 0.14 - 0.22 and characteristic radius ri. We propose a new column density threshold of 5 x 10^19 atoms/cm^2 to define the extent of the gas disc. This limit is well within reach of modern instruments and is at the level where disc gas becomes susceptible to ionisation by an extragalactic radiation field. We argue that at this level the HI column density has decreased to one tenth of that across the inner disc and that by going to yet lower column density the disc is unlikely to grow by more than 10% in radius. The HI column density at which the radial profiles turn over is too high for it to be caused by ionisation by an extragalactic UV field and we postulate that the HI extent is set by how galaxy discs form. Ionisation by extragalactic radiation will only play a rôle at column densities below 5 x 10^19 atoms/cm^2, if any. To study the crucial relation between observed edges and how closely these reproduce the intrinsic distribution of gas through our interferometric measurements, we created an ensemble of models based on four radial density distributions. We conclude that the observed edges in spiral galaxies faithfully reflect their intrinsic shape. Only in very specific cases of highly inclined (>75º) and/or large vertical scaleheight discs do we see strong deviations from the intrinsic surface density of the observed shape of the edges in spiral galaxies. In the case of NGC 3198 we concluded that there is no significant difference in the radial profiles obtained with either constant or exponentially increasing vertical gas distributions, when scaleheights are not higher than 1 kpc at the outskirts of the disc. We infer an upper limit to the scaleheight of NGC 3198 of 2 kpc. To address the distribution of neutral gas at larger scales, we study an HI rich, giant LSB galaxy, NGC 765. We present HI spectral line and radio-continuum VLA data, complemented by optical and Chandra X-ray maps. NGC 765 has the largest HI-to-optical ratio known to date of any spiral galaxy and one of the largest known HI discs in absolute size with a diameter of ~ 240 kpc measured at a surface density of 2 x 10^19 atoms/cm^2. We derive a total HI mass of M_HI = 4.7 x 10^10 M_sun, a dynamical mass of M_dyn = 5.1 x 10^11 M_sun and an HI mass to luminosity ratio of M_HI/L_B = 1.6, making it the nearest and largest “crouching giant”. Optical images reveal evidence of a central bar with tightly wound low-surface brightness spiral arms extending from it. Radio-continuum (L_1.4 GHz = 1.3 x 10^21 W/Hz) and X-ray (L_x ~ 1.7 x 10^40 erg/s) emission is found to coincide with the optical core of the galaxy, compatible with nuclear activity powered by a low-luminosity AGN. We may be dealing with a galaxy that has retained in its current morphology traces of its formation history. In fact, it may still be undergoing some accretion, as evidenced by the presence of HI clumps the size (< 10 kpc) and mass (10^8 -10^9 M_sun) of small (dIrr) galaxies in the outskirts of its HI disc and by the presence of two similarly sized companions. In an exploration of future work, we engaged in a study of the edges in the HI discs of dwarf irregular galaxies, their parameterisation and simulation. A collection of simulations were created based on the dwarf galaxy NGC 2366, similar to what was done for the larger spiral galaxies, showing that line-of-sight column densities are affected for discs with inclinations higher than 60º. Five out of eleven of the dwarfs from THINGS which are less inclined than 60º were analysed and parameterised with our Sérsic-type function. Their discs have average central column densities spread evenly from log_10 NHI = 20.7 atoms/cm^2 to log_10 NHI =21.3 atoms/cm^2. Their radial decline is shallower (slope index peaks around n ~ 0.3) than for spirals. The up-coming Local Irregular That Trace Local Extremes (LITTLE) THINGS project, will likely enlarge the number of local dwarf irregular (dIm) galaxies to which this type of analysis can be applied and for which these preliminary results verified.

Active galactic nuclei (AGN) jets are energetic phenomena where twin jets of plasma emerge perpendicular to the plane of the accretion disk surrounding supermassive black holes in galactic centers. Radio-loud jets are largely divided into classes based on the angle of observation (blazars versus radio galaxies), spectral line widths (Flat Spectrum Radio Quasars/FSRQs versus BL Lac objects/BL Lacs), and location of the synchrotron peak frequency in their spectral energy distribution (high-spectral peaked/HSP, intermediate-spectral peaked/ISP, or low-spectral peaked/LSP).<br><br>The linear fractional polarization of the radio emission and the direction of the polarization plan (electric vector position angle, "EVPA'') can be measured, providing information on the properties of the jets' magnetic field. This study uses and describes some processing of data from the MOJAVE program, taken with the VLBA at 15 GHz, to investigate the polarization behavior of 387 AGN. <br><br>The most polarized jets have good alignment between the EVPA and the local jet direction, and higher stability in both fractional polarization and the EVPA. This characterization best describes BL Lacs, which are notably different from FSRQs. HSP BL Lacs have lower fractional polarization than LSP BL Lacs, with fractional polarization partially dependent on apparent jet speeds. These results have supported a scenario where HSP BL Lacs and LSP BL Lacs are similar objects with differing relativistic beaming factors, while FSRQs and BL Lacs as a class have inherent differences in the makeup of their magnetic fields.

Understanding the formation and evolution of galaxies is a crucially important task in modern astronomy. It is well known that galaxy formation is strongly affected by the environments they reside in. Galaxy clusters, as the densest large-scale structures in the Universe, thus serve as ideal laboratories to study how galaxy formation proceeds in dense environments. Clusters already began to form at $z>2$, therefore to directly witness the early stage of galaxy formation in dense environments, it is necessary to identify progenitors of clusters (`protoclusters') and study their galaxy constituents within. In this thesis, I present two observational studies on high-redshift protoclusters at $z>3$. Utilizing multiwavelength data and different galaxy selection techniques, significant galaxy overdensities are found in the two protoclusters, which are predicted to evolve into Coma-like clusters by present day. Various types of galaxies are identified in the protocluster, such as normal star-forming galaxies, massive quiescent galaxies and post-starburst galaxies. Together with extreme and rare sources such as giant Lyman-alpha nebulae and brighest cluster galaxy, they paint a picture of how different galaxy populations trace the underlying dark matter halos. Finally, the environmental impact on galaxy properties appears to be a subtle one for these protoclusters, which might depend on the galaxy population one chooses to study.