Artificial beach nourishment, the most common method to mitigate coastal erosion in the United States, is also considered the most ecologically friendly alternative for shoreline stabilization. However, this habitat alteration has the potential to impact nesting marine turtles and developing hatchlings. The first objective of this study was to determine how nourishing beaches with two different design templates affects loggerhead (Caretta caretta) and green turtle (Chelonia mydas) nesting success, the ratio of nests to the total number of nests and non-nesting emergences, and reproductive success, the ratio of hatched and emerged hatchlings to the total number of eggs deposited. Two types of restoration designs exist along the southern Brevard County, FL coastline, which supports some of the highest density loggerhead and green turtle nesting worldwide. Since 2005, approximately 35 kilometers of beach have undergone 1) fullscale restoration (typically called nourishment), where sand was added above and below the mean high tide line (2005, 2010) or 2) dune restoration, where sand was placed on the dune (2005, 2006, 2008, 2009). To quantify the effects of these restoration types, we used a Before-After-ControlImpact-Paired Series (BACIPS) model, which tests for significance between the difference in nesting success rates at the impact (engineered) and control sites (natural beach) before and after restoration ( ). For loggerheads, there was a significant difference in after dune restoration during the years of construction (2005, 2006, 2008, and 2009; p

Marine turtles exhibit strong fidelity to their nesting beaches, making the conservation of nesting beaches important for ensuring successful sea turtle populations. Conservation of these nesting beaches involves understanding how species interact with the environment and each other, and understanding how environmental change and population growth can affect the suitability of the nesting habitat. The Archie Carr National Wildlife Refuge (ACNWR) is unusual in its high density of sea turtle nesting by two species: green (Chelonia mydas) and loggerhead (Caretta caretta) turtles. The ACNWR in Melbourne Beach, Florida was established in 1991 due to the high density of loggerhead nesting, but in the time since it was established there has been a significant increase in green turtle nesting, from fewer than 50 nests in 1982 to over 15,000 in 2017. With such a high density of these two species in one relatively small area (21 kilometers of beach), the two species may compete for space. This is especially true for green turtles, which disturb large amounts of sand during their nesting process; in 2017, we observed 338 loggerhead clutches disturbed by nesting females during nesting surveys, nearly all of which were disturbed by green turtles. Using observed spatial and temporal nesting patterns for both green turtles and loggerheads on the ACNWR, I examined the effects these species may have on each other's nests now and in the future. Additionally, green turtles and loggerheads nest in different densities along the length of the ACNWR, with green turtles more concentrated in the southern portions of the Refuge. Finally, green turtle nesting begins and peaks approximately one month later on the ACNWR than loggerhead nesting. For each of these metrics, there is both considerable overlap and distinct separation between the two species. By using these metrics in a modeling approach, I estimated the probability of nest disturbance by a subsequently nesting female, ranging from 0 to 0.105, and how these probabilities are predicted to change over time with a growing green turtle population. Evaluating the carrying capacity of this beach is important in the context of habitat disturbance, including climate change and an increase in storm frequency, and informing adaptive management strategies for effective conservation.

Causes of morbidity and mortality were investigated for 108 green turtles (Chelonia mydas) stranded in south-east Queensland between 1990 and 1996. This study was undertaken as part of a broader carcass salvage program for south Queensland, and within the context of a population study of C. mydas in the Moreton Bay feeding ground. Accurate pathological characterisation of disease in C. mydas was achieved by detailed necropsy and histological examination. Varied inflammatory responses and degenerative changes were observed in stranded C. mydas. Supportive disciplines of microbiology, parasitology, and clinical chemistry were used to elucidate aetiology and pathogenesis of selected conditions. Heavy metal and pesticide levels were assessed in a sub-sample of turtles. Direct anthropogenic causes (including trauma, foreign body ingestion and drowning) accounted for 34% of mortalities of C. mydas in this study. The majority of the trauma cases were turtles with skull fractures resulting from blunt impacts. The remainder had boat propeller injuries, or miscellaneous trauma. Almost half of the turtles with lethal boat propeller damage had evidence of pre-existing disease which may well have predisposed them to boat strike, emphasising the importance of full necropsy examination, even when the cause of death appears obvious. Fishing line was the only ingested foreign body consistently implicated in the production of fatal intestinal obstruction. Marine turtle fibropapillomatosis, a panzootic viral disease which is considered to involve some indirect anthropogenic factors, accounted for 7% of mortalities. The findings in this study were consistent with much of the previously described pathology of this condition. Naturally-occurring diseases (for which human influences are unknown) accounted for the remaining 59% of strandings. Coccidiosis, caused by Caryospora cheloniae, was recorded for the first time in wild C. mydas. It occurred both as an epizootic (in 1991) and as sporadic cases. A variety of manifestations, including disseminated and enteric forms, were recognised. Infection with a Cryptosporidium-like protozoan appeared to occur concurrently with coccidiosis in one turtle in this study. Attempts to establish experimental coccidial infections in hatchling C. mydas were unsuccessful. Infections with cardiovascular (spirorchid) flukes were almost universal in stranded C. mydas in this study. They ranged from mild, incidental findings (such as occasional fluke vii egg granulomas evident microscopically in otherwise normal tissues) to a variety of severe changes, including thrombosis, which were likely to have produced morbidity. The present study clarified the range of cardiovascular lesions associated with spirorchidiasis, including the sequence of thrombus resolution and exteriorisation from vessels. In some cases spirorchid vasculitis was associated with fatal disseminated bacterial infections. Other sporadic, naturally-occurring diseases included mycotic pneumonia, bacterial meningoencephalitis and a miscellany of gastrointestinal conditions, including chronic intestinal tympany and obstipation, for which the underlying cause could not always be determined. Evidence indicated that gastrointestinal motility in C. mydas was prone to both direct and indirect disturbance and that tympany and obstipation could be final common outcomes of a range of insults. Eighteen abnormally buoyant turtles were examined during this study. The cause could usually be ascribed to an underlying disease, including (in decreasing order of frequency) trapped internal gas, usually intestinal; neurological disease such as traumatic brain injuries; and pulmonary disease. In two cases, no underlying cause was detected. Trace metal (arsenic, cadmium, mercury, selenium and zinc) concentrations were determined in the livers and kidneys of 50 turtles of mixed species (mostly C. mydas). These results were considered to provide baseline data for sea turtles in SE Qld. This study offered the largest dataset available for some metals in C. mydas, and provided evidence of high background levels of cadmium as a normal feature for the species. Some unusual age–related trends in metal accumulation were detected. Concentrations of cadmium, zinc and selenium in the kidney decreased with increasing age, whereas zinc concentrations in the liver tended to increase. Determining the impact of disease on wildlife populations is an increasingly necessary task, which will require multidisciplinary teams. Necropsy surveys like the present study are an essential component of the growing field of conservation medicine. In addition to providing data relevant to management, such as the relative proportions of anthropogenic and naturally-occurring mortalities, necropsy surveys can identify a range of endemic pathogens, and help to collect prevalence data for determining disease impacts at the population level.

La forte hétérogénéité de l'écosystème marin se traduit par une production inégale des ressources sur un large éventail d'échelles spatio-temporelles, qui conditionne par conséquent les déplacements des tortues marines. Considéré comme l’un des plus dynamiques au monde, le plateau des Guyanes est une région très complexe d'un point de vue océanographique et qui héberge trois des sept espèces de tortues marines présentes dans le monde (la tortue olivâtre, la tortue verte et la tortue luth). L'objectif de cette thèse était de comprendre comment les contraintes océanographiques peuvent-elles influencer les déplacements en mer de ces trois espèces. Le déploiement de 55 balises satellites sur des femelles reproductrices en Guyane française a permis de fournir des informations sur leurs trajectoires, sur leur comportement de plongée et sur les caractéristiques de leur environnement. Notre étude a mis en évidence une forte plasticité comportementale interspécifique qui semble être principalement dictée par les traits reproducteurs, les stratégies de reproduction, les conditions locales de l'habitat ou encore les adaptations physiologiques. / The strong heterogeneity of the marine ecosystem leads to a patchy distribution of the resources in time and space, shaping therefore the movements of sea turtles. Considered as the most dynamic ecosystem in the world, the Guiana shield is a highly dynamic system which hosts three of the seven sea turtle species in the world (the olive ridley, the green turtle and the leatherback turtle). The aim of this thesis was to understand how the oceanographic constraints can influence the at-sea movements of these three species during the reproduction and the migration phases. The deployment of 55 satellite tags on adult females in French Guiana provided information on their trajectories, their diving behavior and on the environment encountered. Our study shows a strong behavioral plasticity between species, which seems to be mainly dictated by the reproductive traits and strategies, the local conditions of the habitat and the physiological adaptations.

Climate change threatens to disrupt biological systems around the globe, sparking debate over natural capacity for adaptation in a fragmented landscape. Marine turtles are evolutionarily ancient and have survived millions of years of prehistoric climate change, but are threatened by the rapidity of modern warming and a history of severe overexploitation that has left most populations depleted. This thesis explores a nesting aggregation of the green turtle (Chelonia mydas) in northern Cyprus, where a longitudinal programme of both intensive and extensive monitoring enables insight into individual and population level parameters and processes. Nesting on the two coastlines covered by this project is in the early stages of recovery, possibly in response to exhaustive nest protection efforts over the last twenty years. Saturation tagging at one key site allows us to confirm that recruitment of new breeders is an important driver of this trend, and that average clutch frequency has remained stable around three nests per female per year, validating nest-count derived abundance estimates at a regional scale. Concern has been raised, however, regarding recent changes in fishing practices which are impacting the local juvenile neritic phase, which may have a lagged effect on the recovery of this nesting population. A collaborative tracking effort including all other countries with major nesting in the Mediterranean allows us to identify major foraging grounds for this species, with two hotspots accounting for >50% of tracked individuals, as well as coastal and pelagic seasonal corridors of high use. Bycatch levels and mortality rates for turtles in these key areas are largely unknown and should be prioritised for investigation. Hatchling sex ratios from the main study beach are extremely female-biased (estimated 97% female for the twenty year period 1993-2012). A 1oC rise in average incubation temperatures threatens near complete hatchling feminisation on this beach, whilst a 2oC rise could reduce hatch success to less than 50%. Thermal effects on hatchling morphometrics are evident, with a 1oC rise in temperature reducing average length, width and weight by 1%, 2% and 3% respectively. More favourable incubation conditions were found early in the season, in deeper nests laid by larger females, and on beaches of lighter sand. In contrast, adult sex ratios at the main site are male-biased, posing questions regarding sex-specific survival rates and optimal hatchling sex ratios. A phenological shift towards earlier nesting is demonstrated for the first time in this species, and could potentially ameliorate warming effects. Carry-over climate forcing effects from the foraging ground influence the breeding frequency of individuals, driving population level responses in annual magnitude of nesting. This work emphasises the utility and necessity of long-term individual-based monitoring programmes in elucidating population trends and climate responses in iteroparous species with non-annual breeding.

<p dir="ltr">The Northwest Atlantic Ocean, which surrounds the US eastern coastline, is an area rich in marine life. The US eastern coastline is also highly urbanized, resulting in a lot of pollutants (like heavy metals) entering the marine environment. This is of concern for long-lived marine species like sea turtles. Since sea turtles are long-lived and highly migratory, their tissues can often incorporate these pollutants through environmental and dietary exposure. I collected tissue samples from 5 different sea turtle populations in the Northwest Atlantic and analyzed them for concentrations of silver (Ag), aluminum (Al), arsenic (As), cadmium (Cd), cobalt (Co), chromium (Cr), iron (Fe), manganese (Mn), nickel (Ni), lead (Pb), selenium (Se) and zinc (Zn) using an Inductively Coupled Plasma Mass Spectrometry (ICP-MS). The first chapter looks at skin (reflects exposure ~1 year ago) and scute (reflects exposure from 4-6 years ago) samples collected during necropsies of juvenile green (<i>Chelonia mydas</i>) (n=8), Kemp’s ridley (<i>Lepidochelys kempii</i>) (n=30) and loggerhead (<i>Caretta caretta</i>) (n=17) turtles that were found cold-stunned in Cape Cod Bay, Massachusetts. In scute samples, the heavy metal with the highest concentration for green turtles was iron, zinc for loggerhead turtles, and arsenic for Kemp’s ridley turtles. In skin samples, the heavy metal with the highest concentration for green turtles was iron, arsenic for loggerhead turtles, and aluminum for Kemp’s ridley turtles. Overall, I found scute samples to have higher heavy metal concentrations than skin samples. The second chapter looks at scute samples collected from loggerhead turtles of different life stages. These samples were collected during necropsies of cold-stunned loggerhead turtles from Cape Cod Bay, Massachusetts (CCB; n=17), as well as from live loggerhead turtles in the Mid-Atlantic Bight (MAB; n=37) and off the coast of North Carolina (NC; n=9). We also collected commonly known loggerhead turtle prey items including whelk (<i>Buccinum undatum</i>) (n=12), Atlantic scallop (<i>Placopecten magellanicus)</i> (n=10) and Jonah crab (<i>Cancer borealis</i>) (n=5) from the Mid-Atlantic Bight region to study the occurrence of biomagnification through trophic pathways. NC loggerhead turtles had higher heavy metal concentrations than other locations except for cadmium and zinc, where CCB loggerhead turtles were higher. I found that all heavy metals except silver, cadmium, and lead appear to be biomagnified (TTF>1) in loggerhead turtles. These two chapters provided baseline information on heavy metal concentrations in sea turtles in east coast US.</p>

<p>Effective conservation strategies for sea turtles require knowledge of animal movements and protection of biologically important habitats and life history stages. For breeding adult sea turtles, understanding both their inshore and pelagic spatial patterns is imperative to the successful protection of the species and the accurate identification of their vulnerabilities. This study provides insight into the inter-nesting, post-nesting, and foraging movements of green sea turtles (<i>Chelonia mydas</i>) that nest on Bioko Island, Equatorial Guinea, by using satellite telemetry to track green turtles (n=12) during two nesting seasons (2017-18, 2018-19), and as they migrated to foraging grounds after the nesting season. These tracks were fit with a switching state space model to characterize movements, and then analyzed in relation to environmental and anthropogenic factors. Dive depth data was also used to determine utilization patterns within the water column. The 12 tagged turtles migrated for an average of 1064 km to two distinct foraging grounds, with 10 migrating west for an average of 1115 km to the coastal waters of Ghana, and 2 migrating south for an average of 1563 km to the coastal waters of Angola. Migrating turtles used both direct, pelagic migration strategies, and biphasal, coastal strategies, which included intermittent foraging throughout migrations. Dive depths varied depending on behavior, with an average of 19.3 m during inter-nesting, 12.6 m during migration and 8.5 m during foraging. Knowledge of inter-nesting habitat use, migration patterns, and foraging ground locations will be critical for the development of marine conservation management plans in the Gulf of Guinea and aide in sea turtle conservation efforts throughout the area. Additionally, spatial and dive depth data can inform zonal fishing regulators and provide information needed for modifications to fishing practices and gear that is most likely to reduce sea turtle bycatch. These data will provide a more complete understanding of marine areas critical to sea turtle conservation and aide in sustainable economic development in the Gulf of Guinea.</p><br>

Ce travail de thèse s'insère dans une démarche globale d'acquisition des connaissances sur la tortue verte (Chelonia mydas) dans l'océan Indien occidental et ce afin de disposer d'éléments scientifiques essentiels à la mise en place d'une gestion cohérente et efficace de cette espèce menacée. Dans un premier temps, appliquant différentes modèles statistiques, ce travail a visé à établir des données de référence sur l'abondance des tortues vertes femelles en reproduction et les tendances sur le long terme des principales populations. Dans un second temps, il a consisté à déterminer la structure génétique et les relations qui existent entre les différentes populations de cette espèce. Enfin, la conservation des tortues marines étant étroitement liée aux pressions extérieures, ce travail a tenté dans un troisième temps de caractériser les pressions anthropiques qu'elles subissent, et notamment celles liées à la pêche. L'ensemble de ces résultats a permis de réaliser des avancées majeures dans la connaissance de la biologie et de l'écologie de la tortue verte et de disposer d'une vision régionale fiable de l'état de conservation de cette espèce dans l'océan Indien occidental. Leur compilation a ainsi permis d'identifier des zones régionales prioritaires de protection mais aussi des sites de vigilance plus spécifiques comme celui d'Europa. Enfin cette synthèse met en lumière les priorités de recherche et les approches scientifiques à favoriser à l'avenir pour améliorer les connaissances et affiner les priorités de conservation non seulement des tortues marines, mais aussi de la mégafaune marine en général. / This thesis is a comprehensive work aiming to improve scientific knowledge on the green turtle (Chelonia mydas) in order to provide key scientific evidences needed for the implementation of coherent and effective management measures to protect at the Western Indian Ocean scale this threatened species. In a first step, this work aimed to established baseline data on the abundance of green turtles nesting females and long term trends of some key nesting populations of the region by applying different modelling methods. In a second step, this work determined the regional genetic structure of this species and the relationships that exists between the different populations. Finally, the conservation of marine turtles being closely dependant to external pressures, this work tried to characterize theanthropogenic pressures they face, more specifically those related to fishing activities. All these results allowed unraveling some key gaps on the biology and ecology of the green turtle in the region and led to a global vision of the conservation status of this species in the Western Indian Ocean. The compilation of the results enabled the identification of regional priority areas for protection, but also some more specific threatened sites such as Europa. Finally, this synthesis shedslight on research priorities and scientific approaches to be promote in the future to unlock other keyscientific issues and refine conservation priorities, not only of marine turtles, but also of marine megafauna as a whole.