The subsumed work of this dissertation is comprised of three independent but interrelated studies which seek to further the understanding of processes which govern the coprecipitation of trace elements with calcite and aragonite minerals. These studies investigate the effects of: 1) pressure on crystal morphology and trace element incorporation to aragonite; 2) growth rate on uranium partitioning between calcite and fluid; 3) aqueous Mg/Ca on the magnesium partitioning to low-magnesium calcite. The importance of this work is to determine how the environment of formation and growth rate influences the geochemistry of CaCO3 in order to improve existing paleoproxies and develop new ones. In the first study a series of experiments were conducted at 1, 25, 75, 100, and 345 bars of nitrogen – this range covers pressures at the oceanic floor. Aragonite precipitation was induced by the one-time addition of a Na2CO3 solution to an artificial seawater. Results suggest that oceanic floor pressures could affect the crystallization of CaCO3 by altering mineralogical composition and aragonite crystal size. In the second study calcite crystallized from NH4Cl-CaCl2-U solution by diffusion of CO2. The calcite growth rate was monitored by sequential spiking of the calcite-precipitating fluids with REE dopants. The resulting crystals were analyzed using Secondary Ion Mass Spectrometry (SIMS). Results showed that the partitioning of uranium increases with increasing growth rate. Growth entrapment model (GEM) and unified uptake kinetics model (UUKM) explain the obtained data.In the third study CaCO3 precipitated in NaCl solution by continuous addition of CaCl2, MgCl2, and either Na2CO3 or NaHCO3. The Mg/Ca of the fluid was adjusted in an attempt to produce calcite where Mg/Ca would match Mg/Ca in foraminifera shells. It was observed that multiple CaCO3 polymorphs precipitated from fluids at high pH (Na2CO3 doping experiments). This result underscores the potential control of pH and/or supersaturation state on CaCO3 polymorph precipitated from low Mg/Ca solutions. Calcite was the only mineral crystallized at low pH (NaHCO3 doping experiments). It was determined that Mg partition coefficient between calcite and fluid (KMg) negatively correlates with Mg/Ca(Fluid) when it exceeds 0.5 mol/mol; no systematic correlation was observed when 0.05< Mg/Ca(Fluid)<0.5 mol/mol.

Histological analysis of long bone thin sections is commonly used to infer growth rates and ecology of extinct vertebrates, particularly within Archosauria. However, most comparative neontological studies have used small samples of captive individuals, limiting the scope of variation. To fill this gap, 44 femoral thin sections of wild Alligator mississippiensis were prepared and analyzed. Comparison of slides revealed that larger individuals from cooler climates tend to show more LAGs compared to southerly A. mississippiensis of similar size, however, there is considerable variation. This pronounced variation in wild specimens emphasizes the need to use caution when interpreting paleohistological data with little modern comparative samples. Finally, thin sections of early Pliocene Alligator sp. fossils from the Gray Fossil Site (GFS), Washington Co., Tennessee were prepared. The GFS Alligator grew more slowly than A. mississippiensis examined and may have reached reproductive maturity at smaller sizes.

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Data from three long-term field studies with loblolly pine (Pinus taeda L.) plantations were used to examine inequality (Gini coefficient) trends in diameter and the relationship between diameter relative growth rate (r) and initial size. Analysis with two spacing studies shows inequality increases with increasing density. For a given initial density, inequality initially decreases and then begins to increase as trees compete for resources. The slope of the linear relationship between r and relative size also increases with increasing density. The slope is initially negative and switches to positive as competition intensifies. The switch in the slope of the r/size relationship occurs when the crown projection area exceeds 1.05 or when the crown ratio falls below 0.75. These results are consistent with the resource pre-emptive or dominance/suppression theory of intra-specific competition. The r/size trends are not evident when calculations are based on class means as opposed to individual trees. The slope of the r/size relationship is a function of stand height, density, and to a lesser extent, site quality. Density reduction through mid-rotation thinning tends to decrease the slope coefficient. The r/size trends are used to develop a disaggregation model to distribute stand-level basal area growth over an initial tree list. This approach compares well with two other disaggregation models but tends to over predict growth on the largest trees. / Ph. D.

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Growth rate and flowering time are agriculturally important traits that are linked to fitness, productivity and reproductive success of plants. To study the genetic basis for natural variation in growth rate and flowering time between local accessions of Arabidopsis thaliana, hybrids were produced between fast growing / late flowering and slow growing / early flowering parents. F3 and F5 hybrid families were grown under a range of conditions – under a constant controlled environment, outside over the winter and outside in spring and early summer. Growth rates were estimated from repeated images of rosettes. Flowering time, as number of leaves to flower, was also recorded both in control and natural conditions for F5 lines. Damage by slugs and stress-induced production of anthocyanin pigments were also recorded for plants grown outside. Broad-sense heritability estimates were higher for F5 families than F3, in which more loci will segregate, and ranged from 48% to 89%. No significant correlation between growth rates under different environments was observed in most cases for F3 populations, however significant correlations were detected for F5 families outside and under controlled conditions, suggesting that same genes can affect growth rate in more than one environment. The genotypes of F3 families were determined at thirty-nine SSLP (simple sequence length polymorphism) loci and used in regression with phenotype data to search for quantitative trait loci (QTL). Significant QTLs were detected in F3 families for growth rate, flowering time and anthocyanin production, but not for herbivore damage. To confirm QTL detected in the F3 and to detect additional loci, bulk segregant analysis was carried out in F5 families grown under different conditions. Potentially linked markers were tested further in individual F5 plants and QTL mapped on a finer scale in F5 families that remained heterozygous for candidate regions. VIP5 and LDL1 were selected as potential candidate genes for flowering time variation. These genes were sequenced for two parental alleles. A transposon insertion and 5’ UTR deletion were found in the LDL1 allele from the late flowering parent and SNPs (single nucleotide polymorphisms) were observed throughout the gene. However both alleles appeared to be expressed at similar levels. Transgenic lines have been produced carrying the LDL1 allele from the early flowering parent (4D1) in the background of the later flowering parent (11C1). This work is on-going and will hopefully reveal whether LDL1 underlies differences in flowering behaviour seen between 11C1 and 4D1.