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Orientador: Claudia Regina Bonini-Domingos / Banca: Paulo César Naoum / Banca: Carlos Roberto Ceron / Banca: Luiz Carlos de Mattos / Wilson Araújo da Silva Júnior / Doutor

Made available in DSpace on 2014-06-11T19:26:05Z (GMT). No. of bitstreams: 0 Previous issue date: 2005-08-29Bitstream added on 2014-06-13T20:33:44Z : No. of bitstreams: 1 ondei_ls_me_sjrp.pdf: 1659909 bytes, checksum: 0234670a460d2993f23cb77243c91e66 (MD5) / As hemoglobinas (Hb) variantes, originadas em sua maioria por simples substituições de aminoácidos, resultam de mudanças na seqüência de nucleotídeos. Atualmente, o número de Hb anormais identificadas tem aumentado devido à melhoria nas metodologias de análises, porém muitos laboratórios de rotina não estão preparados para a correta identificação dos mutantes. A Hb S é uma variante de Hb bem caracterizada que apresenta prevalência variável nas diferentes regiões do Brasil. No entanto, há uma variedade de Hb que apresenta padrão de migração eletroforética semelhante ao da Hb S em pH alcalino as quais são denominadas “Hb S-like”, podendo ser erroneamente diagnosticadas e com suas freqüências subestimadas. Neste trabalho foram estabelecidos os valores referenciais de Hb por HPLC em portadores de Hb S e determinados os perfis eletroforético e cromatográfico das Hb “S-like” dentre as amostras enviadas ao LHGDH. Foram encontradas as Hb Hasharon, Hb D-Los Angeles, Hb Korle-Bu, Hb Lepore, Hb D-Iran, Hb tipo G, Hb Queens, Hb Montgomery e Hb Q-Índia. Também foram encontrados casos de associação entre dois mutantes de cadeia beta. As eletroforeses em pH alcalino e pH ácido foram utilizadas para o rastreamento inicial das Hb variantes e as eletroforeses de cadeias polipeptídicas em ambos pH foram realizadas para a identificação da cadeia globínica alterada. As análises cromatográficas permitiram o direcionamento dos prováveis mutantes, sendo também possível a quantificação precisa das frações de variantes. Desta forma, a associação de metodologias laboratoriais clássicas de diagnóstico é fundamental para o levantamento das suspeitas fenotípicas. Os perfis da Hb S e das Hb “S-like” estabelecidos neste estudo auxiliarão no diagnóstico dessas Hb variantes em serviços de saúde. / The variants hemoglobin (Hb) originated mainly by simple amino acid substitutions, result of nucleotides sequences changes. Currently, the number of abnormal hemoglobin identified has increased due to improvement in the analysis methodologies, but many routine laboratories are not prepared for the correct mutants identification. The Hb S is a variant Hb well characterized that shows variable prevalence in different regions of Brazil. However, there is a diversity of Hb that present electrophoretic migration on alkaline pH similar to Hb S, named Hb S-like, which can be incorrectly diagnosed and with their frequencies underestimated. At the present study the reference ranges for Hb S obtained by HPLC were established, and the electrophoretic and cromatographic profile for Hb S like were determined. The Hb Hasharon, Hb D-Los Angeles, Hb Korle-Bu, Hb Lepore, Hb D-Iran, Hb tipo G, Hb Queens, Hb Montgomery e Hb Q-Índia were found. Cases of association between two mutants of beta chain were also found. The electrophoresis on alkaline pH and acid pH were utilized to the initial screen of these variants Hb and the globin chains electrophoresis in both pH were performed to identify the mutant globin chain. The chromatographic analysis permitted the identification of the likely variant hemoglobin and also facilitated the exact quantification of variants. Therefore, the association of the classical laboratory methods of diagnostic is fundamental for the identification of variant Hb suspect. The Hb S and Hb S-like profile determined in this study will help in the diagnostic of these variants Hb in healthy service.

Orientador: Claudia Regina Bonini Domingos / Banca: Ivan de Lucena Angulo / Banca: Carlos Roberto Ceron / Resumo: As hemoglobinas (Hb) variantes, originadas em sua maioria por simples substituições de aminoácidos, resultam de mudanças na seqüência de nucleotídeos. Atualmente, o número de Hb anormais identificadas tem aumentado devido à melhoria nas metodologias de análises, porém muitos laboratórios de rotina não estão preparados para a correta identificação dos mutantes. A Hb S é uma variante de Hb bem caracterizada que apresenta prevalência variável nas diferentes regiões do Brasil. No entanto, há uma variedade de Hb que apresenta padrão de migração eletroforética semelhante ao da Hb S em pH alcalino as quais são denominadas "Hb S-like", podendo ser erroneamente diagnosticadas e com suas freqüências subestimadas. Neste trabalho foram estabelecidos os valores referenciais de Hb por HPLC em portadores de Hb S e determinados os perfis eletroforético e cromatográfico das Hb "S-like" dentre as amostras enviadas ao LHGDH. Foram encontradas as Hb Hasharon, Hb D-Los Angeles, Hb Korle-Bu, Hb Lepore, Hb D-Iran, Hb tipo G, Hb Queens, Hb Montgomery e Hb Q-Índia. Também foram encontrados casos de associação entre dois mutantes de cadeia beta. As eletroforeses em pH alcalino e pH ácido foram utilizadas para o rastreamento inicial das Hb variantes e as eletroforeses de cadeias polipeptídicas em ambos pH foram realizadas para a identificação da cadeia globínica alterada. As análises cromatográficas permitiram o direcionamento dos prováveis mutantes, sendo também possível a quantificação precisa das frações de variantes. Desta forma, a associação de metodologias laboratoriais clássicas de diagnóstico é fundamental para o levantamento das suspeitas fenotípicas. Os perfis da Hb S e das Hb "S-like" estabelecidos neste estudo auxiliarão no diagnóstico dessas Hb variantes em serviços de saúde. / Abstract: The variants hemoglobin (Hb) originated mainly by simple amino acid substitutions, result of nucleotides sequences changes. Currently, the number of abnormal hemoglobin identified has increased due to improvement in the analysis methodologies, but many routine laboratories are not prepared for the correct mutants identification. The Hb S is a variant Hb well characterized that shows variable prevalence in different regions of Brazil. However, there is a diversity of Hb that present electrophoretic migration on alkaline pH similar to Hb S, named Hb S-like, which can be incorrectly diagnosed and with their frequencies underestimated. At the present study the reference ranges for Hb S obtained by HPLC were established, and the electrophoretic and cromatographic profile for Hb S like were determined. The Hb Hasharon, Hb D-Los Angeles, Hb Korle-Bu, Hb Lepore, Hb D-Iran, Hb tipo G, Hb Queens, Hb Montgomery e Hb Q-Índia were found. Cases of association between two mutants of beta chain were also found. The electrophoresis on alkaline pH and acid pH were utilized to the initial screen of these variants Hb and the globin chains electrophoresis in both pH were performed to identify the mutant globin chain. The chromatographic analysis permitted the identification of the likely variant hemoglobin and also facilitated the exact quantification of variants. Therefore, the association of the classical laboratory methods of diagnostic is fundamental for the identification of variant Hb suspect. The Hb S and Hb S-like profile determined in this study will help in the diagnostic of these variants Hb in healthy service. / Mestre

Bakgrund: Glykerat hemoglobin i blod (B-HbA1c) speglar den genomsnittliga blodsocker-nivån de senaste 8 till 12 veckorna. B-HbA1c används för att följa behandlingen vid diabetes mellitus. B-HbA1c kan mätas på olika sätt och mätresultaten kan ibland skilja sig åt. I detta arbete har en ny immunkemisk metod, HbA1c Advanced (Beckman Coulter, USA) (AU-metoden) utvärderats.   Metod: Med patientprover och kontroller, dubbelprover, beräknades imprecision och bias samt korrelation med laboratoriets ordinarie jonbyteskromatografiska metod, Tosoh G11 (G11-metoden).   Resultat: Imprecision inomserie blev <3 %, total imprecision 5 %, och bias var -2,8 till -5,3 %. AU-metoden gav i medeltal 2,5 mmol/mol (3,9 %) lägre värde än G11-metoden med en korrelationskoefficient på 0,9967. AU-metoden mätte korrekt de vanligaste hemoglobin-varianterna men inte en patologisk ökning av fraktionen HbF.      Slutsats: AU-metodens precision och bias uppfyller nationella kvalitetsmål och korrelationen med laboratoriets ordinarie metod är god för såväl prover utan som med de vanligare hemo-globinvarianterna. Som förväntat för immunkemiska metoder ger AU-metoden för lågt värde vid uttalad ökning av HbF.   AU-metoden fungerar så väl som en immunkemisk metod kan göra och bedöms vara lämplig för kliniskt bruk för att mäta B-HbA1c. / Background: Glycated hemoglobinin blood (B-HbA1c) reflects the average blood sugar level over the last 8 to 12 weeks. B-HbA1c is used to monitor the treatment of diabetes mellitus. B-HbA1c can be measured in different ways with eventual results that sometimes differ from each other. During this project, a new immunochemical method, HbA1c Advanced (Beckman Coulter, USA) (AU method) was evaluated.   Methods: With patient samples, precision and bias were calculated as well as correlation with the laboratory's ordinary ion exchange chromatographic method, Tosoh G11 (G11 method).    Results: Imprecision in-series was <3 %, total imprecision was 5 %, and bias was -2.8 to -5.3  %. On average, the AU method gave values that were lower than the G11 method (2.5 mmol/mol (3.9 %) with a correlation coefficient of 0.9967. The AU method correctly measured the most common hemoglobin variants but not a pathological increase in the HbF fraction.   Conclusion: The precision and bias of the AU method fulfill the national quality objectives and the correlation with the laboratory's ordinary method, the G11 method is good for samples both with and without the most common hemoglobin variants. As expected for immunochemical methods, the AU method gives too low a value for samples with a pronounced increase in HbF.    In conclusion, the AU method fulfills the quality goals as is expected for an immunochemical method for measuring B-hbA1c and is concidered appropriate to use in clincical work.

L’analyse protéomique par spectrométrie de masse s’est imposée comme une méthode incontournable pour la caractérisation des protéines. Grâce aux progrès de l’instrumentation et de la bioinformatique, l’interprétation automatisée des spectres MS/MS permet aujourd’hui d’identifier des milliers de protéines dans un type cellulaire. Cependant, cette méthodologie s’applique encore difficilement aux organismes dont les génomes n’ont pas été séquencés, et donc pour lesquels il n’existe pas de banques de séquences peptidiques de référence. Notre travail a porté sur le développement et l’application d’une méthodologie d’interprétation des données MS/MS pour les organismes à génomes non séquencés. Cette méthodologie est basée sur le séquençage de novo suivi de recherche MS-BLAST. Ainsi nous avons pu : Identifier les différents partenaires de complexes protéiques tels que les protéines des complexes TgGAP50, TgAlba, TgSORTLR impliqués dans la motilité, la virulence ou le trafic intracellulaire des protéines du parasite Toxoplasma gondii, Identifier et caractériser des variants d’hémoglobine humaine, Identifier les protéines différentiellement exprimées lors des interactions vigne et champignons à génomes non séquencés dans la maladie de l’esca, Caractériser finement la N-glycosylation de l’invertase vacuolaire du raisin. Nous avons pu réaliser nos études sur des échantillons d’origines très différentes : homme, plantes, champignons, parasites et nous avons apporté des éléments de réponses moléculaires aux questions biologiques. / The proteomic analysis by mass spectrometry is now an essential method for the characterization of proteins. Thanks to advances in instrumentation and bioinformatics, automated interpretation of MS/MS spectra can now identify thousands of proteins in a cell type. However, this methodology remains poorly applied to the organisms that genomes are not sequenced and therefore where there is no database of reference for peptides sequences. Our work has focused on the development and application of a methodology for the interpretation of MS/MS data for the organisms that genomes are not sequenced. This methodology is based on the de novo sequencing followed by MS-BLAST search. Thus we have: Identify different partners of protein complexes such as proteins TgGAP50, TgAlba and TgSORTLR complex, involved in motility, virulence or intracellular protein trafficking of Toxoplasma gondii, Identify and characterize human hemoglobin variants, Identify the proteins differentially expressed during interaction of vines and fungi that genomes are not sequenced in esca disease, Finely characterize the N-glycosylation of the grape vacuolar invertase. We have achieved our studies on samples of very different origins: human, plants, fungi, parasites, and we provided evidence of molecular responses to biological questions.